Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1361g00005 ATGGATTCGATGGACATCGTGGGGAAATCAAAGGAAGACGCTTCCCTTCCTAAAGCAACTATGACAAAAATTATTAAAGAGATGCTACCCCCTGATGTACGTGTCGCAAGAGATGCACAAGATCTATTGATTGAATGCTGTGTAGAGTTCATAAACCTTGTATCATCAGAGTCCAATGAAGTCTGTAATAGAGAGGATAAACGGACAATTGCACCAGAGCATGTATTGAAGGCTTTACAGGTTCTTGGATTTAGTGAGTACATTGAGGAAGTTTACGCAGCATATGAGCAGCATAGGATCGAGACCATGGACTCTTTAAGAGCTGGCAAGTGGAGCAATGGAGCCGATATGACTGAGGAGGAAGCATTGCTGGAGCAGCAAAGGATGTTTGCAGAGGCGCGTGCTAGGATGAACGGTGGGGCCGTTGCTTCCAAGCAGCCAGATGCTGACCAAACTTTAGATAGCTAA 468 0.4509 MDSMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNEVCNREDKRTIAPEHVLKALQVLGFSEYIEEVYAAYEQHRIETMDSLRAGKWSNGADMTEEEALLEQQRMFAEARARMNGGAVASKQPDADQTLDS 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1361g00005 155 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 14 79 IPR003958 -
Pral1361g00005 155 MobiDBLite consensus disorder prediction 136 155 - -
Pral1361g00005 155 Gene3D Histone, subunit A 4 143 IPR009072 GO:0046982
Pral1361g00005 155 PANTHER PROTEIN DR1 HOMOLOG 1 154 IPR044255 -
Pral1361g00005 155 FunFam Negative cofactor 2 beta 6 142 - -
Pral1361g00005 155 SUPERFAMILY Histone-fold 12 142 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1361g00005 Pral-Chr1361 21530 24874 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1361g00005 1 152 CCAAT-DR1 Transcription Factor Family AT5G23090 84.314 1.45e-91 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Pral1361g00005 CBFD_NFYB_HMF 3.8e-22 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1361g00005 K21751 - gmx:100807912 282.722