Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1357g00010 ATGGACAATAGTGGCAGCAGAGCCGAAGCCGAACGGTGGCTCTACACCGCCAATAAGCTCCTCAGTGCACGTGATCTGCACGGGGCTAGGTCTTTCGCGGTTCGAGCCCGTGAGTCCGATCCCACATTTGACGCTTCTGAGTTGCTGCTCGCTGTCATCGATACCCTCCTTGCCGGTGAGACTCAGATCAATGGCCTCCATGATTGGTATAGCATCCTCCAGATTCTGCCTTATACTCACAATATCGAGTACATCGCCTCCCAGTACCGTCGTCTCGCTCTCCTCCTTGACCCTCATCGTAACCCTTTTGCGTTTTCTAGCCATGCGTTCACGCTCGTTCATGACGCGTGGTCTGTACTCTCCAATCCAGCTAAGAAGGCTATGTACGATAACGAGCTGCGATTGGTCACCGCCCCTCCTCCTGCGGCCCCTCCCCCGCAGACTGTTCCGGTGGCAACGGTTCATGCACCGGACCCGGTTCCGACTCCGAACCCAACTCCGATGCCTAATCCACCCTTTGTTCAGCGGCAACAGCAGCAGCAGCGAACTCCGGCGAAGAGGGGCCCGAAGCCCAAAGAGAGGGCTGGTGCCGGAGAACAAAGGCCGAGTCCTAACATTGCGACGACGGGGACGACCTCGCAAGCTCGGACGAGCGACCCGGTTGAGTCTGAAACCGGTTCGAGTTTCTGGACGGCGTGCCCGTACTGTTACGTTATGTATGAGTACCCGACGTTGTACGAGGACTGTACTCTAAGGTGCCAGAGCTGTAGAAGGGGATTTCATGCGGTGAAGGTGCGGACGCCGCCGGTGGCGGGGAAAGATTCGTATTATTGCTGTTGGGGGTTTTTCCCGTTAGGGTTTTCAGGGGATTTCAAAGACATAAGTGGGACTAATTCCAAGTGGAACCCATTTTCTGCAATGTTTGCATGCCCTTTGAGAGGAGGAGGAGGAGGAAGGGGATCTCAGAAAGGACCTTGGGTTTATCATGATGATGAAGCTGCTGCTGCATTCATTGAATTTTCTGAGCCAAGTGATGATGATTCGGATGATGCTGACTGGGGAGAGAGGGATGAGAGGGCGAGGAAGAGGGCTAAGAACAAAGCAAGAAGCTCTGGTAATGCTAGTGGTGGTGATGCAAGAAGGGCATTTTCTGAAAGAACTAGGAGAGGGAGCCAGAGTGGGTCCGGACATGCCAATTTAGAAAATGGTGTGATTGGAGACGGTGGGTCTGGTGCGCCAAATACTGTGAGGGCGGAGTTGAGTAAAAAAGCTGCAAATAGCTCGAGAAGAAGGGGTGCAGGGAATCTGGGGAAATTGGATTTGAATGTGGAGTTTAGTAATGAGGTGGAAGAGCCGGCCCCGGCAGTAAGAGATGGTAATGTGGCTGGAAATGCTGAGGAGAATATAGAAGGGAATGCATTTTTTGAGGGTCTTGATGAATTCCTTAACAGCTTGCCCATTCTCAATGTTGTGGCAGATGACAAGAATCTCATTGTCTAG 1500 0.528 MDNSGSRAEAERWLYTANKLLSARDLHGARSFAVRARESDPTFDASELLLAVIDTLLAGETQINGLHDWYSILQILPYTHNIEYIASQYRRLALLLDPHRNPFAFSSHAFTLVHDAWSVLSNPAKKAMYDNELRLVTAPPPAAPPPQTVPVATVHAPDPVPTPNPTPMPNPPFVQRQQQQQRTPAKRGPKPKERAGAGEQRPSPNIATTGTTSQARTSDPVESETGSSFWTACPYCYVMYEYPTLYEDCTLRCQSCRRGFHAVKVRTPPVAGKDSYYCCWGFFPLGFSGDFKDISGTNSKWNPFSAMFACPLRGGGGGRGSQKGPWVYHDDEAAAAFIEFSEPSDDDSDDADWGERDERARKRAKNKARSSGNASGGDARRAFSERTRRGSQSGSGHANLENGVIGDGGSGAPNTVRAELSKKAANSSRRRGAGNLGKLDLNVEFSNEVEEPAPAVRDGNVAGNAEENIEGNAFFEGLDEFLNSLPILNVVADDKNLIV 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1357g00010 499 Gene3D DnaJ domain 65 138 IPR036869 -
Pral1357g00010 499 CDD PHD_SF 233 278 - -
Pral1357g00010 499 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 375 - -
Pral1357g00010 499 SUPERFAMILY Chaperone J-domain 61 133 IPR036869 -
Pral1357g00010 499 MobiDBLite consensus disorder prediction 138 172 - -
Pral1357g00010 499 SMART dnaj_3 67 125 IPR001623 -
Pral1357g00010 499 ProSitePatterns Nt-dnaJ domain signature. 110 129 IPR018253 -
Pral1357g00010 499 MobiDBLite consensus disorder prediction 202 227 - -
Pral1357g00010 499 MobiDBLite consensus disorder prediction 138 227 - -
Pral1357g00010 499 CDD DnaJ 68 122 IPR001623 -
Pral1357g00010 499 ProSiteProfiles dnaJ domain profile. 68 133 IPR001623 -
Pral1357g00010 499 Pfam DnaJ domain 68 130 IPR001623 -
Pral1357g00010 499 MobiDBLite consensus disorder prediction 339 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1357g00010 Pral-Chr1357 60145 63467 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1357g00010 9 495 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 39.053 4.94e-98 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1357g00010 - - pcin:129296576 833.172