Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1354g00010 ATGGCAGACAACGTGGACCCTGTGACTTCAAACCTTCTGTGTCCGGAAAACAGCAATACATGCTTTGACAATTCCGAATGTAATACCGAGGATGAGTTTGGAATTTCTTTTAACCAGCAAAACGATAAGGGACGTCATCATTGTCCGCCTTGGGATAGCCATGGATCCGTGCGTTTTCCGATTCAGAGTGATGAAAGAGTCAGACTAATGGTTGAGAGGGAGAAGGAGCATTTGCCCAGAAATGATTACCTGAAGAGGCTGCGTAGTGGAGACCTGGAGTTGAGTGTTAGGAGGGAGGCCCTTGATTGGATTCTGAAGGCTCATGCTTATTATGGTTTTGGCCCGTTGAGCTTTTGTCTATCTGTGAACTACTTGGATCGATTCCTATCAATACATGAGTTGCCTAGAGGCAAATCCTGGACCGTGCAATTGCTAGCTGTGGCTTGTTTGTCACTGGCAGCCAAAATGGAGGAGATTGAAGTGCCTCTCTTAGTAGATTTACAGGTTGGAGAACCAAAGTATGTGTTTGAAGCTAAAACCATTGAAAGAATGGAGCTACTAGTGTTAAGCACATTGAGATGGAAAATGCACGCTTTAACTCCTTGTTCCTTCATAGACTACTTCCTCAATAAACTTACTACCGGGAAACATCCAACAAATTCATCCATTTCAAGATCAATACAGCTCATAGTTGGCACAATTAGGGGTATTGACTTCTTGGACTTCATGCCTTCTGAAATTGCTGCAGCAGTGGCCATTTCTGTTGCAAAGGAACTGCAAACAATTGAGATTGACAAGGTCGTCTCTGGTTTAATGATGGAGGAAAAGAGAGTTCTCAAGTGTCTTGAACTGATAAGAGACTTGTCCTTGACGAGTTTTTCTGCAAGTATGAGCAGAAACTTAATGCCATTGGTGCCCCAGAGCCCAGATGGAGTGCTGGATGCTGCATGCTTGAGCTACAAAAGTGATGAATTAACTGTTGGGTCATATCAAAACTCTTCACAAAATACTTGTAATGCTAAGAGGACCAAATCAGACAGACCTTCTTCTGATGGGACTTTCAAGTCATAA 1071 0.4314 MADNVDPVTSNLLCPENSNTCFDNSECNTEDEFGISFNQQNDKGRHHCPPWDSHGSVRFPIQSDERVRLMVEREKEHLPRNDYLKRLRSGDLELSVRREALDWILKAHAYYGFGPLSFCLSVNYLDRFLSIHELPRGKSWTVQLLAVACLSLAAKMEEIEVPLLVDLQVGEPKYVFEAKTIERMELLVLSTLRWKMHALTPCSFIDYFLNKLTTGKHPTNSSISRSIQLIVGTIRGIDFLDFMPSEIAAAVAISVAKELQTIEIDKVVSGLMMEEKRVLKCLELIRDLSLTSFSASMSRNLMPLVPQSPDGVLDAACLSYKSDELTVGSYQNSSQNTCNAKRTKSDRPSSDGTFKS 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1354g00010 356 SUPERFAMILY Cyclin-like 59 197 IPR036915 -
Pral1354g00010 356 Gene3D - 70 282 - -
Pral1354g00010 356 Pfam Cyclin, C-terminal domain 200 290 IPR004367 -
Pral1354g00010 356 MobiDBLite consensus disorder prediction 329 356 - -
Pral1354g00010 356 FunFam D6-type cyclin 194 283 - -
Pral1354g00010 356 Pfam Cyclin, N-terminal domain 68 196 IPR006671 -
Pral1354g00010 356 FunFam D2/4-type cyclin 80 193 - -
Pral1354g00010 356 MobiDBLite consensus disorder prediction 329 343 - -
Pral1354g00010 356 ProSitePatterns Cyclins signature. 97 128 IPR006671 -
Pral1354g00010 356 PANTHER CYCLINS 64 287 IPR039361 -
Pral1354g00010 356 SMART cyclin_7 102 190 IPR013763 -
Pral1354g00010 356 Gene3D - 80 197 - -
Pral1354g00010 356 CDD CYCLIN_AtCycD-like_rpt1 96 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1354g00010 Pral-Chr1354 111399 114052 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1354g00010 62 265 Core Cell Cycle Gene Families AT5G65420 62.621 4.64e-94 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1354g00010 K18810 - qsa:O6P43_025224 442.58