Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1350g00004 ATGTCAACGCTCTCGCATCACTATCCTTCTCTTCTTCTTCCTCTTCTCCTGCTACTCAAATCCTTCACAACCCCAATGTCTTCCTCATCCACACAGGCTTTCATCTTTGGCCGTTGCTCTCAGGCTAAGTTCACGCCGGGCTCTGCCTATGAGTCTACCGTCAACTACCTTCTCGCTTCCATCGTCAAAGCCGCCATGTTCTCCTCCTACAACAACCTCACCGTCCCTCACTCCTCACAGGACACCCCCATATGCGGCCTTTTCCAGTGTCGCGGCGACCTTGCCGCTGCCGACTGCTCCCGCTGTGTTGGCCAGGCCGTCTCCCAGCTTGGCACTATCTGCCCCTACTACACCGGCGGTGCCTTGCAGCTCGACGGTTGTTTCGTTAAGTATGATGATTCCAAGTTCTTGGGCATGGAGGACAAGACTTTGGTGGTTGAGAAATGTGGGCCGACGACTGCATTGACTTCGGACGTGTTGACTCGGAGGGACGCTGTGCTCTCGTATTTGGAAACGTCCGATGGGGTGTACAAGACGTTTAGAACGACTAGCTCAGGGGATTTGCAGGGCATGGCACAGTGCGTAGGGGATTTGAGTGCACCCCAGTGCCAGGATTGCCTCTCAAACGCGATCGGACGGCTAAGAGAAGAGTGTGGGCCTGCTCAGTGGGGTCGGGTATACTTGGCCAAGTGCTGTGCACGCTACTCTGAAGGTGGGGATTACTCGTCCGAAGAAAACGGTAAGCGTAAAAACAAGAACGGCGATGAATTTCAGAACACACAGGTAATAATAGTTGGTGTCATAGCAATCGTAGCAGTGGTGGCTCTGCTCATCATATTCATTTCATTCTTGGCCAAGCTGTGCAAAAGCAAAGAGGTGGTAATTCATGTGGAAAATAAACAAGAAACTCAGGTGGAAAACAAACAAGAAACTCAGGTGGAAATCAAACAAGAAACTCACGTGGAAAACAAGTACCCTCTCGTAATATTTCTAGTTCGGCTAATTCCTTGGTTTGCAGAAGATCCAGTCCCTTGTGATATTCCAGCAGGTTTTCATGCAGCAGCATCAGATTTAATTGCTGAGCCCCACCAAAATGTTCTGCAAAAGCACACTTACTTCTTCGACAGGAACCAGGACGGCGTCGTCTACCCCTGA 1155 0.5065 MSTLSHHYPSLLLPLLLLLKSFTTPMSSSSTQAFIFGRCSQAKFTPGSAYESTVNYLLASIVKAAMFSSYNNLTVPHSSQDTPICGLFQCRGDLAAADCSRCVGQAVSQLGTICPYYTGGALQLDGCFVKYDDSKFLGMEDKTLVVEKCGPTTALTSDVLTRRDAVLSYLETSDGVYKTFRTTSSGDLQGMAQCVGDLSAPQCQDCLSNAIGRLREECGPAQWGRVYLAKCCARYSEGGDYSSEENGKRKNKNGDEFQNTQVIIVGVIAIVAVVALLIIFISFLAKLCKSKEVVIHVENKQETQVENKQETQVEIKQETHVENKYPLVIFLVRLIPWFAEDPVPCDIPAGFHAAASDLIAEPHQNVLQKHTYFFDRNQDGVVYP 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1350g00004 384 ProSiteProfiles Gnk2-homologous domain profile. 32 136 IPR002902 -
Pral1350g00004 384 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 11 288 - -
Pral1350g00004 384 Gene3D - 151 238 IPR038408 -
Pral1350g00004 384 Gene3D - 31 136 IPR038408 -
Pral1350g00004 384 ProSiteProfiles Gnk2-homologous domain profile. 141 240 IPR002902 -
Pral1350g00004 384 Pfam Salt stress response/antifungal 166 236 IPR002902 -
Pral1350g00004 384 Pfam Salt stress response/antifungal 39 133 IPR002902 -
Pral1350g00004 384 FunFam cysteine-rich repeat secretory protein 3 31 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1350g00004 Pral-Chr1350 31805 41475 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1350g00004 5 235 Pollen Coat Proteome AT4G20670 25.391 6.39e-15 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1350g00004 - - gmx:100808107 331.257