Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1346g00007 ATGGCTTTCGATTCTAAAGATCAGAATCGTCTAAACGAAGAAGAAGATTCCTACGGTCTTTCTGCCATGCTTCAGTGTTGTAGCCAGACCTACTGTGCAGTTCTTAAAGCGTCCATTGAGCTCAACTTGTTTGAGATCATAGCTAAGGAAGGAGGACGATATGTGTCAGCCTCTGAAGTAGCTTCAAAGCTTCCAAGTTCATCTCAGCACAAAGATTTAGCTTTCAGAATCGATCGTCTCTTGAGGCTTCTTGCAAGTCACTCTCTTCTGAACTGTTCGTTTCGTGAGAAGGAAGATGGAGGCACTGAGAGGCTCTATGCCATTTCTCCTGTGGGAAAGTACTTCGTCGGTGGGGACGATAATGGCGGGTTCTTGGCTCTCTTCTCATCATTCATATGTCATAGGGCCCTCCTGGATGCCTGGATGAATTTTAAGGTTGCCATAATAGAAGAAGACAATGACTTATTCAAGAAAGTTCATGGAATGCCAATGTACCAATATGCAGAGATAGATCCAGCATGGAACAACATTTTCAACAAAGCAATGGCTAACCGCTGCAACGTAGAGATGAGAAGAATATTAGAAATATACAAAGGATTTGAAGGAACATCAACACTTGTTGACGTTGGAGGTGGCACTGGCCAAAACCTCAAAATGATTGTCTCCAAGTACCCTTCAATTAAGGGCATCAATTTTGATTTGCCCAATGTTGTTCAAAACGCACCACCTCATCCGGGAATGGAGCATGTTGGAGGGGATATGTTTGAGAGTGTTCCGAAAGGTGATGTCATTATGTTGAAGGCCGTATGCCACAATTGGTCAGATGAGAATAGCATAAAATTGTTGAGGAAGTGCCATGAAGCATTGAGAGATAAAGGGAAGGTGGTAGTGATTGAGTACATAATGCCTGAAGTAATTGACGCAACCGAAGAAGCCAAGTTCGTAGCAAGCTTGGACAACATCATGTTCCTTCATGATGGAAGAGAAAGAACTGAGAAGGAATTTCAATATCTTTGCAAATGTTCTGGCTTTTCTGCTTTCAAACTCGCTCTCGCTTCTCGTGCTTTCTCCGCTTTAGGAGTTATGGAATTCTACAAGTAA 1101 0.4269 MAFDSKDQNRLNEEEDSYGLSAMLQCCSQTYCAVLKASIELNLFEIIAKEGGRYVSASEVASKLPSSSQHKDLAFRIDRLLRLLASHSLLNCSFREKEDGGTERLYAISPVGKYFVGGDDNGGFLALFSSFICHRALLDAWMNFKVAIIEEDNDLFKKVHGMPMYQYAEIDPAWNNIFNKAMANRCNVEMRRILEIYKGFEGTSTLVDVGGGTGQNLKMIVSKYPSIKGINFDLPNVVQNAPPHPGMEHVGGDMFESVPKGDVIMLKAVCHNWSDENSIKLLRKCHEALRDKGKVVVIEYIMPEVIDATEEAKFVASLDNIMFLHDGRERTEKEFQYLCKCSGFSAFKLALASRAFSALGVMEFYK 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1346g00007 366 Pfam Dimerisation domain 34 85 IPR012967 GO:0046983
Pral1346g00007 366 Pfam O-methyltransferase domain 141 345 IPR001077 GO:0008171
Pral1346g00007 366 PIRSF O-mtase 1 366 IPR016461 GO:0008168
Pral1346g00007 366 PANTHER O-METHYLTRANSFERASE 32 353 IPR016461 GO:0008168
Pral1346g00007 366 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 23 366 IPR016461 GO:0008168
Pral1346g00007 366 FunFam Caffeic acid 3-O-methyltransferase 3 115 - -
Pral1346g00007 366 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 128 348 IPR029063 -
Pral1346g00007 366 SUPERFAMILY "Winged helix" DNA-binding domain 14 120 IPR036390 -
Pral1346g00007 366 FunFam Caffeic acid O-methyltransferase 119 366 - -
Pral1346g00007 366 CDD AdoMet_MTases 205 302 - -
Pral1346g00007 366 Gene3D Vaccinia Virus protein VP39 175 350 IPR029063 -
Pral1346g00007 366 Gene3D - 32 193 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1346g00007 Pral-Chr1346 64985 68288 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1346g00007 15 349 Monolignol Biosynthesis Gene Families AT5G54160 46.588 4.01e-106 314
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1346g00007 - - pcin:129312384 447.973