Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1346g00006 ATGGCTTTGGAGTGCAGAGAGAATCATCATAATAAGGATGAAGATGAAGATTCATATTGTCTTTCTGCAATGCATCTGTGTTGCAGTCAGATCTATTCTGCAGTTTTGAACGCAGCTCTTGAGCTCAACTTGTTTGAGATCATAGCTAAGGAAGGAGGACGACACGTGTCAGCCTCTGAAGTAGCTTCAAAGCTTCCAAGTTCATCTCAGCACAAAGATTTAGCTTTCAGAATCGATCGTCTCTTGAGGCTTCTTGCAAGCCACTCTCTTCTGAACTGTTCTTTTGGCGAGAAGGAAGATGGAGGCACTGAGAGGCTCTATGCGATTTCTCCTGTGGGAAAGTACTTTGTTGGTGGGGACGATAATGGCGGATTCTTGGCTCTCTTCTCATCATTCCTGTGTAATAGGGCACTCGTGGATGCCTGGTTGAATTTTAAGGATGCAATCATAGAGGAAGACAATGACTTGTTCAAGAAAGTTCATGGGATGCCAATGTACCAATACGCAGAGAAAGATCCAAAGTGGAACACTATTTTCAACAAAGCAATGGCCAATATTTGTAATATTGAGATGAAGAGAATATTGGAAATATACAAAGGATTTGAGGGAATATCAACACTTGTTGATATTGGTGGTGGCACTGGCCAAAACCTCAAAATGATCATCTCCAAATACCCTTCTATTGAGGCTATTAATTTTGATTTGCCCCAAGTCATTCAAAATGCTCAACCTCATCCAGGGATTGAGCATGTTGGAGGAGATATGTTTGAAGGTGTTCCAAAAGGTGATGCCATCATACTAAAGGCTGTATGCCACAATTGGTCTGATGAGAATAGCATTAAAGTATTGAGGAAATGCCATGAAGCATTGCCAGAGAAAGGGAAGGTGATAGTCATTGAGCTTTTAATGCCTGAAAAGATTGAAGCAACAGAAGAAACCAAGTTTGTGGCAAGCTTGGACAACCTCATGTTCCTTCATGATGGAAGAGAAAGAACTGTGAAAGAATTTGAGTCTCTTTGCAAACGTTCTGGTTTTTCTGCTTTCAAAGTTGCTTGTCGTGCTCTCTCTGTTCTTGGAGTCATGGAATTCCACAAATAA 1098 0.4117 MALECRENHHNKDEDEDSYCLSAMHLCCSQIYSAVLNAALELNLFEIIAKEGGRHVSASEVASKLPSSSQHKDLAFRIDRLLRLLASHSLLNCSFGEKEDGGTERLYAISPVGKYFVGGDDNGGFLALFSSFLCNRALVDAWLNFKDAIIEEDNDLFKKVHGMPMYQYAEKDPKWNTIFNKAMANICNIEMKRILEIYKGFEGISTLVDIGGGTGQNLKMIISKYPSIEAINFDLPQVIQNAQPHPGIEHVGGDMFEGVPKGDAIILKAVCHNWSDENSIKVLRKCHEALPEKGKVIVIELLMPEKIEATEETKFVASLDNLMFLHDGRERTVKEFESLCKRSGFSAFKVACRALSVLGVMEFHK 365
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pral1346g00006 365 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 131 361 IPR029063 -
Pral1346g00006 365 PANTHER O-METHYLTRANSFERASE 29 348 IPR016461 GO:0008168
Pral1346g00006 365 Pfam O-methyltransferase domain 142 346 IPR001077 GO:0008171
Pral1346g00006 365 FunFam Caffeic acid 3-O-methyltransferase 3 116 - -
Pral1346g00006 365 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 24 365 IPR016461 GO:0008168
Pral1346g00006 365 SUPERFAMILY "Winged helix" DNA-binding domain 15 121 IPR036390 -
Pral1346g00006 365 PIRSF O-mtase 1 365 IPR016461 GO:0008168
Pral1346g00006 365 Pfam Dimerisation domain 35 86 IPR012967 GO:0046983
Pral1346g00006 365 FunFam Caffeic acid O-methyltransferase 120 365 - -
Pral1346g00006 365 Gene3D - 3 116 IPR036388 -
Pral1346g00006 365 Gene3D Vaccinia Virus protein VP39 119 365 IPR029063 -
Pral1346g00006 365 CDD AdoMet_MTases 206 299 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pral1346g00006 Pral-Chr1346 53970 58103 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1346g00006 16 357 Monolignol Biosynthesis Gene Families AT5G54160 47.384 2.30e-110 325
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1346g00006 - - gmx:100784030 443.351