Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1346g00004 ATGCCAATGTACCAATACGCAGAGAAAGATCCAAAGTGGAACACTATTTTCAACAAAGCAATGGCCAATATTTGTAATATTGAGATGAAGAGAATATTGGAAATATACAAAGGATTTGAGGGAATATCAACACTTGTTGATATTGGTGGTGGCACTGGCCAAAACCTCAAAATGATCATCTCCAAATACCCTTCTATTGAGGCTATTAATTTTGATTTGCCCCAAGTCATTCAAAATGCTCAACCTCATCCAGGGATTGAGCATGTTGGAGGAGATATGTTTGAAGGTGTTCCAAAAGGTGATGCCATCATACTAAAGGCTGTATGCCACAATTGGTCTGATGAGAATAGCATTAAAGTATTGAGGAAATGCCATGAAGCATTGCCAGAGAAAGGGAAGGTGATAGTCATTGAGCTTTTAATGCCTGAAAAGATTGAAGCAACAGAAGAAACCAAGTTTGTGGCAAGCTTGGACAACCTCATGTTCCTTCATGATGGAAGAGAAAGAACTGTGAAAGAATTTGAGTCTCTTTGCAAACGTTCTGGTTTTTCTGCTTTCAAAGTTGCTTGTCGTGCTCTCTCTGTTCTTGGAGTCATGGAATTCCACAAATAA 612 0.3889 MPMYQYAEKDPKWNTIFNKAMANICNIEMKRILEIYKGFEGISTLVDIGGGTGQNLKMIISKYPSIEAINFDLPQVIQNAQPHPGIEHVGGDMFEGVPKGDAIILKAVCHNWSDENSIKVLRKCHEALPEKGKVIVIELLMPEKIEATEETKFVASLDNLMFLHDGRERTVKEFESLCKRSGFSAFKVACRALSVLGVMEFHK 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1346g00004 203 PANTHER O-METHYLTRANSFERASE 7 186 IPR016461 GO:0008168
Pral1346g00004 203 Gene3D - 2 32 IPR036388 -
Pral1346g00004 203 CDD AdoMet_MTases 44 137 - -
Pral1346g00004 203 Gene3D Vaccinia Virus protein VP39 14 192 IPR029063 -
Pral1346g00004 203 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 2 200 IPR029063 -
Pral1346g00004 203 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 203 IPR016461 GO:0008168
Pral1346g00004 203 Pfam O-methyltransferase domain 1 184 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1346g00004 Pral-Chr1346 38991 58103 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1346g00004 1 195 Monolignol Biosynthesis Gene Families AT5G54160 55.330 2.49e-79 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1346g00004 - - gmx:100802593 296.975