Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1345g00001 ATGGCTCTCGAACAAATTTCCCATCTTGCTTCCCCGGATGGTGATACTATGCAGCGAATTGCTGCCTATTTTACTGAAGCACTTGCTGATCGGATACTTAAAACATGGCCTGGTCTCCACAAGGCCCTCAATTCTACTAGAATAGTCATGGTTTCCGAAGAAATTCTGGTCCGGAAGCTGTTTTTTGAGCTGTTCCCATTCTTGAAGGTGGCGTTCGTGCTCACAAATCAGGCTATCATGGAAGCAATGGAAGGAGAGAAGATGGTTCATATAATTGATCTCAATGCTGCTGAACCTGCACAGTGGATTGCACTCCTCCAAGTTTTGAGTGCTCGGCCTGAAGGCCCTCCTCACTTGAGAATTACTGGGGTTCATCAACAGAAAGAGATTCTGGATCAGATGGCTCATAGGCTGATTGAAGAAGCAGAAAAGTTGGACATCCCATTCCAGTTCAATCCTGTTGTGAGCAAGTTAGAGAATCTTGATTTTGACAAACTCCGTGTGAAGACTGGAGAAGCACTAGCAATCAGTTCGATTGTCCAATTACATTCGCTTTTGACATTGGATGATGAATTGCGCAGAAGACCTCCTCTCCTAACAAAATGCTCAAATGGAAGTCATCTACAAAGAGCCGTGCCAATGAATCAGAGCTCATTAGGTGATTTGCTTGAGAAGGATATGATCAATAATAGGTACAGCCCAAGTCCTGACTCGACCTCATCATCCCCAGCATCGTCAATTGCTTCAATGAGCATGGAGAGCTTTCTCAATGCCTTGTGGGGTTTGTCTCCCAAAGTCATGGTTGTGACAGAACAAGACTCTAATCACAATGGTTCAACTCTAATGGAGAGGGTATTAGAAGCTCTGTACTCTTACGCAGCGTTGTTTGATTGTTTGGAATCCACAGTCTCAAGAACATCAATGGAGAGATTAAAGGTGGAGAAGATGCTTTTCGGTGAGGAAATCAAGAACATTGTTGCGTGTGAGGGAGCTGAAAGAAAGGAAAGGCATGAAAAGCTTGATAAGTGGCTACAGAGGCTTGATCTTGCCGGGTTTGGGAATGTGCCTTTAAGCTATTATGGGATGTTACAAGCAAGGAGATTACTACAGAGCTATGGCTGTGAGGGATACAAAATGAGGGAGGAAAATGGCTGTGTTGTTATTTGCTGGCAGGATAGGTCACTTTTTTCAGTATCAGCATGGAGACCTAGGAAGTAA 1218 0.4409 MALEQISHLASPDGDTMQRIAAYFTEALADRILKTWPGLHKALNSTRIVMVSEEILVRKLFFELFPFLKVAFVLTNQAIMEAMEGEKMVHIIDLNAAEPAQWIALLQVLSARPEGPPHLRITGVHQQKEILDQMAHRLIEEAEKLDIPFQFNPVVSKLENLDFDKLRVKTGEALAISSIVQLHSLLTLDDELRRRPPLLTKCSNGSHLQRAVPMNQSSLGDLLEKDMINNRYSPSPDSTSSSPASSIASMSMESFLNALWGLSPKVMVVTEQDSNHNGSTLMERVLEALYSYAALFDCLESTVSRTSMERLKVEKMLFGEEIKNIVACEGAERKERHEKLDKWLQRLDLAGFGNVPLSYYGMLQARRLLQSYGCEGYKMREENGCVVICWQDRSLFSVSAWRPRK 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1345g00001 405 ProSiteProfiles GRAS family profile. 1 402 IPR005202 -
Pral1345g00001 405 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 2 398 IPR005202 -
Pral1345g00001 405 Pfam GRAS domain family 2 402 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1345g00001 Pral-Chr1345 9076 10884 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1345g00001 2 405 GRAS Transcription Factor Family AT1G50420 71.638 0.0 596
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pral1345g00001 GRAS 1.3e-133 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1345g00001 - - tcc:18589932 658.292