Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1344g00005 ATGAAGCTCTTTAGTCTTTTGGTTTTATCCTTATCTTTCTTCTCTGTCATGGGACAGCTTCCTTCGCAGGACATCTTAGCATTGTTGGAATTTAAGAAAGGCATCAAGCATGACCCTACTGGTTATGTCCTCAATTCCTGGAATGAAGAATCCATTGACTTTAATGGATGCCCATCTTCATGGAATGGAGTTCTGTGTAATGGTGGTAATGTTGCTGGGGTTGTCCTAGATAGCCTGGGTCTCTCTGCTGAGGCAGACTTGAGTGTTTTTTCAAACCTCACAAAGCTTGTCAGGCTTTCTTTGTCCAACAATTCCATATCAGGAAGACTCCCTGACAACATAGCAGACTTCAGAAGTCTTCAATTTCTAGATGTGTCCAATAACCTTTTCTCTTCATCCATACCACAGGGAATCGGTAAGCTAGCTAGCTTACTGAACTTGTCATTGGCAGGGAACAATTTCTCTGGTCCAATTCCTGTCTCAATTGCGGGGATGTCATCAATCCAATCTTTGGACTTGAGCCGTAACTCCTTTTCTGGAACACTGCCAGCTTCTTTGACTAAGCTGAATAGCCTGGTATCTCTCAATTTGTCTCATAACAGCTTCACTGGAAAGATTCCCAAAGGTTTTGATCTGATGTCTGCTCTTGAAAAGGTTGACTTGCACGGAAATATGCTTGATGATCAACTAGATATTAAGTTTATGCTTTTAACAAGTGCCAGTTATGTTGATTTTAGTGATAACATGTTAGTGAGTTCTAACTCCCGGCAGCAGAGGTTTCTACCCCGAATCTCTGAAAGTATCAAGTATTTGAATTTAAGCCACAACCAGCTGATTGGATTGTTAGATAGTGAAGGTGAGCAGCCACTTTTTGAAGACCTGAAGGTGTTGGATCTTAGCTACAATCAATTGTCAGGAGAACTGCCTGAATTTGAATTTGTCTATGATCTCCAAGTCCTCAGGCTTAGCAACAACAGATTTTCAGGATTTCTTCCAACTGGCCTGCTCAAGGGAGACCCTTTGGTTATAACCGAACTTGATTTGAGTGCCAACAACCTCTCAGGGTCAATAGGGTTGATCACATCAACAACATTGCGCTCTTTGAATCTCTCATCAAATGGTTTCACTGGTGAGCTGCCACTTCTAACAGGGAGCTGTGCGGTTCTTGATCTTTCAAATAACAAACTAGAAGGGAATCTATCCAGGATGGTAAAATGGGGAAATATAGAATTTCTTGATCTCAGTAGAAATCATTTGACAGGGCCCATTCCTGAGGAAACTCCTCAGTTTTTACGATTGAATTATCTGAACTTCTCCCATAATGATCTTAGCGGCTTCCTCCCCAGAGTCTTAATGCAGTATCCGAAGCTAAGAGTGCTCGATGTTAGTTCCAACGAGTTAGATGGACAGCTTCCTGATAAGCTGCTTGCTATGACAACTTTGCAAGAGCTTCATCTTGAAAATAATTTCATTTCAGGTGGCATTAATTTATCATCTTCCCCTGGTGAATCTGATCTTCAGATTCTTGATCTTTCTCACAACCAATTTAACGGGTACTTTCCTGAAATTTTTGGATCATTAACTGGCCTGAAAGTACTCAATATTGCTGGAAATAATTTTTCTGGTTCTCTTCCAACTGCCATTGGTATGAGTTCATTAGATTCGTTGGATATATCAGATAATCATTTTACAGGTCCATTACCAACTGACCTGCCAAAGGGACTAGAAAACTTTAATGCTTCATACAATGATCTGTCTGGTATTGTCCCAGAAAATCTTAGGAAGTTCCCCAGTTCTTCTTTCTATCCTGGGAATGCTAGGTTACGTTACCCAAATGGTCCTCCTGGATCAACCAATATGCCTGCTGAAGGTTCAAAGAAGAAGCCTATGAGCACTATCATTAAAGTAATAATTATAGTATCATCTGTGGTTGCGCTATTCATAGTAATCCTGCTTGCAATCTTCATACATTACGTACGCATTTCAAGATCTCCACCAGAATATGCTGCTAGTAAGGACATACATGGGCGTGCTCAACAAAACTTACCTGGCACAGGCCGTGCAACAGATAGGGGTGGTGCTTTGGTTGTATCAGCTGAGGATCTTGTGACCTCAAGGAAAGGATCGTCTTCAGAGATAATCAGCCCAGATGAAAAATTGGCAGCCACTGCTATGTCCCCATCAAAAAACAGCCACTTCTCCTGGTCACCAGGGTCTGGTGATTCATTCACTGCTGAAAATTTTGCAAGACTTGATGTGAGATCACCTGATAAGTTAATAGGCGAGCTGCATTTTCTTGATGATGCAATAACGTTGACCCCCGAGGAGCTGTCAAGGGCCCCTGCTGAGGTTTTGGGGAGAAGCAGTCATGGAACTTCTTATAAGGCTACTCTAGAGAATGGCTTGTTGCTGAGAGTGAAGTGGTTGAGAGAAGGAGTGGCTAAACAGAGGAAAGAATTTGCTAAAGAGGCTAAAAAGTTTTCAAACATCAGGCATCCAAATGTTGTGGGACTGAGAGGATATTATTGGGGTCCTACGCAGCATGAGAAGCTTATTCTTTCAGACTACATTTCTCCTGGAAGTCTTGCAACTTTTCTTTATGATCGACCAGGAAGAAAAGGCCCACCGTTAACCTGGGCCCAGAGACTGAAGATAGCAGTTGATGTAGCACGTGGCCTGAACTATCTCCACTTTGATCGCGCCGTTCCTCATGGGAACCTCAAGGCAACAAATGTGCTGTTAGATACACCCGATTTGAATGCAAGAGTTGCTGATTATTGCCTTCATCGGCTTATGACTCAGGCAGGTACTACCGAACAGATTCTTGATGCTGGGGTTTTGGGATATCGTGCGCCAGAGTTAGCTGCTTCCAAAAAACCAACACCCTCCTTTAAATCAGATGTTTATGCTTTTGGAGTGATACTCTTGGAACTTTTAACTGGAAGATGCGCTGGTGATGTGATATCTGGTGAGGATGGAGGTGTTGATATGACTGATTGGGTGAGGTTGCGGATGGCAGAAGGTCGAGGATCAGAATGTTTTGATGCTGCGTTGATGCCAGAAATGGGAAATCCAACTGCAGAAAAGGGGATGAAGGATTTCCTAGGAATAGCCCTAAGATGCATTCGGTCTGTTTCTGAGAGGCCAGGTATCAAGACAATATATGAAGACCTTTCATCTATATAG 3186 0.4253 MKLFSLLVLSLSFFSVMGQLPSQDILALLEFKKGIKHDPTGYVLNSWNEESIDFNGCPSSWNGVLCNGGNVAGVVLDSLGLSAEADLSVFSNLTKLVRLSLSNNSISGRLPDNIADFRSLQFLDVSNNLFSSSIPQGIGKLASLLNLSLAGNNFSGPIPVSIAGMSSIQSLDLSRNSFSGTLPASLTKLNSLVSLNLSHNSFTGKIPKGFDLMSALEKVDLHGNMLDDQLDIKFMLLTSASYVDFSDNMLVSSNSRQQRFLPRISESIKYLNLSHNQLIGLLDSEGEQPLFEDLKVLDLSYNQLSGELPEFEFVYDLQVLRLSNNRFSGFLPTGLLKGDPLVITELDLSANNLSGSIGLITSTTLRSLNLSSNGFTGELPLLTGSCAVLDLSNNKLEGNLSRMVKWGNIEFLDLSRNHLTGPIPEETPQFLRLNYLNFSHNDLSGFLPRVLMQYPKLRVLDVSSNELDGQLPDKLLAMTTLQELHLENNFISGGINLSSSPGESDLQILDLSHNQFNGYFPEIFGSLTGLKVLNIAGNNFSGSLPTAIGMSSLDSLDISDNHFTGPLPTDLPKGLENFNASYNDLSGIVPENLRKFPSSSFYPGNARLRYPNGPPGSTNMPAEGSKKKPMSTIIKVIIIVSSVVALFIVILLAIFIHYVRISRSPPEYAASKDIHGRAQQNLPGTGRATDRGGALVVSAEDLVTSRKGSSSEIISPDEKLAATAMSPSKNSHFSWSPGSGDSFTAENFARLDVRSPDKLIGELHFLDDAITLTPEELSRAPAEVLGRSSHGTSYKATLENGLLLRVKWLREGVAKQRKEFAKEAKKFSNIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLATFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNVLLDTPDLNARVADYCLHRLMTQAGTTEQILDAGVLGYRAPELAASKKPTPSFKSDVYAFGVILLELLTGRCAGDVISGEDGGVDMTDWVRLRMAEGRGSECFDAALMPEMGNPTAEKGMKDFLGIALRCIRSVSERPGIKTIYEDLSSI 1061
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1344g00005 1061 FunFam LRR receptor-like serine/threonine-protein kinase GHR1 20 265 - -
Pral1344g00005 1061 Gene3D Phosphorylase Kinase; domain 1 772 856 - -
Pral1344g00005 1061 PANTHER OS07G0626500 PROTEIN 6 1061 - -
Pral1344g00005 1061 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 382 612 - -
Pral1344g00005 1061 ProSiteProfiles Leucine-rich repeat profile. 293 315 IPR001611 GO:0005515
Pral1344g00005 1061 SUPERFAMILY RNI-like 292 596 - -
Pral1344g00005 1061 FunFam Pollen receptor-like kinase 1 857 1061 - -
Pral1344g00005 1061 Pfam Leucine rich repeat N-terminal domain 22 67 IPR013210 -
Pral1344g00005 1061 SMART LRR_typ_2 117 141 IPR003591 -
Pral1344g00005 1061 SMART LRR_typ_2 504 526 IPR003591 -
Pral1344g00005 1061 SMART LRR_typ_2 454 478 IPR003591 -
Pral1344g00005 1061 SMART LRR_typ_2 189 212 IPR003591 -
Pral1344g00005 1061 SMART LRR_typ_2 165 188 IPR003591 -
Pral1344g00005 1061 SMART LRR_typ_2 314 338 IPR003591 -
Pral1344g00005 1061 SMART LRR_typ_2 93 116 IPR003591 -
Pral1344g00005 1061 SMART LRR_typ_2 550 578 IPR003591 -
Pral1344g00005 1061 Pfam Leucine Rich Repeat 191 210 IPR001611 GO:0005515
Pral1344g00005 1061 SUPERFAMILY Protein kinase-like (PK-like) 782 1058 IPR011009 -
Pral1344g00005 1061 ProSiteProfiles Protein kinase domain profile. 779 1061 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1344g00005 1061 Gene3D Transferase(Phosphotransferase) domain 1 858 1061 - -
Pral1344g00005 1061 Gene3D Ribonuclease Inhibitor 145 213 IPR032675 -
Pral1344g00005 1061 Gene3D Ribonuclease Inhibitor 23 144 IPR032675 -
Pral1344g00005 1061 Gene3D Ribonuclease Inhibitor 236 617 IPR032675 -
Pral1344g00005 1061 Pfam Leucine rich repeat 506 563 IPR001611 GO:0005515
Pral1344g00005 1061 Pfam Leucine rich repeat 88 129 IPR001611 GO:0005515
Pral1344g00005 1061 Pfam Leucine Rich repeat 362 378 IPR001611 GO:0005515
Pral1344g00005 1061 SUPERFAMILY L domain-like 43 379 - -
Pral1344g00005 1061 Pfam Protein tyrosine and serine/threonine kinase 783 981 IPR001245 GO:0004672|GO:0006468
Pral1344g00005 1061 FunFam Leucine-rich repeat receptor-like protein kinase 764 856 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1344g00005 Pral-Chr1344 25172 30052 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1344g00005 1 1049 Receptor kinase-like Gene Family AT1G55610 27.755 9.94e-79 279
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pral1344g00005 PK_Tyr_Ser-Thr 7.1e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1344g00005 - - gmx:100793639 1688.7