Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1342g00005 ATGGCATTGTGGTGGTCCGTGCTCGTTTTGGCATTCGCTTATGCCATCTGCAGGTTCCTCTTCATGCTCATTCCTCCCAAAGTTCCTTCCATCGACGTCGATACATCTGATGTGTTGGATGATGGAAATCAAGCGCAGGAGAATAGCTTTATATATGTGAGTACCTCCGAGGGACAAGCGCAGCAATCGGGCAAGAAAGTTCAATGCTATGAACCTGCGACAATGAAATACTTGGGATATGTTCCCGCGCTGACACCTACTGAGGTCAAGGAGCAGGTGGCCAAGGTGAGGAAGGCACAGAAAATGTGGGCAAAAACCAGCTTCAAGCAAAGACGTCAGTTTTTGCGCATACTCTTGCAGTATATAATCAGACATCAGGCACTTATATGCGAGATATCTTCACGTGATACTGGAAAGACAATGGTAGACGCTTCTTTAGGAGAAATAATGACAACATGCGAGAAGATCAATTGGCTGCTGTCAGAGGGTGAGAAGTGGCTAAAACCTGAATACCGATCTTCTGGACGTTCAATGCTTCATAAAAGAGCTAGAGTAGAATTTCACCCCCTTGGTGTTATTGGTGCCATTGTTTCCTGGAACTATCCGTTTCACAACATTTTCAATCCTATGCTGGCAGCACTCTTCTCTGGAAATGGCATTGTGATTAAGATATCAGAACATGCAAGTTGGTCTGGATGCTTTTATTTCCGGATCATCCAATCAGCCCTTGCTGCCATAGGTGCTCCAGAGGATCTTGTTGAGGTGATAACAGGGTTTGCAGAGACAGGAGAAGCGTTGGTCTCCTCTGTGGATAAAGTTATATTTGTTGGATCACCTGGTGTTGGTAAGATGATAATGAAAAATGCTGCTGACACGCTTATACCAGTAACTCTTGAGCTTGGCGGAAAAGATGCATTTATTGTGTGTGAAGACGTAGATGTGGACCATGTTGCACAAATTGCTGTCAGAGCTGTTCTGCAGTCAAGTGGACAAAATTGCGCTGGGGCTGAGCGATTTTATGTCCACAGGGATGTCTATGCATCTTTCATCAGTAAAGTGACCAAAATCATAAAGTCCGTTACATCTGGCCCGCCACTTGCTGGAAAGTATGATATGGGAGCTCTCTGCGTGCACGAACATTCTGAAAAGCTCGAAACCCTTGTTAATGATGCTTTAGACAAGGGAGCTGAAATTGTTGCCCGAGGAAGTTTTGGCCATATTGGTGAGGATGCAGTTGATCAGTTTTTCCCTCCGACTGTGATTGTAAATGTGAATCATTCAATGAGATTGATGCAAGAAGAGGCATTTGGACCAATCATGCCAATAATGAAATTTAGCTCTGATGAGGAGGCTATCAAGCTTGCAAATGATTCAAAGTATGGGCTTGGCTGTGCTGTTTTCTCAGGCAATCAAAGCCGGGCTAGAGAGATAGCTTCACAGATACATTGTGGAGTGGCTGCAGTTAATGATTTCGCAGCAACATATATGTGCCAGTCCCTGCCATTTGGAGGTGTGAAACATAGCGGATTTGGAAGATTTGGTGGTGTGGAGGGACTGCGAGCTTGCTGCCTCGTAAAATCAGTTGTAGAGGATCGATGGTGGCCCCTTATCAAGACTAAGATACCCAAGCCTATCCAGTATCCCGTTGCAGGGAATGGATTTGAATTTCAGGAGTCACTTGTTGAAGCACTTTATGGTCTTAGCATGTGGGACCGTTTGCGGGCATTGGTGAACGTTTTAAAAATGCTTACCGAGCAAAACTCTCCCAGCAACAGTAAGAAATTGAAGGATTGA 1794 0.4487 MALWWSVLVLAFAYAICRFLFMLIPPKVPSIDVDTSDVLDDGNQAQENSFIYVSTSEGQAQQSGKKVQCYEPATMKYLGYVPALTPTEVKEQVAKVRKAQKMWAKTSFKQRRQFLRILLQYIIRHQALICEISSRDTGKTMVDASLGEIMTTCEKINWLLSEGEKWLKPEYRSSGRSMLHKRARVEFHPLGVIGAIVSWNYPFHNIFNPMLAALFSGNGIVIKISEHASWSGCFYFRIIQSALAAIGAPEDLVEVITGFAETGEALVSSVDKVIFVGSPGVGKMIMKNAADTLIPVTLELGGKDAFIVCEDVDVDHVAQIAVRAVLQSSGQNCAGAERFYVHRDVYASFISKVTKIIKSVTSGPPLAGKYDMGALCVHEHSEKLETLVNDALDKGAEIVARGSFGHIGEDAVDQFFPPTVIVNVNHSMRLMQEEAFGPIMPIMKFSSDEEAIKLANDSKYGLGCAVFSGNQSRAREIASQIHCGVAAVNDFAATYMCQSLPFGGVKHSGFGRFGGVEGLRACCLVKSVVEDRWWPLIKTKIPKPIQYPVAGNGFEFQESLVEALYGLSMWDRLRALVNVLKMLTEQNSPSNSKKLKD 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1342g00005 597 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 306 501 IPR016163 GO:0016620
Pral1342g00005 597 FunFam aldehyde dehydrogenase 22A1 66 321 - -
Pral1342g00005 597 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 51 528 - -
Pral1342g00005 597 Pfam Aldehyde dehydrogenase family 62 528 IPR015590 GO:0016491
Pral1342g00005 597 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 66 526 IPR016162 GO:0016491
Pral1342g00005 597 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 326 337 IPR016160 GO:0016491
Pral1342g00005 597 FunFam Aldehyde dehydrogenase 22A1 306 501 - -
Pral1342g00005 597 CDD ALDH_F15-22 70 532 - -
Pral1342g00005 597 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 298 305 IPR029510 GO:0016491
Pral1342g00005 597 SUPERFAMILY ALDH-like 59 533 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1342g00005 Pral-Chr1342 33431 39276 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1342g00005 1 588 Aldehyde Dehydrogenase Gene Family AT3G66658 79.592 0.0 1019
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1342g00005 - - gmx:100802990 1094.72