Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1342g00003 ATGTCATCGTCGACGAACCCACCACCGTGTGCGGCTTGCAAGATGCAGAGGAGGAAATGCACGCCGGGATGCGTGTTTGCGCCATATTTTCCGGCGGACAACCCTCGGAAGTTTGCTTGCGTACACAAGATCTTTGGGGCAAGCAATGTGGCCAAGATTCTGAACGACATTAACGTGGTGCAGCGTGAAGACGCCGTCAGATCCTTAGCTTATGAAGCCGAGGCCCGCCTCCGGGACCCCGTGTACGGCTGCTTCGGCATTATCTCCGTCCTCCAGCACCGCCTGAATCAGCTGGAGAGTGAACTCATCGACGCCAGAAAAGAACTCGCCGCCTACATTGATCAGCAGGCCTTGCTTCCGAACCACATAATGGGATTCAATCGGCAAGAACTTTTGACTTTCAACTTCGCTGGAGGCGGCGGCCATGACGGATACCCAGTGGGCCAAACCCACGTCTTTCATCGTCAGGTTGAAGCACATCATCAGTTCGAGGTGCAATCTCAGCAATGGACGTTGTCACAAAAAAATTACCCTAAGATTTGCGTTTCCAGGGTCTCCCCCATGCTTTTCCCTGGCGACGGCGACGGCGTTAACCCAATGTCGGTGCTCGAAGCTTCCACAAAGGCCTGCATCGAGCCGCTGCAAGACGCCGTTTCGAACCTCTCTTCTTTTTGGAAGATGCTTCTCATGCGTTAA 696 0.5402 MSSSTNPPPCAACKMQRRKCTPGCVFAPYFPADNPRKFACVHKIFGASNVAKILNDINVVQREDAVRSLAYEAEARLRDPVYGCFGIISVLQHRLNQLESELIDARKELAAYIDQQALLPNHIMGFNRQELLTFNFAGGGGHDGYPVGQTHVFHRQVEAHHQFEVQSQQWTLSQKNYPKICVSRVSPMLFPGDGDGVNPMSVLEASTKACIEPLQDAVSNLSSFWKMLLMR 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1342g00003 231 ProSiteProfiles LOB domain profile. 8 109 IPR004883 -
Pral1342g00003 231 Pfam Lateral organ boundaries (LOB) domain 9 104 IPR004883 -
Pral1342g00003 231 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 8 155 - -
Pral1342g00003 231 Coils Coil 88 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1342g00003 Pral-Chr1342 23743 26380 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1342g00003 1 120 AS2 family AT5G66870 68.333 1.11e-53 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pral1342g00003 LOB 2.9e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1342g00003 - - gmx:100812543 186.808