Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1342g00001 ATGCGAGTTTCAGAAAAGGCTGTCCAAAGACGAGTTGCACTGGCTCTTGCTCATCTTTGTTCTGTGGATGATCAGAGATTAATATTCATTGATAACAATGGTTTGGAGTTGCTGATTGGGCTTCTTGGCTCTTCTAGCCCAAAGCAGCAACTTGATGGTGCTGTAGCTTTATGCAGGTTGGCCAAGAAAGCCATGACTCTATCTCCCATGGATGATGCTCCCCTCTCTCCAACACCTCAGGTGTATTTGGGAGAGCAGTATGTTAACAATGCTACACTGTCTGATGTTACATTTTTGGTTGAAGGGAAGCGGTTTTATGCTCACAGAATCTGCCTACTTGCATCTTCAGATGCATTTCGTGCAATGTTTGATGGCGGTTATAGGGAGAAGGATGCAAGGGATATAGAAATTCCAAACATAAGATGGGAGGTTTTTGAACTAATGATGAGATTCATCTATACTGGATCAGTTGATGTTACTTTGGACATTGCTCAAGAGCTCCTTCGAGCAGCTGATCAATATCTCCTAGAAGGACTTAAGAGACTGTGTGAGTATGCAATTGCGCAGGATATATCACTTGAGACTGTATCAAGTATGTATGAACTTTCGGAAGCCTTTAATGCAATATCATTGAGGGACACCTGCATCGTTTATATCCTAGAGCAGTATGATAAACTGTGTGCCAGGCCAGGGCACTCTCATCTGATTCAACGCATCATGCCAGAAATACGCAACTACTTTACAAAAGCGCTTACGAAGGCTAGCGCCCCTGTTGCTCGGTCGTAG 786 0.4364 MRVSEKAVQRRVALALAHLCSVDDQRLIFIDNNGLELLIGLLGSSSPKQQLDGAVALCRLAKKAMTLSPMDDAPLSPTPQVYLGEQYVNNATLSDVTFLVEGKRFYAHRICLLASSDAFRAMFDGGYREKDARDIEIPNIRWEVFELMMRFIYTGSVDVTLDIAQELLRAADQYLLEGLKRLCEYAIAQDISLETVSSMYELSEAFNAISLRDTCIVYILEQYDKLCARPGHSHLIQRIMPEIRNYFTKALTKASAPVARS 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1342g00001 261 CDD BTB_POZ_ARIA_plant 81 196 - -
Pral1342g00001 261 SUPERFAMILY POZ domain 86 188 IPR011333 -
Pral1342g00001 261 PANTHER ARM REPEAT PROTEIN INTERACTING WITH ABF2 1 255 IPR044282 -
Pral1342g00001 261 SMART BTB_4 94 191 IPR000210 GO:0005515
Pral1342g00001 261 SUPERFAMILY ARM repeat 5 165 IPR016024 -
Pral1342g00001 261 Pfam BTB/POZ domain 86 189 IPR000210 GO:0005515
Pral1342g00001 261 Gene3D Potassium Channel Kv1.1; Chain A 83 220 IPR011333 -
Pral1342g00001 261 ProSiteProfiles BTB domain profile. 94 161 IPR000210 GO:0005515
Pral1342g00001 261 Gene3D - 1 70 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1342g00001 Pral-Chr1342 349 5210 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Pral1342g00001 BTB 7.9e-27 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1342g00001 - - gmx:100819832 437.958