Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1341g00007 ATGTCGTCGGAAAGTTCTCCCACGTCGGCGGCTGAGCCCCACGCGCCTCTCCTTCGTTCCCGCCAGGGTTCCTCTGATGCCCCCAGGACTCCTACCCTCGCGCTCCTTCTCGGCCGCGCCGTCGGCCGTCGGGGACCCTCCATGCTGGTGCGGGAGACTGCGGCTCGCGAACTGGAGGAGCGGAGGGCTGATTGGGGCTACTCCAGGCCTGTTGTGGTTCTCGACATCACGTGGAATATGGCCTTTGTTGTGGTGTCGGTTGTGATGCTTCTTTTGACGACCAACGAGAAGCCTAACACGCCGATCCGGCTCTGGATCTGTGGGTACGCCGCGCAGTGCCTAGTTCATGTGGTGCTTGTGTGGCTCGAGTATAGGAGGAGGACTGCGAGGATTTCGCGGTTGCGGAGGGCTCAGGAAGGGGATATTGAAGCTCGTAATACCGACGATATTAACGACAGCGAGGACGATGAAACTGGAGATGGGAGTTCATTGAATTCGTCTCGCGCTGGGTTCGTGAAACGATGTGAATCAGTGAATACCATGGTTTCATTCCTTTGGTGGATAGTTGGCTTTTATTGGGTAATCTCAGGTGGCGAGACTCTTCTGCAACATGCTCCACGTTTGTATTGGTTGGCTGTTGTTTTTCTGGCATTTGATGTCTTTTTTGCCATCTTTTGTGTTGTTTTGGCCTGCTTGATTGGCATCGCCCTCTGTTGTTGTTTGCCATGCATCATTGCTATTCTCTATGCAGTTGCTGGACAGGAAGGTGCATCAGAAGCAGATCTTAGCTTACTCCCGAAATATAGGTTTCGCATGTTAAACAATGAGGAAAAGCCTACTGGTGGAGCAGGATCAATGGTTCCTTTAGAAACGACTAGTGGGTACCTGGCAAATGAAAGAGTACTTCTACCTGAAGATGCGGAATGCTGTATATGTCTCACTTCATACGAGGATGGAGTAGAACTCAACGCTCTACCCTGCAACCATCATTTCCATTCCACATGCATTGTGAAATGGTTGAAAATGAATGCAACTTGTCCTCTCTGCAAGTACAATATTCTTAAGGGAAATGACCAGGTGTGA 1083 0.5097 MSSESSPTSAAEPHAPLLRSRQGSSDAPRTPTLALLLGRAVGRRGPSMLVRETAARELEERRADWGYSRPVVVLDITWNMAFVVVSVVMLLLTTNEKPNTPIRLWICGYAAQCLVHVVLVWLEYRRRTARISRLRRAQEGDIEARNTDDINDSEDDETGDGSSLNSSRAGFVKRCESVNTMVSFLWWIVGFYWVISGGETLLQHAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSLLPKYRFRMLNNEEKPTGGAGSMVPLETTSGYLANERVLLPEDAECCICLTSYEDGVELNALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNDQV 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1341g00007 360 MobiDBLite consensus disorder prediction 145 167 - -
Pral1341g00007 360 FunFam E3 ubiquitin protein ligase RIE1 289 357 - -
Pral1341g00007 360 SUPERFAMILY RING/U-box 298 354 - -
Pral1341g00007 360 ProSiteProfiles Zinc finger RING-type profile. 309 350 IPR001841 -
Pral1341g00007 360 SMART ring_2 309 349 IPR001841 -
Pral1341g00007 360 Pfam Ring finger domain 308 350 IPR001841 -
Pral1341g00007 360 PANTHER TARGET OF ERK KINASE MPK-1 40 356 - -
Pral1341g00007 360 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 290 358 IPR013083 -
Pral1341g00007 360 MobiDBLite consensus disorder prediction 1 29 - -
Pral1341g00007 360 CDD RING-H2_PA-TM-RING 308 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1341g00007 Pral-Chr1341 46061 50719 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1341g00007 1 359 C3H Transcription Factor Family AT1G68070 68.524 0.0 508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1341g00007 - K13148 qsa:O6P43_025918 526.554