Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1341g00001 ATGAGCCGAAAACCGCCATTATCATCTTCTATTCGCCCTTGCAAGAAAATTAGAGCTGAAGAAGCTGAAAGGACGTCTAATCAGAAAAAAATGCACTCAGATGGGAATAAGCTATTGTCCATGAAAGCAGAACCGAATCTTATCAAGCTTGAATCAGAAGAAACCGCGGGTAGGAGCAATTTTTCCACTAAAAAAAGTCCAAAATCCTTGGCTATTAAAAAACAAAAGGAGAAACCACTGACTTGGGATGAGAAGGACAGAGCTTTACAGAGAGTCAACACTTTCACCGCCAAAAATCCCTATTTCAAAATTGTCATGCAACCAGCATATGTCAAGAGCTCTTTGAATGTACCGGCAAATTTTGTGAATCAGTATTTGAAGCAGAAGAAAGAAGGAGCAGTTCTTCTGCGGGTTTCAGATGGTAGAACTTGGCGTGTGAAGTGCAATAGGGAAGAAGGAAAGCAGTACAAGTTCCGCCTCAATAGAGGGTGGCCCTGTTTTGCAAAAGACAATAACTTAGAAGTGGGTGATGTGTGTGTTTTTGAACTCACGAACACCATTAACATCTCCTTCCTAGTTCATGTTTTTGGAAATTCTGGGAATCCATATGACTGA 615 0.4081 MSRKPPLSSSIRPCKKIRAEEAERTSNQKKMHSDGNKLLSMKAEPNLIKLESEETAGRSNFSTKKSPKSLAIKKQKEKPLTWDEKDRALQRVNTFTAKNPYFKIVMQPAYVKSSLNVPANFVNQYLKQKKEGAVLLRVSDGRTWRVKCNREEGKQYKFRLNRGWPCFAKDNNLEVGDVCVFELTNTINISFLVHVFGNSGNPYD 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1341g00001 204 MobiDBLite consensus disorder prediction 53 68 - -
Pral1341g00001 204 Pfam B3 DNA binding domain 102 196 IPR003340 GO:0003677
Pral1341g00001 204 SUPERFAMILY DNA-binding pseudobarrel domain 96 199 IPR015300 -
Pral1341g00001 204 ProSiteProfiles B3 DNA-binding domain profile. 100 199 IPR003340 GO:0003677
Pral1341g00001 204 SMART B3_2 102 199 IPR003340 GO:0003677
Pral1341g00001 204 MobiDBLite consensus disorder prediction 14 37 - -
Pral1341g00001 204 MobiDBLite consensus disorder prediction 1 77 - -
Pral1341g00001 204 CDD B3_DNA 100 196 IPR003340 GO:0003677
Pral1341g00001 204 Gene3D - 80 199 IPR015300 -
Pral1341g00001 204 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 16 198 IPR044837 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1341g00001 Pral-Chr1341 619 2035 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1341g00001 76 196 REM Transcription Factor Family AT1G49480 31.707 2.67e-17 75.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Pral1341g00001 B3 2.8e-18 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1341g00001 - - pcin:129311873 311.997