Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1340g00004 ATGAACCTGACGAATCTGGTGCTTGGTCAAAATTCTCTTTCTGGTTCCATTCCAGAAGAGATTGGAATGTTGAGCAATCTTTTGCAACTTGATTTGTCAAATAACTCAATGTTATCTGGTAGAATCCCATCATCAATTGGAAACTTGAACAGGTTACAAGAACTTTATATCGTTTCTTGCAATCTCTCTGGTCCTATACCAAATGAAATTGGAAAACTCGATTCTCTCGCAACAATTAATTTAGAAAGCAATAAACTTTACGGGCCAATCCCTCCCTCTATGGGGAACTTGATAGGTCTCGAGGAGTTGGTCTTGTCAAATAACAAGCTTTTTGGTTCAATTCCTCAATCCATTGGAAACCTGATCAACTTACAAGAAATCTATTTAGAAGATAACAATCTTTCAGGATCGATTCCTTCCACTATAGGAAACATGACAAAGCTCAACACTCTAGTATTGATGGGGAATAATCTTAGTGGTAGCCTTCCATCGGAAATGAATAACATAAGTTGGTATAATCTACAACTGGGTGATAATCATTTCCATGGCCATTTGCCTGAACAGATTTGTCAGGGCGGGACGTTAATTAGGTTTGTTGCTCAACATAACCAGCTCACTGGTCCTATTCCAACTAGTTTGAAGAATTGTTCTAGTCTAAGAAGACTCAGGCTTCAGGGTAACCAACTAGTTGATAATGTAACAAATGCTTTTGGAGTATATCCTGATTTGGACTTCATTGATCTAAGTGGAAATCAATTGTATGGCCACCTTTCATCCAGTTGGGGGAAGTGTCAAAATCTCAGGCAATTATATATTAGTAATAACAAGCTTTCTGGTGATATACCACCACAACTAGGGGAGGCAGCTAAGCTTGGTGAACTTGAGTTGTCTTCAAATTATTTGTCTGGACAAATTCCAAAAGAACTAGGGAAGTTGATAATGTTGGAAAAACTCTCTTTGAACCACAATAACTTCTCTGGTAATGTCCCTTTGGATATAAGATCACTTAATCGGCTTCAAACTTTGGAGTTGGCGGCAAATAAATTTAATAGCTCAATCACTAGAGAGCTTGGGGAACTTAAAAGCTTAAGGATCTTGAACTTGAGCAGAAACAAATTTGACAAAAGCATTCCCCTTGAGTTTGGTGACCTCCGAGGGCTTGAACAGCTCGATCTTAGTGACAATTTGCTAATTGGAAAAATACCGTCTAGACTTGGAATGTTACCCAATTTGAAAGTGTTGAACCTCTCACATAATGATCTCACTGGCACCATTCCTTTTGGTTTTAGTGGATCAATGTCAACTTTGATTAATGTTGACCTATCAAACAATCAATTAGAAGGCCCTGTTCCAAACAAACCAGCCTTTCGAACATTTGAAGGATTGAGGAATAATAAAGGTTTGTGTGGTAATGTCACTGGCTTACATCTTTGTGGTAATTCGCAAATTTGTCGTAAGAGCAAAATCTTTTTGAAGATATTCCTCCCATTGGCCATATTACTACTAGTAGTGGTTGGAGCTTCTTGTATCTTTATCCTACATGAAAGAAAAGCAAAAAACAAAGATGAAGAAGCACAATCTCAAGACATTTATTTTGTATGGAGTTCCAACAGAGAAATATTGTATGAAAATATCATCGAAGCCACAATGAACTTTGATGATAGATATCTCATTGGAAAAGGCGGCCAAGGAAGTGTTTATAAGGCTGAGTTGCCTACAGGTGATATTGTTGCTGTTAAAAGACTTCATTCCTTACCAAGTGGGGAGATCTCCAACAAGAAAGCTTTTACAAGTGAGATTCGAGCTTTGACAGAAATCAAACATCGTAACATTGTGAAGTTGTATGGGTTTTGTTCCAATTCACGATTTTCCTTTCTGGTTTATGAGTTCTTGGAAGGTGGTAGCTTAGACAACATACTAAAGGATGAAGAACAAGCCACTAAACTTGATTGGAAAAAGAGAGTGAATGTTGTTAAAGATGTTGCTAGTGCTTTATTCCACATGCATCATGGCTGTTCATTTCCTATTATTCATCGTGACATATCAAGCAAGAATGTACTTCTAACTTCAGAATATGAAGAAGCTCACCTCATTGACTTTGGAACAGCCAAGTTTCTAAATCCTAACTCAAACAATATGACCACATTTGTTGGCACCTTTGGGTACACTGCACCAGAGATTGCTTATGTTATGGAAGCAAACGAGAAATGTGATGTTTACAGCTTTGGAGTGTTGACTTTGGAGATCATTATGGGAATGCATCCAGGAGAGCTTATTTCATCTTTGATGGAGAAATCAACAACATATGATTTGCTATTAAAGGATGTGCTAGACCCACGACTTTCACCACCTAGAAAATCAATCATTGATGAGCTTATTGCAGTTGCAAAAATAGCATTTTCTTGTTTGAATGAGGATCCTCGTTCTCGTCCAACAATGGAACAAGTATCTACGGAGCTTGAACGGCAACCAAAGTCTCACATGGAAGAACCATTAGTCAGCATCACAATTGGACAACTAATGAACGGCTAA 2532 0.3791 MNLTNLVLGQNSLSGSIPEEIGMLSNLLQLDLSNNSMLSGRIPSSIGNLNRLQELYIVSCNLSGPIPNEIGKLDSLATINLESNKLYGPIPPSMGNLIGLEELVLSNNKLFGSIPQSIGNLINLQEIYLEDNNLSGSIPSTIGNMTKLNTLVLMGNNLSGSLPSEMNNISWYNLQLGDNHFHGHLPEQICQGGTLIRFVAQHNQLTGPIPTSLKNCSSLRRLRLQGNQLVDNVTNAFGVYPDLDFIDLSGNQLYGHLSSSWGKCQNLRQLYISNNKLSGDIPPQLGEAAKLGELELSSNYLSGQIPKELGKLIMLEKLSLNHNNFSGNVPLDIRSLNRLQTLELAANKFNSSITRELGELKSLRILNLSRNKFDKSIPLEFGDLRGLEQLDLSDNLLIGKIPSRLGMLPNLKVLNLSHNDLTGTIPFGFSGSMSTLINVDLSNNQLEGPVPNKPAFRTFEGLRNNKGLCGNVTGLHLCGNSQICRKSKIFLKIFLPLAILLLVVVGASCIFILHERKAKNKDEEAQSQDIYFVWSSNREILYENIIEATMNFDDRYLIGKGGQGSVYKAELPTGDIVAVKRLHSLPSGEISNKKAFTSEIRALTEIKHRNIVKLYGFCSNSRFSFLVYEFLEGGSLDNILKDEEQATKLDWKKRVNVVKDVASALFHMHHGCSFPIIHRDISSKNVLLTSEYEEAHLIDFGTAKFLNPNSNNMTTFVGTFGYTAPEIAYVMEANEKCDVYSFGVLTLEIIMGMHPGELISSLMEKSTTYDLLLKDVLDPRLSPPRKSIIDELIAVAKIAFSCLNEDPRSRPTMEQVSTELERQPKSHMEEPLVSITIGQLMNG 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1340g00004 843 SUPERFAMILY Protein kinase-like (PK-like) 528 820 IPR011009 -
Pral1340g00004 843 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 172 482 - -
Pral1340g00004 843 FunFam MDIS1-interacting receptor like kinase 2 631 826 - -
Pral1340g00004 843 FunFam Leucine-rich repeat receptor protein kinase MSP1 514 630 - -
Pral1340g00004 843 SUPERFAMILY L domain-like 2 166 - -
Pral1340g00004 843 Gene3D Transferase(Phosphotransferase) domain 1 631 834 - -
Pral1340g00004 843 SUPERFAMILY RNI-like 134 502 - -
Pral1340g00004 843 SMART LRR_typ_2 264 288 IPR003591 -
Pral1340g00004 843 SMART LRR_typ_2 121 145 IPR003591 -
Pral1340g00004 843 SMART LRR_typ_2 312 336 IPR003591 -
Pral1340g00004 843 SMART LRR_typ_2 97 120 IPR003591 -
Pral1340g00004 843 SMART LRR_typ_2 360 383 IPR003591 -
Pral1340g00004 843 SMART LRR_typ_2 24 49 IPR003591 -
Pral1340g00004 843 SMART LRR_typ_2 408 431 IPR003591 -
Pral1340g00004 843 SMART LRR_typ_2 384 407 IPR003591 -
Pral1340g00004 843 PANTHER LEUCINE RICH REPEAT KINASE 2 118 824 - -
Pral1340g00004 843 FunFam Leucine-rich repeat receptor protein kinase EMS1 92 171 - -
Pral1340g00004 843 Pfam Leucine rich repeat 99 158 IPR001611 GO:0005515
Pral1340g00004 843 Pfam Leucine rich repeat 338 397 IPR001611 GO:0005515
Pral1340g00004 843 Gene3D Phosphorylase Kinase; domain 1 513 630 - -
Pral1340g00004 843 Pfam Protein kinase domain 556 816 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1340g00004 843 Gene3D Ribonuclease Inhibitor 174 485 IPR032675 -
Pral1340g00004 843 ProSiteProfiles Protein kinase domain profile. 552 833 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1340g00004 843 ProSitePatterns Tyrosine protein kinases specific active-site signature. 676 688 IPR008266 GO:0004672|GO:0006468
Pral1340g00004 843 FunFam Leucine-rich repeat receptor protein kinase EMS1 1 91 - -
Pral1340g00004 843 Gene3D Ribonuclease Inhibitor 1 173 IPR032675 -
Pral1340g00004 843 Pfam Leucine Rich Repeat 410 430 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1340g00004 Pral-Chr1340 53554 56491 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1340g00004 3 725 Receptor kinase-like Gene Family AT4G08850 44.804 0.0 585
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral1340g00004 Pkinase 7.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1340g00004 - - pcin:129318235 1023.85