Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1336g00001 ATGGGGGAGAGTGCCAATCATCACCACGGACCCGCAACGACGTCGTCGAGATTGGCGATGAGGGGTGGAGTGGGAGAGATCGTGGAGGTTCAAGGAGGCCACATTGTTCGCTCCACCGGTCGCAAAGACCGTCACAGTAAGGTTTGTACCGCGAAGGGACCAAGGGATCGGCGAGTTCGTCTCTCCGCTCATACCGCCATTCAATTCTACGACGTCCAAGACCGCCTTGGCTACGACCGCCCCAGTAAAGCCGTCGATTGGCTCATTAAGAATGCCAAGGCCGCCATAGATGACCTTGCTAAGCTTCCGGCATGGAACCCCAATACGGTAAATCAAAATGCCCAGCAAGAGCAGGAGCGAGAGCAGAATCAGATGGTAAGCGAGAATGTGAACGAGAACAAGAGCCCGATTGGAGTTCACCGTGCAGTGGCGGCGGCAGATACCATGGCTTCTGGTAGCCGGGAAACAAGTACGCATGCGGGAAGTGGCTGTCAGATTTTGGAGCAATTGGGTGAAAACCCTAACCGTGGTGGGTCGGCTTTTCTGCCGCCGACGCTGGGCACTGACATTGCTGACTCCATCAAGTCTTTCTTCCCGACTGGTGCGACGGCGGCGCCAGAGACAAATTCTTCGTCCATTCAGTTTCAGAATTACCCACCAGATTTGCTTTCGCGAAGTAGTAGCGCCTGCCAGAACCAAGATCTGCGGCTCTCGCTCCAGTCCTTCCAGGACCCGATTCTGCTTCACCAAGCTCAAAATCAGACTCAGCACCACCATCAACATCAACAGAACGAGCAGTTGTTCTCTGCAACGACCCCACTAGGGTTCGATGGGGCTTCTTTCCCAGACGAACACGGTCGATTGCATAGAATGGTAGCCTGGAATGGTGGTGCTGCTGACGCTGGCAATAGTGGCCACGGCGGAGGAGGAGGTTTCATCTTCAACTCGCCGTCGCCGATGCCGACTCTGCCGCCGCCGCTGTTCGGCCAGAGCCATTATCTTACTCAGAGGGGACCCCTTCAGTCCAGTAACCATCCTTCGATTCGTGCTTGGATAGACTCATCCACCACTGATCACCACCACCACCACTATCTTCCACCGACATTCCATCATCAGTCTGCTATCGCCGGCGGCATCGGATTTGACCCCGGTAGCTTCTCAGGTTTCCGCATCCCAGCACGAATCCAGGGTGAAGAGGAGCATGACGGCGTTTCTGATAAGCCGTCCCCTGCTTCCTCTGATTCTCGCCATTGA 1254 0.555 MGESANHHHGPATTSSRLAMRGGVGEIVEVQGGHIVRSTGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKNAKAAIDDLAKLPAWNPNTVNQNAQQEQEREQNQMVSENVNENKSPIGVHRAVAAADTMASGSRETSTHAGSGCQILEQLGENPNRGGSAFLPPTLGTDIADSIKSFFPTGATAAPETNSSSIQFQNYPPDLLSRSSSACQNQDLRLSLQSFQDPILLHQAQNQTQHHHQHQQNEQLFSATTPLGFDGASFPDEHGRLHRMVAWNGGAADAGNSGHGGGGGFIFNSPSPMPTLPPPLFGQSHYLTQRGPLQSSNHPSIRAWIDSSTTDHHHHHYLPPTFHHQSAIAGGIGFDPGSFSGFRIPARIQGEEEHDGVSDKPSPASSDSRH 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1336g00001 417 MobiDBLite consensus disorder prediction 1 21 - -
Pral1336g00001 417 MobiDBLite consensus disorder prediction 394 417 - -
Pral1336g00001 417 Coils Coil 111 131 - -
Pral1336g00001 417 Pfam TCP family transcription factor 40 141 IPR017887 -
Pral1336g00001 417 ProSiteProfiles TCP domain profile. 41 99 IPR017887 -
Pral1336g00001 417 MobiDBLite consensus disorder prediction 112 134 - -
Pral1336g00001 417 MobiDBLite consensus disorder prediction 309 347 - -
Pral1336g00001 417 MobiDBLite consensus disorder prediction 112 137 - -
Pral1336g00001 417 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 34 341 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1336g00001 Pral-Chr1336 23888 26667 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1336g00001 8 417 TCP Transcription Factor Family AT3G15030 48.741 1.74e-102 309
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Pral1336g00001 TCP 1.5e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1336g00001 - - qsa:O6P43_001018 456.447