Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1335g00001 ATGACTTTAGAAAAATCAGCTCGTCTGCAGGGATCATCCATCGACTTGGTAACTCCGTTCACTGACGGTGTCGGGCGAGCAACATATCACCTACCGATGCACTTGTGGGACAAAGCCACCGGGAAACTCACAGATTTCTCCACCAACTTCACCTTTGTGATTTTTTCAAATAACAGCCTCAACGAGTCTGGCGATGGGATGGCCTTCTTCTTAGCCCCTAAGGATTCAAAGCTCCCTAATATTCCAGAAAGGGGAGGAGGTGGTTTGGGTCTGATAAGTCTGATTAATGCAACAGATCTTCCATTGATGGGTCTGAATAATTCAACAGATCATCCATTTGTTGCTGTGGAGTTTGATATCTTTCGCAATTACTGGGATCCTCCGTATATACATGTGGGTGTCGATATCAATTCTACTAATTCCGTTAGTTCTGTTCAATGGGACGCTGATATCAAAGGAGGCAGAACAAATGAGGCTTTCATCAGCTACAATGCAAGTACGCATAATTTAAGCATCTCCTTCACTGATGGTTTTGATCTTTCTAACAACACTGTGTGGCGACATCTTCATCACATAGTTGATCTACGAGAGTACCTGCCTGAATTGGTTACTTTCGGTTTCTCAGCCGCCACCGGACGATACTATGCAGTACACACGATCGATAGATGGAGTTTCCACTCAGAGGACCTCCCAACTGTTGCTCCTAGTCCAAGTCCAGTACCAAGTCTAAGCCCGAGCCCGAGCCCAAGCCGAACGAGTAGAAATTACACAGCACTTGCAACAGGATTAGGGGTTGGAGGATTACTGTTAGTTGTTGGGGCGGCATGGTTTGTGTTGTGGAAGAACAAAAAGAAAATGGAAGATGATGATTCTAATGAGAACATAAGTGAAGATGATTTTGAAAGAGGAACAGGTCCCAAAAAGTATTCATATGCTGAACTAGCAAGTGCTGCAAATTATTTTAAAGATGAGCACAAGCTTGGACAGGGAGGATTTGGAGGTGTCTACAGAGGTTTTCTCAAATATTCAAACTCCTATGTTGCCATAAAGAGAATATCAGAGGGCTCTAAACAAGGGAAGAGGGAGTTTGCTTCGGAAGTAAGAATTATTAGTCAACTAAGACATCGAAATTTGGTGCATCTAATCGGTTGGTGTAATGAAAGGAGAGAACTATTGCTAGTTTATGAGTACATGCCAAATGGAAGTTTAGATTCTCATCTTTTCAAGGACGAAAGGTTGCTGACATGGTCAATTAGATTTAAAATTACTCAAGGCTTGGCCTCTGCATTATTGTACCTGCACGAAGAATGGGAACAGTGTGTGGTCCATAGAGACATAAAATCAAGCAACATCATGCTAGACTCAAACTTCAATGCAAAACTTGGAGATTTTGGATTGGCACGGCTTGTAGACCACACAAAAGGAGCACAAACTACAGCTGTAGCAGGAACCATGGGCTATATGGCTCCTGAGTGTGTTATCATTGGAAGGGCTAGCAAAGAATCTGATGTCTATAGCTTTGGAATTGTTGCTCTAGAGATAGTTTGTGGGAGAAAACCCATCAACCCAAAGGCTCCAGATGATGAAATAAACATAGTGCAATCGGTATGGGATCTCTATGGAAGTGGTAGAATCCTGGAAGCAGTTGATCCAAGGCTGCAAGGAGATTTTGACCATGATCAAGTCGAATGCCTCATGCTTGTTGGGTTATGGTGTGCTCATCCTGATCAAAATCGCAGGCCTTCAATAAGGCAAGCAATTCATGTGTTAAACTTTGAAGCTAAAATTCCTAGTCTTCCTTCAAGTTATCCTATACCAACGTATGATGAATTTCCGGTGCCCTTATCATTTTCAATTCTATCCAATGCCAATGCTTCAGAGGTAAGTCCAAACCAGAAAATTAGCTTTAGTTCCAACACAAACTCTTCTGGTTACGCTACAACTTTCTGA 1950 0.4246 MTLEKSARLQGSSIDLVTPFTDGVGRATYHLPMHLWDKATGKLTDFSTNFTFVIFSNNSLNESGDGMAFFLAPKDSKLPNIPERGGGGLGLISLINATDLPLMGLNNSTDHPFVAVEFDIFRNYWDPPYIHVGVDINSTNSVSSVQWDADIKGGRTNEAFISYNASTHNLSISFTDGFDLSNNTVWRHLHHIVDLREYLPELVTFGFSAATGRYYAVHTIDRWSFHSEDLPTVAPSPSPVPSLSPSPSPSRTSRNYTALATGLGVGGLLLVVGAAWFVLWKNKKKMEDDDSNENISEDDFERGTGPKKYSYAELASAANYFKDEHKLGQGGFGGVYRGFLKYSNSYVAIKRISEGSKQGKREFASEVRIISQLRHRNLVHLIGWCNERRELLLVYEYMPNGSLDSHLFKDERLLTWSIRFKITQGLASALLYLHEEWEQCVVHRDIKSSNIMLDSNFNAKLGDFGLARLVDHTKGAQTTAVAGTMGYMAPECVIIGRASKESDVYSFGIVALEIVCGRKPINPKAPDDEINIVQSVWDLYGSGRILEAVDPRLQGDFDHDQVECLMLVGLWCAHPDQNRRPSIRQAIHVLNFEAKIPSLPSSYPIPTYDEFPVPLSFSILSNANASEVSPNQKISFSSNTNSSGYATTF 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1335g00001 649 SUPERFAMILY Protein kinase-like (PK-like) 305 609 IPR011009 -
Pral1335g00001 649 ProSiteProfiles Protein kinase domain profile. 321 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1335g00001 649 SUPERFAMILY Concanavalin A-like lectins/glucanases 3 228 IPR013320 -
Pral1335g00001 649 FunFam Lectin-domain containing receptor kinase A4.3 398 610 - -
Pral1335g00001 649 Pfam Protein kinase domain 321 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1335g00001 649 Pfam Legume lectin domain 2 231 IPR001220 GO:0030246
Pral1335g00001 649 CDD STKc_IRAK 327 591 - -
Pral1335g00001 649 CDD lectin_legume_LecRK_Arcelin_ConA 1 227 IPR001220 GO:0030246
Pral1335g00001 649 ProSitePatterns Serine/Threonine protein kinases active-site signature. 441 453 IPR008271 GO:0004672|GO:0006468
Pral1335g00001 649 SMART serkin_6 321 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1335g00001 649 Gene3D - 1 232 - -
Pral1335g00001 649 Gene3D Transferase(Phosphotransferase) domain 1 398 611 - -
Pral1335g00001 649 ProSitePatterns Protein kinases ATP-binding region signature. 327 350 IPR017441 GO:0005524
Pral1335g00001 649 FunFam L-type lectin-domain containing receptor kinase IX.1 306 397 - -
Pral1335g00001 649 PANTHER - 22 600 - -
Pral1335g00001 649 Gene3D Phosphorylase Kinase; domain 1 306 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1335g00001 Pral-Chr1335 5441 7390 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1335g00001 1 608 Receptor kinase-like Gene Family AT5G10530 48.148 0.0 548
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pral1335g00001 Pkinase 5.4e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1335g00001 - - pcin:129286332 889.412