Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1331g00012 ATGGCGATTCAAGGGGCAGCATCATCATCCCTTAGCTTTACCAAGTACAGATATGATGTTTTCTTGAGTTTCAGAGGCGAAGACACTCGCAAATCCTTCACTGTCATTCTCTACGAAGCTTTGCGCAAGAAGGGAATCAACGCCTTCATCGATGACAGGAAGCTCGGTAAAGGGGAACGAATCGCACCTTCGCTTCTTAAAGCCGTAGACAAATCCAGGATTTCTATTATTGTGTTCTCTGCAAACTACGCTACTTCCACATGGTGCCTTGATGAACTGGCTCACATCATTCGGTGTAAGAAGAAGAAGAACCAGGTGGTTATGCCAATATTTTACAAGGTGGATCCAATGGATGTCCAATATCAGAGAAATAGCTTTGAGGAAGCCATGGCTGCTCATGAAGCTGGGTTCATAAATGACCTGCAGAAAGTGCGAAAATGGAGGTCTGCGTTATTTGAAGCTGCTAGCTTGTCACCAGCATGGCTTTTCGAAGATGGGTATGAATTTGGGTTTATTGAAAGGATTGTTGGAGATGTGTATGCTAGGCTTCCTCCTAAACCACACCATAATGTAGAACACATGGTTGGACTTGAGCCTCGGATAGATGAAGTGATCTCACTTTTAAATAAATCTGACAATGGTGTCTGCATGTTGGGAATTCATGGAACTGGTGGAATTGGCAAAACAACCCTTGCAAAAGCTGTCTACAATTCAATATTCTACCAATTTGAAGGTGCATGTTTCTTGTTTGATGTCAATGAGGCATCAAAAAAATTCCAGGGCATTGTTAATCTTCAACAAAAGCTTATGTCTGATATTCTTGAGGAAAAGATCCTGAGATTTTGTAGTGCTGATGAAGGAATATCTAAAATAAAACACAGACTCTCTCATAAAAGAGTTTTGTTGGTTCTTGATAATGTGGATGAGATTGAACAGTTAGAACGACTTGCAGGGGGGTGTGATTGGTTTGGTTGTGGAAGCAAGGTCATTATAACAACAAGAAATAAGCAATTGCTCATTGCTCATAATGTTAAAAGAACATATGAATTGATGCAGCTAAATGATCATGACTCTCTTGAACTCTTTTGTTGGCATGCCTTTCACATGAGCCTACCTCCAAAAGGCTACCAACAGATGTCTAGTTATGTGATAAGTTATGCAAAGGGCCTTCCTCTGGCTTTAAAATTAATTGGTGCCAATTTAGCAGATAAAAACTTAGAGGAATGGCGGTCTACATTGGAACAATATGATCGTATCCCAGAAAGAACAATACATGAAGTACTAAAGATAAGCTATGACTGCTTACAAGATGGAGCTAAGACTGTATTCTTGGATATTGCTTGTTTCATTAGAGAGGAGATATTAGGTTCTCTTGATGAAATAGTAGACTCTTCTGATTATGGTGGAACTAGTAATATCGAAGGAATAATGTTTGATCCGCCTCAACAACAAGAAGTGGAGTGGAGTGGTATAGCATTTGAGAAAATGAATAATCTTAGAATCCTTATTGTCCGAAAGGCCCAATTTTCAACTGGTCCTAAATATCTTCCCAATAGTTTGAGATGGCTTGAATGGGAGGGATATCCTTCTACAAAATTGCCGCCAATTTTTTCCCCAAGCAAACTAGCTGTCTTCAAGTTATTCTGCTCTCCTTTCAAGTTGGAAGAGCCATTCATGAGATTTGAATATTTGACATGCATGAATTGCTCAAATTGTGAATTCATAACTGAAGTACCCGATATGTCTCAATGTCAAAGTTTAAGGAGATTGCTGTTTGAAGATTGTTACAATTTGATCAAAATTCATGATTCAGTGGGATCTCTCTCGAAGCTGGTTGAATTAAATGTTAGTGGATGCGTTAAACTTGCAAGCTTTCCCCATGAAATCAAGATGCCATCTCTTCAAGCGATTGATTTGAGTTTTTGCGAGAGTCTTGACTACTTCCCACATACAGTTGGAAACATGGATGCATTAACGTATGTTTGGATTGAAGAAACATCTATTAAGGAGCTCCCACCTTCCATTGGAAATCTTGCCCGGCTTGAATCTTTGAACTTAAGCTCTTGCAAAAGTCTTAGGGAGCTTCCAAACAGCTTATTCACGTTTCAAAATCTTGACTGGCTTGGTTTGGAAGGCATTCATCCTGATGGGAGAAAGTCTTTAAGGAAATTATTGCAAGAGAGCCAACCAGTTAGTAGCTGCACAAACGTACAGTTCTTGATGCTCCAAAATTGTTGTCTCTTGGATGAAGATGTTCAACTAACTCTGGATCTTTTCCGAAATTTGATAGAGTTAAATCTATCAGGGAATGATTTTGTGTCTCTTCCTGAGTGCCTTAAAGAGTGTGGTAAGTTGTTGAAATTGAATGTGAATAACTGCAAGTGGCTAAGAGATATACCAGGGTTACCATCAAATTTGCAGATAATGGGGGCAGAGAATTGCATTTCATTAACTCCAAAGTCATTGGGCCATTTATGGTCTCAGGCCAAAAGGGAGTTCTATGGCATGAGGACCATTTTCCCAGCAAAGTCATCTCCTGATTGGTTCCACAGTTGGTGTGGAGGAGGGAAAATGTCTTTTCTTGCTCGTAGGAATTTCCCTCATGTGGCATTTGCATTTGAGTTGGGGAAAGCCAACACGAGTAGGAGACAATCATTACGTTTTTCTCTGAGCATCAATGGTCGCATATTACAAGAGAGAAATGATCGTATCACAATTGCACCAGATCACGTGGCTTTATTTAATCTGGGAGTGGCTTTTGAGGGAGAAGACTGGAGGTGGCTTCAAAGATTCATGGAATTGGATTGGAATGATGTGGAGATACAAGCCATTTGTTTAACGCCAGAGATACCTGTGGTTAAGTGTGGAGTTTATGTGTACCAACGGCTAACAAACATGGAGAATATCCAATTCAAGCCTCCTTTGGTTTCCATAAATACTCCAGCAACTTCATTGAAACGAAAAGCCATAGCTTCTCCTCCAAATGCACCATCCAAGAAGGCCCTCAGAAAGCTCAAGACTACTGATAAAGGAAAGATCAACAACATAAAGAAAGGTTCAAGGAGAAATCAACGACACCAATTGTTTCATTCCCGCCGCAAGAAAAGGATGGTTTTTCCAATGGGTAAGCATGTTTGGAGATTTTTGAACTGTTAG 3156 0.4002 MAIQGAASSSLSFTKYRYDVFLSFRGEDTRKSFTVILYEALRKKGINAFIDDRKLGKGERIAPSLLKAVDKSRISIIVFSANYATSTWCLDELAHIIRCKKKKNQVVMPIFYKVDPMDVQYQRNSFEEAMAAHEAGFINDLQKVRKWRSALFEAASLSPAWLFEDGYEFGFIERIVGDVYARLPPKPHHNVEHMVGLEPRIDEVISLLNKSDNGVCMLGIHGTGGIGKTTLAKAVYNSIFYQFEGACFLFDVNEASKKFQGIVNLQQKLMSDILEEKILRFCSADEGISKIKHRLSHKRVLLVLDNVDEIEQLERLAGGCDWFGCGSKVIITTRNKQLLIAHNVKRTYELMQLNDHDSLELFCWHAFHMSLPPKGYQQMSSYVISYAKGLPLALKLIGANLADKNLEEWRSTLEQYDRIPERTIHEVLKISYDCLQDGAKTVFLDIACFIREEILGSLDEIVDSSDYGGTSNIEGIMFDPPQQQEVEWSGIAFEKMNNLRILIVRKAQFSTGPKYLPNSLRWLEWEGYPSTKLPPIFSPSKLAVFKLFCSPFKLEEPFMRFEYLTCMNCSNCEFITEVPDMSQCQSLRRLLFEDCYNLIKIHDSVGSLSKLVELNVSGCVKLASFPHEIKMPSLQAIDLSFCESLDYFPHTVGNMDALTYVWIEETSIKELPPSIGNLARLESLNLSSCKSLRELPNSLFTFQNLDWLGLEGIHPDGRKSLRKLLQESQPVSSCTNVQFLMLQNCCLLDEDVQLTLDLFRNLIELNLSGNDFVSLPECLKECGKLLKLNVNNCKWLRDIPGLPSNLQIMGAENCISLTPKSLGHLWSQAKREFYGMRTIFPAKSSPDWFHSWCGGGKMSFLARRNFPHVAFAFELGKANTSRRQSLRFSLSINGRILQERNDRITIAPDHVALFNLGVAFEGEDWRWLQRFMELDWNDVEIQAICLTPEIPVVKCGVYVYQRLTNMENIQFKPPLVSINTPATSLKRKAIASPPNAPSKKALRKLKTTDKGKINNIKKGSRRNQRHQLFHSRRKKRMVFPMGKHVWRFLNC 1051
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1331g00012 1051 Gene3D - 184 348 IPR027417 -
Pral1331g00012 1051 Gene3D - 352 436 IPR042197 -
Pral1331g00012 1051 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 157 IPR035897 -
Pral1331g00012 1051 PRINTS Disease resistance protein signature 294 308 - -
Pral1331g00012 1051 PRINTS Disease resistance protein signature 676 692 - -
Pral1331g00012 1051 PRINTS Disease resistance protein signature 217 232 - -
Pral1331g00012 1051 PRINTS Disease resistance protein signature 387 401 - -
Pral1331g00012 1051 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 446 IPR027417 -
Pral1331g00012 1051 ProSiteProfiles TIR domain profile. 16 183 IPR000157 GO:0007165
Pral1331g00012 1051 Pfam NB-ARC domain 200 418 IPR002182 GO:0043531
Pral1331g00012 1051 Gene3D Ribonuclease Inhibitor 653 827 IPR032675 -
Pral1331g00012 1051 SUPERFAMILY L domain-like 477 823 - -
Pral1331g00012 1051 Gene3D Ribonuclease Inhibitor 488 652 IPR032675 -
Pral1331g00012 1051 Gene3D - 12 183 IPR035897 -
Pral1331g00012 1051 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 18 738 IPR044974 GO:0006952
Pral1331g00012 1051 FunFam Disease resistance protein (TIR-NBS-LRR class) 14 184 - -
Pral1331g00012 1051 Pfam TIR domain 18 179 IPR000157 GO:0007165
Pral1331g00012 1051 SMART till_3 17 157 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1331g00012 Pral-Chr1331 109421 114969 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1331g00012 469 712 WRKY Transcription Factor Family AT4G12020 35.249 2.80e-28 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1331g00012 - - pcin:129284776 1164.83