Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1331g00007 ATGGCAACTCAAATCGTAGCACCGTCATTGTTTGGCTTCTCCCGTGAAAGCAAGTATAGATATGATGTTTTCCTGAGTTTCAGAGGTGAAGATACTCGCCGCTCCTTCACCGTCTTCCTCTATGAAGCTTTGCGTCGGAAAGGAATCAACGCCTTCATCGACGACAAGAAGCTTGGGAAAGGGGAAGAGATCTCACCTACGCTTCTTAAAGCCATTGAGAGATCCAGGATTTCCATTATTGTGTTCTCTAGGAACTATGCTACTTCCACATGGTGTCTAGAGGAACTCGCACACATCATTTGGTGTAAGAAGCAGAAGAACCAGTTGGTTATGCCCGTCTTTTACAAGGTAGATCCGTTGGATGTTCAATATCAGAGAAACAGCTTCGGAGATGCCATGGCTACTCTTGAAGATAGATTCAGAGATGACTTGGAGAAAGTGCGAAAATGGAGATCTGCTTTGTCCGAAGCTGCTAGTTTGTCATCAGCATGGCTTTTCGATGATGGAGACGAAGACAAGTTTATTGAAAGGATTGTCGAAGATGCATTTGCTAAGCTGCCTCCTAAACGCTTTCATAACACTGATCATATGGTTGGACTTGAGCCCCGCATAAAAGAGGTGATGTCAATTCTAAATAAATCTGATGATCGTGTTTGTATGTTGGGGGTCCATGGAATTGGTGGAATTGGCAAAACAACTCTTGCAAAAGCTATTTATAATTCAATCTTCTACGAATTTGAAGGTCATTGTTTTTTGTTTGATGTAAAAGAAGCATCAAAGAAATACAAGGGCATTGTCCGCCTTCAACAGACACTTCTATCAGAAATTCTAGAAGAGAAGAGGATGAAATTTGGCAGTGTTGATGAAGGAATATCAAAAATAAAACATAGACTCTCTCACAAAAAGGTTTTGTTGGTTCTTGATGATGTTGATGAGGTTGAACAGTTAGAACAACTAGCAGGGGGATGTGATTGGTTTGGTTGTGGAAGCAAGATCATTATTACTACAAGAAACAAACAATTGCTAATTGCATGTAATGTTAAAAAGACATATGAAATGAAGAAGCTACATGAGCATTACTCTCTGGAGCTCTTTTGTTGGTACGCCTTTCATATGAGCCAACCTCCAAAAGGCTATAAAAATATGTCCATTCACGTTACAAGGTATGTACGTGGCCTTCCTTTGGCTTTGAAAGTAATAGGCTCCAATTTGGCACATAAAAGCATTGAGGAATGGAGATCTATATTGAAGCAATATGATGAGATTCCAGAAAGAACAATTCATCATGTCCTGAAGATAAGTTATGATTGTTTACAAGAGTGTGCTAAGGGTATTTTCTTAGATATTGCTTGCTTCTTCAAAGAGGAGAAATTGGAATTTGTTGAAGCAATATTAGAAGCTTGTGATCGTGGGGCAAGGTTTTATATTGAAGTTCTCGTTGATAAATCTTTGATAACTATTAATGATAAAGGTTATTTGTACATGCATGATTTAATACAACAAATGGGTAGAGAGATTGTTAGGCAAGAAGCACTATCGGATCCTGGCAAACGCAGCAGATTATGGTATTACAAAGATGTTCTCAAAGTACTACATGAAAATTTAGGAGGCAACAATATTGAAGGAATAATACTTGATCCACCTCACCAGGAAGAAGTGAAATGTAGTGATTCAGCCTTTGAGAAGATGAATAATCTTAGAATCATCATTGTTCGCAATACTCAATTTTTGACATGTCCTAAATATCTTCCGAATAGTTTAATATTACTAGATTGGCAGGGATATCCTTCTATGAATTTGCCACCAGATTTTTCGCCTCCAAAACTAGTTTGCCTCAAGATATACGGCAGTCCTTTCAGCTTGGAGGTATCGTTCGAGAGATTTGAATATTTGACGTATTTGGACTTCTCAAAGTGTGAATTCATAAGTGAAGTCCCTGACATGTCTCAGTTTCAAAATTTAAAAACATTGAGCTTTCGTGAATGTCGCAGTCTGATCAAAGTTCATGATTCTGTGGGATCTCTCTTCAAGCTAGTGAAATTAGACGTTCTTGAATGCATCAAACTCACAAGCTTTCCACATGAAATCAAGATGCCATCTCTTCAAGAGTTTAATATTAGTGATTGCAAGAGTCTTGAAATACTTCCCAGAAATCGTGGGAAACATGGATCCACTGATGAGTGTGCTTATTTGGAGAGACTAGATCTGAGTGCCTGCAAGAGGCTAAGAGACATACCAGAGTTACCATTAACTCTGCAGAGCATAGCTGCAGATAAGTGCATGTCATTAACTTTGGAGTCGATACGTCATTTATGGTCTCAGGCAAAAGAGGGCTTTCGCGTGGAAATCGTTATGCCAGCAATATCATTTCCTGATTGGTTACACTTTTGTTGTAAAGGTGGCAAATTGTCTTTTCGTGTCCGTGGAAATTTCCCACAAATCCTCATCGCATACGAAACAGGGAAGGCAAACACAAGTGGGATATACACATTAGAAGTTTTTATGAGGATCAATGGTAGTAAAAAAATGCCATGGGTACAAAGTGATCGTGATGCAAGAGAAAAGGGTCGTTTTGTGCTTTCTGTAGGATATCAAGCTCATGTATTCTTCTATGATCTACTAAGTGATTTTAGTGAAGAAGAGTTGGAGGAGCTTAATAAGTTTTTGGATTTGGAATGGAATGATGTGGACATACAAGTTACGTCTGACTCACCAGCTGATATGTCCATAATTAACTGTGGTATTTATGTCAATAAGCAACAGACAAGTATGGAAAATGTTCAGTTCAAGTCTCCTTTGCGTTCCATGAATGCTTCAAGAGCTTCGCTGAAACGAAGAGCAGTAGCTTCTCATCCCAACGAACCACCCAAGAAGCATTTGAGAAGGTTCAAAGAGAAGATCAATTGCACAAGAAGGACAAGATTCGCCATTGCGATTATCTCAGCCATGGCGATTCAACCGGCAGCATCATCATCCCATACCTTTACCAAGTACAGATACGACGTTTTCTTGAGTTTCAGAGGCGAAGACACTCGCCACTCTTTCACTGTCATTCTCTACGATGCCTTGCGTAGGAAGGGAATCAACGCCTTCATTGATGACAGAAAGCTTGGGAAAGGGGAAGAGATCTCGCCTACGCTTCTTAAAGCCATTGAGAGATCAAGGATTTCCATTATTGTGCTCTCTAGAAACTATGCTACTTCCACTTGGTGCCTGGAGGAACTCGCCCACATCATTTGGTGTAAGAAGCAGAAGAATCAGGTGGTCATGCCCATCTTTTACAAGGTCGATCCGTTGGATGTTCAGTATCAGAGAAATAACTTTGAGGAAGCCATGGCTACCCTTGAAGATAGGTTCAGAGATGATTTAGAGAAAGTGTGGAAATGGAGGTCTGCCTTGTTTGAAGCTGCTAGTTTGTCATCAGCATGGCTTTTCCAAGATGGATACGAAATTGGGTTTATTGAAAGGATTGTTGAATATGTGTATGCTATGCTTCCTCCTAAACCATACCATAACATAGAACACATGGTTGGACTTCAGCCTCGGGTAGAAAAAGTGATCTCGCTTCTAAATAAATCTGACAAAGGTGATTGCATGTTGGGCATTCATGGAATTGGCGGAATTGGCAAAACAACCCTTGCAAAAGCTATCTATAATTCGATCTTCTACCAATTTGAAGGTGCGTGTTTCTTGTTTGATGTCAATGAGGCATCAAAAAAATTCCAGGGCATTGTTCATCTTCAACAAAAACTTCTATCTGATATTCTAGAGGAAAAGATTACGAGGTTTGGTAGCGCTGACCAAGGAATATCTAAAATAAAACACAGACTCTCCCGTAAAAGAGTTTTGTTGGTTCTTGATGATGTGGATGAGATTGAACAGTTAGAACGACTTGCAGGGGGGTGTGATTGGTTTGGTTGTGGAAGCAAGGTCATTATAACAACAAGACATAAGCAATTGCTCATTGCTCATAATGTTAAAAGAATATATGAATTGACGGAGCTAGATGATCATGATTCTCTTGAACTCTTTTGTTGGCATGCCTTTCGTATGAGCCTACCCCCTAAAGGCTATGAACAGATGTCTAGTCATGTGATAAGTTATGCAAAGGGCATTCCTCTTGCTTTAAAATTAGTTGGCGCCAATTTAGCAAATAAAAACTTAGAGGAATGGAGGTCTACATTGGAACAATATGATCGGGTTCCAGAAAGAACATTACATGAAGTACTAAAGATAAGTTATGACTGCTTACAAGATGGTGCTAAGATTATTTTCTTGGACATTGCTTGTTTCTTTGAAGAGGAGATATTGGGTTCTATTGATGAGATAGTAGAAGCTTGCGATTATGGTGCAAGGTTTTATATTGAAGTGCTTATTGATAGATCTCTTTAG 4392 0.3939 MATQIVAPSLFGFSRESKYRYDVFLSFRGEDTRRSFTVFLYEALRRKGINAFIDDKKLGKGEEISPTLLKAIERSRISIIVFSRNYATSTWCLEELAHIIWCKKQKNQLVMPVFYKVDPLDVQYQRNSFGDAMATLEDRFRDDLEKVRKWRSALSEAASLSSAWLFDDGDEDKFIERIVEDAFAKLPPKRFHNTDHMVGLEPRIKEVMSILNKSDDRVCMLGVHGIGGIGKTTLAKAIYNSIFYEFEGHCFLFDVKEASKKYKGIVRLQQTLLSEILEEKRMKFGSVDEGISKIKHRLSHKKVLLVLDDVDEVEQLEQLAGGCDWFGCGSKIIITTRNKQLLIACNVKKTYEMKKLHEHYSLELFCWYAFHMSQPPKGYKNMSIHVTRYVRGLPLALKVIGSNLAHKSIEEWRSILKQYDEIPERTIHHVLKISYDCLQECAKGIFLDIACFFKEEKLEFVEAILEACDRGARFYIEVLVDKSLITINDKGYLYMHDLIQQMGREIVRQEALSDPGKRSRLWYYKDVLKVLHENLGGNNIEGIILDPPHQEEVKCSDSAFEKMNNLRIIIVRNTQFLTCPKYLPNSLILLDWQGYPSMNLPPDFSPPKLVCLKIYGSPFSLEVSFERFEYLTYLDFSKCEFISEVPDMSQFQNLKTLSFRECRSLIKVHDSVGSLFKLVKLDVLECIKLTSFPHEIKMPSLQEFNISDCKSLEILPRNRGKHGSTDECAYLERLDLSACKRLRDIPELPLTLQSIAADKCMSLTLESIRHLWSQAKEGFRVEIVMPAISFPDWLHFCCKGGKLSFRVRGNFPQILIAYETGKANTSGIYTLEVFMRINGSKKMPWVQSDRDAREKGRFVLSVGYQAHVFFYDLLSDFSEEELEELNKFLDLEWNDVDIQVTSDSPADMSIINCGIYVNKQQTSMENVQFKSPLRSMNASRASLKRRAVASHPNEPPKKHLRRFKEKINCTRRTRFAIAIISAMAIQPAASSSHTFTKYRYDVFLSFRGEDTRHSFTVILYDALRRKGINAFIDDRKLGKGEEISPTLLKAIERSRISIIVLSRNYATSTWCLEELAHIIWCKKQKNQVVMPIFYKVDPLDVQYQRNNFEEAMATLEDRFRDDLEKVWKWRSALFEAASLSSAWLFQDGYEIGFIERIVEYVYAMLPPKPYHNIEHMVGLQPRVEKVISLLNKSDKGDCMLGIHGIGGIGKTTLAKAIYNSIFYQFEGACFLFDVNEASKKFQGIVHLQQKLLSDILEEKITRFGSADQGISKIKHRLSRKRVLLVLDDVDEIEQLERLAGGCDWFGCGSKVIITTRHKQLLIAHNVKRIYELTELDDHDSLELFCWHAFRMSLPPKGYEQMSSHVISYAKGIPLALKLVGANLANKNLEEWRSTLEQYDRVPERTLHEVLKISYDCLQDGAKIIFLDIACFFEEEILGSIDEIVEACDYGARFYIEVLIDRSL 1463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1331g00007 1463 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 21 749 IPR044974 GO:0006952
Pral1331g00007 1463 SUPERFAMILY Toll/Interleukin receptor TIR domain 16 160 IPR035897 -
Pral1331g00007 1463 Pfam TIR domain 21 189 IPR000157 GO:0007165
Pral1331g00007 1463 Pfam TIR domain 1000 1145 IPR000157 GO:0007165
Pral1331g00007 1463 Gene3D - 188 351 IPR027417 -
Pral1331g00007 1463 Gene3D - 1167 1329 IPR027417 -
Pral1331g00007 1463 ProSiteProfiles TIR domain profile. 998 1165 IPR000157 GO:0007165
Pral1331g00007 1463 ProSiteProfiles TIR domain profile. 19 186 IPR000157 GO:0007165
Pral1331g00007 1463 Pfam NB-ARC domain 203 433 IPR002182 GO:0043531
Pral1331g00007 1463 Pfam NB-ARC domain 1182 1400 IPR002182 GO:0043531
Pral1331g00007 1463 Coils Coil 1381 1401 - -
Pral1331g00007 1463 SUPERFAMILY Toll/Interleukin receptor TIR domain 990 1139 IPR035897 -
Pral1331g00007 1463 Gene3D Ribonuclease Inhibitor 528 774 IPR032675 -
Pral1331g00007 1463 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 189 449 IPR027417 -
Pral1331g00007 1463 FunFam Disease resistance protein (TIR-NBS-LRR class) 17 187 - -
Pral1331g00007 1463 SUPERFAMILY "Winged helix" DNA-binding domain 426 531 IPR036390 -
Pral1331g00007 1463 SMART till_3 999 1139 IPR000157 GO:0007165
Pral1331g00007 1463 SMART till_3 20 160 IPR000157 GO:0007165
Pral1331g00007 1463 FunFam Disease resistance protein (TIR-NBS-LRR class) 996 1166 - -
Pral1331g00007 1463 Gene3D - 355 439 IPR042197 -
Pral1331g00007 1463 Gene3D - 1334 1418 IPR042197 -
Pral1331g00007 1463 Gene3D - 15 187 IPR035897 -
Pral1331g00007 1463 Gene3D - 994 1166 IPR035897 -
Pral1331g00007 1463 SUPERFAMILY L domain-like 510 750 - -
Pral1331g00007 1463 PRINTS Disease resistance protein signature 297 311 - -
Pral1331g00007 1463 PRINTS Disease resistance protein signature 390 404 - -
Pral1331g00007 1463 PRINTS Disease resistance protein signature 220 235 - -
Pral1331g00007 1463 PRINTS Disease resistance protein signature 696 712 - -
Pral1331g00007 1463 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1165 1428 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1331g00007 Pral-Chr1331 85234 96616 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1331g00007 17 746 WRKY Transcription Factor Family AT4G12020 29.620 1.42e-76 279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1331g00007 - - pcin:129285870 1085.09