LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral1331g00005	ATGGCTATTCAAGTTTCATCCCATAGTTTCGTCGGCAAACCCAAATACAGATTTGATGTTTTTTTGAGTTTTAGAGGCGAAGATACTCGCCATTCCTTTGCTGTGCCTCTCTACAATGCTTTGCGACGTAAGGGAATCAATGTTTTCATTGATGACAAGAAGCTTGGCAAAGGGGAAAAGATTTCACCTACGCTTCTTAAAGCCATTGACAGATCGAGGATTTCCATTATTCTATTCTCCAGCAACTACGCTACTTCTACATGGTGCTTGGATGAACTTGCCCATATAATTCGATGTAAGAATGAGAAGAACCAGGTGGTTATGCCCATCTTTTACAAGGTGGATCCAATGGCTGTTCAGTATCAGAGAGACGGCTTTGCAACAGCCATGGCTGCTCATGAAGATATATTCAGAGATGATCCAGAGAAAGTGCAGAAATGGAAATCTGCTTTGTCAGAAGCAGCTTCTTTATCAAAGGCCTGGATTTTTGAAGATAGGAACGAAATCGGGTTTATGGAAAGGATTGTTAAAGATGCATATGCTATGTTGCCACCTAAACAATTACATAACATTGGGTACATGGTTGGACTTGAGCCTCGTGTGGAAGAAGTGATTTCACTTTTAAATCAATCCAGTGATAGGGTGCATGTTTTTTGTTTGATGTCAAAGAAGCAACAAAGAAATACCAGGGCATCGTTCGCCTCCAACAGAAACTTCTATCAGAGATTCTTGGGGAAAATTACGATGATTGGGAGTGTTGATAAAGGAATATCAAGAATAAAACATAGGCTTTCTCATAAAAGGGTTCTTTTGGTTCTTGATGATGTTGATGAGGTTGAACAGTTAGAACAACTTGCGGGAGGGTGTGACTGGTTTGGTTTTGGAAGCAAAGTTATTATAACAACAAGAAATAAGCAAATGCTAGCTGCACACAATGTTAAAAAAACATTTGAAATGATGAAGCTGAATGAGTATGACTCTTGTGAGCTCTTTTGTTGGCATGCCTTCCATGAGAACCAACCTCCAATAACCTATCAAGATATGTCTAGTCGTGCAATAAGTTATGCACAAGGCCTTCCTCTGGCATTAACAGTCATAGGCTCCAATTTGGCAAATAAAAATTTACAGGAATGGAAGCCTATATTGGAACAATATGAAAGAATCCCAGAAAGAACAATTCATGAAATTCTAAAGATAAGCTATGATTGCTTACAGGCCGGTGCTAAGCGTATTTTCCTAGATATTGCTTGTTTTATTAACGAGGAGATGATGAGATCTATCAAAGAAATAGTAGAAGCTTGTGATTTTGGTGCTAGGTTTTATTTTGAACTTCTTGTCGATAAATCCCTGATAACTTCAGTTGCTGGTGAAGATTATTTTTTTATGCACGATCTAATACGACAAATGGGAAGAGAGATCGTCAGACAAGAGGCACCATTACATCCGGAAAAGCGCAGCAGATTATGGTATTATGAAGACGTTCTTAGAGGATGCAATAATATTGAAGGAATAATGCTTGATCCTCCTCAACAAGAAAAAGTAAAGTGGAGTGGTATGACCTTTGAGAAGATGAATAATCTTAGAATTCTTGTCATTCGAAATGTCCAACTTTCAACTGGCCCCACCTATCTTCCCAATAATTTAAGGTGGCTTGAATGGGAGGGATATCCTTTGGCAGCTTTGCCAAAAGATTTTTCTCCTTCAGAACTAATTTTCTTGAAGTTACCTGAAAGTTCTTTTATACTAGAAGAACCACTGAAGATTTTTACTAGCTATGTGGCACATTTGGATTTTTCATTTTGTCAATTCATAACTGAAGTACCTGATATGGCTCAATGTCAATGTTTACGAATATTGGATTTGCACCGCTGTCACAATCTGATAAAAATCCATGATTCATTGGGATCCCTCTCTAAGCTGATCAAATTAGATGTTGGAAAATGCACCAAACTTTCCATTTTTCCACGTGAAGTCAAGATGGCATCACTTGAATGGCTTAGTTTTAGAGGATGCACGAGTCTTGAGTACTTCCCGCATGTAGCGGGAAAGATGGATGCACTAGGCTACATGTCAATAAGTTGCACTGCTATTAAGGAGCTCCCACCGTCCATTGGAAATCTTTCGGGGCTTCGACATTTAGGCGCGTACTCCTGCAGAAGTCTTAGAGAACCTCCAACCAGCTTATTCATGTTGCCAAATCTTGAGAAGCTTGGTTGCGGAGGCGTTCATCCTCGTAACAGAAAATCTTGGATGAAGTTAATGCAAGATAGCCAACCAATTATCAGCAAGTGTTCTGTGAAGTATTTGAGTCTCGAGAATTGTGGTCTGTTGGATGAAGAACTTCACCTAATTCTGAATTGTTTTCGAAATTTGCGAGAGTTATATGTATCATGGAATGACTTTGCGTCTCTCCCTAAGTGCATTAAAGATTGTGCTGAGCTGCGGCGGCTAGATGTGATTGACTGCCGGAGGCTAAGAGACATACCAGAGTTGCCATCAAAGCTGAATTACATAGATGCAACGAATTGCACATCATTAACCGCAGAATCATTGGACAACTTATATTCTCAGGCAAAAAAGGAGTTGCTTGCCTTGCTAATCAATGTGCCAGCAACAACAATTCCTGATTGGTTCAACCATTGCGGTGAAGGAGGCACGTTGTCTTTTCGCGTTCGTGGGAATTTACCTCGTGCTATTCTTGCATTTGAGGTCGAGTGGAATGCGAACAGGAGAAGGGAACAGATCCTCCCAATTTTTATGAGTATTAACGGTCTCCAAGTAATTAAACCTGATTTTGATGCATTTAAAAAAGACCCTTGTAAAACATGGCATGTTCACGCTCGACAAGGTAGTTTGTTATTAGTTGACTGCTTTCAGCACTCTACGAAAGAAGAGCAAAAGCGTCTCAACAAGTATATGGGGTTGGATTGGAATGACGTGGAACTACAAGTTATGAGTGACTCTATAGTTAAGTGGGGAGTTTATGTCTACGAGGAAACAAACATGGCGAATGTGCAGTTCAAGTCTTCTCATGCTTCAACAGCATCACTGAATCAAAGAGCAATGACTTCCCCTCCTAATTGTGAACCACCCAAGAAGCTCCTCAGAACTGATAAATGA	3120	0.3994	MAIQVSSHSFVGKPKYRFDVFLSFRGEDTRHSFAVPLYNALRRKGINVFIDDKKLGKGEKISPTLLKAIDRSRISIILFSSNYATSTWCLDELAHIIRCKNEKNQVVMPIFYKVDPMAVQYQRDGFATAMAAHEDIFRDDPEKVQKWKSALSEAASLSKAWIFEDRNEIGFMERIVKDAYAMLPPKQLHNIGYMVGLEPRVEEVISLLNQSSDRVHVFCLMSKKQQRNTRASFASNRNFYQRFLGKITMIGSVDKGISRIKHRLSHKRVLLVLDDVDEVEQLEQLAGGCDWFGFGSKVIITTRNKQMLAAHNVKKTFEMMKLNEYDSCELFCWHAFHENQPPITYQDMSSRAISYAQGLPLALTVIGSNLANKNLQEWKPILEQYERIPERTIHEILKISYDCLQAGAKRIFLDIACFINEEMMRSIKEIVEACDFGARFYFELLVDKSLITSVAGEDYFFMHDLIRQMGREIVRQEAPLHPEKRSRLWYYEDVLRGCNNIEGIMLDPPQQEKVKWSGMTFEKMNNLRILVIRNVQLSTGPTYLPNNLRWLEWEGYPLAALPKDFSPSELIFLKLPESSFILEEPLKIFTSYVAHLDFSFCQFITEVPDMAQCQCLRILDLHRCHNLIKIHDSLGSLSKLIKLDVGKCTKLSIFPREVKMASLEWLSFRGCTSLEYFPHVAGKMDALGYMSISCTAIKELPPSIGNLSGLRHLGAYSCRSLREPPTSLFMLPNLEKLGCGGVHPRNRKSWMKLMQDSQPIISKCSVKYLSLENCGLLDEELHLILNCFRNLRELYVSWNDFASLPKCIKDCAELRRLDVIDCRRLRDIPELPSKLNYIDATNCTSLTAESLDNLYSQAKKELLALLINVPATTIPDWFNHCGEGGTLSFRVRGNLPRAILAFEVEWNANRRREQILPIFMSINGLQVIKPDFDAFKKDPCKTWHVHARQGSLLLVDCFQHSTKEEQKRLNKYMGLDWNDVELQVMSDSIVKWGVYVYEETNMANVQFKSSHASTASLNQRAMTSPPNCEPPKKLLRTDK	1039

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral1331g00005	1039	Gene3D	-	13	190	IPR035897	-
	Pral1331g00005	1039	Gene3D	Ribonuclease Inhibitor	495	681	IPR032675	-
	Pral1331g00005	1039	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	19	759	IPR044974	GO:0006952
	Pral1331g00005	1039	SMART	till_3	17	157	IPR000157	GO:0007165
	Pral1331g00005	1039	SUPERFAMILY	L domain-like	505	854	-	-
	Pral1331g00005	1039	ProSiteProfiles	TIR domain profile.	16	183	IPR000157	GO:0007165
	Pral1331g00005	1039	FunFam	Disease resistance protein (TIR-NBS-LRR class)	14	184	-	-
	Pral1331g00005	1039	SUPERFAMILY	Toll/Interleukin receptor TIR domain	13	157	IPR035897	-
	Pral1331g00005	1039	MobiDBLite	consensus disorder prediction	1016	1039	-	-
	Pral1331g00005	1039	Gene3D	Ribonuclease Inhibitor	682	881	IPR032675	-
	Pral1331g00005	1039	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	192	415	IPR027417	-
	Pral1331g00005	1039	Gene3D	-	321	405	IPR042197	-
	Pral1331g00005	1039	Pfam	NB-ARC domain	257	402	IPR002182	GO:0043531
	Pral1331g00005	1039	Gene3D	-	194	318	IPR027417	-
	Pral1331g00005	1039	PRINTS	Disease resistance protein signature	263	277	-	-
	Pral1331g00005	1039	PRINTS	Disease resistance protein signature	356	370	-	-
	Pral1331g00005	1039	PRINTS	Disease resistance protein signature	635	651	-	-
	Pral1331g00005	1039	Pfam	TIR domain	18	178	IPR000157	GO:0007165
	Pral1331g00005	1039	SUPERFAMILY	"Winged helix" DNA-binding domain	392	495	IPR036390	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral1331g00005	Pral-Chr1331	63401	68912	Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral1331g00005	12	741	WRKY Transcription Factor Family	AT4G12020	29.278	4.70e-73	264

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral1331g00005	-		-	pcin:129285870	1097.03