Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1331g00003 ATGATCACTCCAAATCAAGAGCCATCATCATCTTCTGGATCATCCTCCAGCGAATCAACTTCCCATCATTACGATGTTTTCCTGAATTCCACAAGCGAATCAACATTCACTACCATTCTCTGCGATGCTTTGCACAACAAGGGAATCGACAAAATCTTCGTCGGCCCCAATAAACTGAGAGAAAGGAAAAGAAAGAGGAAAAGCAAACAAGTTTTTGCATCACCTGATCCTCTTAGTGCGATTGAAAAATCAAAGGTTTCTATTCTTGTGTTCTCTGAGGATTATGCTTCTTCCGCTGAGTGCCTTGATGAGCTCGTCAAGATTATGAAGTGCAGTAGGAAAAAGAAGCTTGTGGTTTTTCCGATCTTCTACAAAATAGAACCGACGATTGTTCGGCATCAGAAAGATAAGTATGAAGAAGCCATGGTTGCTCATCAACAGAGCTTCGGAGACGAACAGGTTCAGAAATGGAAGTCGGCGTTGAACGAAGCCGCCGGTTTGTCCGGATGGCATTTTGTTGAAGGATCTGAAAATGACTTTGTTGAGAAGATTGTTGAAGAGGCATTTTCCAAGTTACCGCCTAAACGCTTACATATTGGGGAGCACATAGTTGGACTCGACGCTTGCATAAAAGATGTCACTTCACTTCTTGATGCCGTGTCTATTTTAGGAATTCATGGAACTGAAGGAGTTGGCAAAACTACACTTGCTAAAGCTGCATATAATTCAGTTGTCCCCCAATTTGAAGAGGCTTGTTTTCTTACTGACATAAGAACAGCTCCTAAAGGAAGCAAAGGCATGGTACGTCTTCAAAAGACGCTTCTATCAGATATTCTTGATGAGAAGAAAAAGTTCAAGTTAAGAAGTGTTGAAGAAGGGATCTCTAAGATAAAGCAGAGGCTATGCCATGGAAGGGTTCTTCTTGTTCTTGATGACATAGATGAGATGGAACAATTAGAACAACTTGCGGGAGGTCGTGATTGGTGTGGAAATGGCAGTAAAGTGATCGTGACAACAAGAAATAAGCAATTACTGATTGCTGGTCATATTGATGAATATGGAATGAAGGAGCTAAATAACAATGACTCCCTTGAGCTTTTCTCTCGATATGCCTTCCACTTGGACAAACCCCCAGCGGATTATGAAGAAATCTCCAACCATCTGGTGAGTTATGCACAAGGCCTTCCTTTGGCTTTGAAAGCTATGGGCTCTAAATTGAAAAATAAAAGCATGGAGGCATGGAAATGTGCATTGGATCAATTGGAGAAACTTCCAGAAAGGAAGGTTGAAGATGTTCTCAAAATAATGGGAAAGTAG 1317 0.4131 MITPNQEPSSSSGSSSSESTSHHYDVFLNSTSESTFTTILCDALHNKGIDKIFVGPNKLRERKRKRKSKQVFASPDPLSAIEKSKVSILVFSEDYASSAECLDELVKIMKCSRKKKLVVFPIFYKIEPTIVRHQKDKYEEAMVAHQQSFGDEQVQKWKSALNEAAGLSGWHFVEGSENDFVEKIVEEAFSKLPPKRLHIGEHIVGLDACIKDVTSLLDAVSILGIHGTEGVGKTTLAKAAYNSVVPQFEEACFLTDIRTAPKGSKGMVRLQKTLLSDILDEKKKFKLRSVEEGISKIKQRLCHGRVLLVLDDIDEMEQLEQLAGGRDWCGNGSKVIVTTRNKQLLIAGHIDEYGMKELNNNDSLELFSRYAFHLDKPPADYEEISNHLVSYAQGLPLALKAMGSKLKNKSMEAWKCALDQLEKLPERKVEDVLKIMGK 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1331g00003 438 PRINTS Disease resistance protein signature 222 237 - -
Pral1331g00003 438 PRINTS Disease resistance protein signature 392 406 - -
Pral1331g00003 438 PRINTS Disease resistance protein signature 300 314 - -
Pral1331g00003 438 MobiDBLite consensus disorder prediction 1 20 - -
Pral1331g00003 438 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 196 435 IPR027417 -
Pral1331g00003 438 SMART till_3 23 167 IPR000157 GO:0007165
Pral1331g00003 438 ProSiteProfiles TIR domain profile. 22 192 IPR000157 GO:0007165
Pral1331g00003 438 Pfam TIR domain 24 192 IPR000157 GO:0007165
Pral1331g00003 438 Pfam NB-ARC domain 221 424 IPR002182 GO:0043531
Pral1331g00003 438 SUPERFAMILY Toll/Interleukin receptor TIR domain 13 170 IPR035897 -
Pral1331g00003 438 Gene3D - 357 436 IPR042197 -
Pral1331g00003 438 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 24 424 IPR044974 GO:0006952
Pral1331g00003 438 SMART AAA_5 219 380 IPR003593 GO:0016887
Pral1331g00003 438 Gene3D - 20 192 IPR035897 -
Pral1331g00003 438 Gene3D - 193 351 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1331g00003 Pral-Chr1331 25791 29921 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1331g00003 66 404 WRKY Transcription Factor Family AT4G12020 27.035 2.96e-34 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1331g00003 - - pcin:129286951 684.871