Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1331g00002 ATGGGGGTTGGATGGAACCAGTTTGGATTATGGTTCAAAATATATGTTGCCTTGATTTCTTTGTGGGAAATTCGAGTGTGTTGGTCGCTGAACAGCGAAGGGTTAGCCTTGTTGGAGTTTCGAGATAGAATAACATGTGATCCTTATGGAGCTTTGGTGAATTGGAATCCAAATGACGGTGACCCTTGCAAATGGTTGGGTGTTCATTGCATTGACAGTAAAGTTCAAATTCTAGACTTAAACTCCTTATCTTTGGAAGGGACATTGGCCCCAGAGCTTGGGAAGCTTAGTCACTTAAAATCTCTTGTGTTGTGTAAGAACAATTTCTCTGGAACCGTTCCCAAGGGACTTGGAGCTTTAGCCAAACTGGAGTTATTGGATTTGAGGAGCAATAACTTTACTGGAACTATTCCAGTGGAAGTTAGCAGCTTATCAGAACTGAAACACTTGTTGCTTTGCGGCAATAAAATTGAAGTCAATGTTTGTCAGGATGTTGAAAAGTCCAATTTACCCTCTAAATGGTTATTTGTCGACAAGTGTACTTCATCTATAACATCTGTTTTTGGTGGCTTGCATAGAAAATTTGGAAATGGTGTATGGCAGAGAAATTTTATACTGTTAAACAAGGCTGTTTCTAGAGTTATTCAAATTAAAGGAGAACTTGTGAAATACTTCAATGCTTTGGTGCTGCCACTGTTGAAGCTGGATAAAGCTCTTGATCTTTGTCAAGTGAATTTCTATCACAATCAACATGATTTTCATGAGCCTGTGGTTGCCCAAACTATAACAACCCTCATCAATTCCGTACGTCGCAGGTTGCTTGATCAATCTAGTAACCTCGCAGCTGCAGCTGCACCTGTCAGTGTTGGTCCTACCAAACCAATTGTTTCTCTTCCAGCAACCTTGAGTAGTGGAGCTTTCCCGGCTGTGCCACATGCCAAGCAACAAAATCTATCTCCTGCACCGCCTCCAACTGCTAATTCCCCACCTAATACACCAAATCAAGACCAAACTTCTACATGGAAACAAGAGCATTCAACTAAAGGCACTTCTGGAAATTTGTGGCTTTATATAATTATTATCATTTCATTTGTGGTTGCGTTGGTCATTATTGCTGTGACTATATTCTGTTTGTGGCGAGCGCGAGCAGCCAAAACAATAAGCCCTTGGAAAACAGGGATAAGTGGACAATTACAAAAGGCGTTTGTAACAGGGGTTCCCAAAGTGAATCGACCAGAGCTGGAGACAGCCTGTGAGGATTTCAGCAATATTATTGATAATTTTGATTATTACACCATATACAAAGGAACACTGTCGAGTGGAGTTGAGATTGCTGTTGTTTCTACTAATGTCACTTCTTCTAAAGAATGGTCAAAGAATGCAGAGATGTTCTACCGGAAAACGATTAGTACATGGTCTCGTGTGAATCATAAGAACTTCATAAATCTTATTGGTTTCTGTGAGGAAGAAGAACCATTCACAAGGATGATGATTTTTGAGTATGCTCCTAATGGTTCCTTGTTTGAGCATCTCCATGTTAAGGAAGATGAATATCTTGATTGGAGTGCAAGGACGAGGATTGTTATGGGAATTGCTTATTGTTTGCAGTACATGCACCATGATCTAAATCCACCAGTATCTCATTCCGATCTTAGTTCATCTTCCATTTATTTAACAGATGACTTTGCTGCCAAGATAGCATATATGAGTTTTGACAACCCATCCATACTAGAAGACAAGTCAACCGAAGAAAAAGTATCTAGCCATTCTCAGTTGCCACCCAAAGCAAATCCTGAAACAAATGTTTATAATTTTGGAATGGTGTTGCTTGAAATAATTTCTGGAAAGCTCCCTTACTCTGAAGAACATGGTCATCTCACTGAATTGGCCGCCGATCACATCAAAAACAACAGAAGCATCAATTATATGATCGATCCCATTCTCCAATCATACGAACAGGATCAACTTGATGTGATCTGTGAAGTAATACAAGATTGCATCCAAACAGATGCAAGGTTCAGACCTCCAATGAAGGATGTAGTTTCCAAATTGAGAGCAGTCATTAATATATCACCTGAACAAGCGGTTCCGAGACTTTCTCCTCTTTGGTGGGCTGAACTGGAAATATTGTCTCTTGAGGCCAATTAA 2148 0.3999 MGVGWNQFGLWFKIYVALISLWEIRVCWSLNSEGLALLEFRDRITCDPYGALVNWNPNDGDPCKWLGVHCIDSKVQILDLNSLSLEGTLAPELGKLSHLKSLVLCKNNFSGTVPKGLGALAKLELLDLRSNNFTGTIPVEVSSLSELKHLLLCGNKIEVNVCQDVEKSNLPSKWLFVDKCTSSITSVFGGLHRKFGNGVWQRNFILLNKAVSRVIQIKGELVKYFNALVLPLLKLDKALDLCQVNFYHNQHDFHEPVVAQTITTLINSVRRRLLDQSSNLAAAAAPVSVGPTKPIVSLPATLSSGAFPAVPHAKQQNLSPAPPPTANSPPNTPNQDQTSTWKQEHSTKGTSGNLWLYIIIIISFVVALVIIAVTIFCLWRARAAKTISPWKTGISGQLQKAFVTGVPKVNRPELETACEDFSNIIDNFDYYTIYKGTLSSGVEIAVVSTNVTSSKEWSKNAEMFYRKTISTWSRVNHKNFINLIGFCEEEEPFTRMMIFEYAPNGSLFEHLHVKEDEYLDWSARTRIVMGIAYCLQYMHHDLNPPVSHSDLSSSSIYLTDDFAAKIAYMSFDNPSILEDKSTEEKVSSHSQLPPKANPETNVYNFGMVLLEIISGKLPYSEEHGHLTELAADHIKNNRSINYMIDPILQSYEQDQLDVICEVIQDCIQTDARFRPPMKDVVSKLRAVINISPEQAVPRLSPLWWAELEILSLEAN 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1331g00002 715 FunFam Inactive receptor-like serine/threonine-protein kinase 393 501 - -
Pral1331g00002 715 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Pral1331g00002 715 SUPERFAMILY L domain-like 28 160 - -
Pral1331g00002 715 Gene3D Ribonuclease Inhibitor 29 191 IPR032675 -
Pral1331g00002 715 MobiDBLite consensus disorder prediction 313 348 - -
Pral1331g00002 715 Gene3D Phosphorylase Kinase; domain 1 396 501 - -
Pral1331g00002 715 ProSiteProfiles Protein kinase domain profile. 419 688 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1331g00002 715 SUPERFAMILY Protein kinase-like (PK-like) 405 684 IPR011009 -
Pral1331g00002 715 Gene3D Transferase(Phosphotransferase) domain 1 502 696 - -
Pral1331g00002 715 Pfam Leucine rich repeat 97 157 IPR001611 GO:0005515
Pral1331g00002 715 FunFam Leucine-rich repeat receptor-like kinase 35 144 - -
Pral1331g00002 715 PANTHER PROTEIN MALE DISCOVERER 2 19 712 - -
Pral1331g00002 715 MobiDBLite consensus disorder prediction 331 348 - -
Pral1331g00002 715 Pfam Protein tyrosine and serine/threonine kinase 432 684 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1331g00002 Pral-Chr1331 18670 22954 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1331g00002 75 697 Receptor kinase-like Gene Family AT5G65700 25.108 5.30e-45 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Pral1331g00002 PK_Tyr_Ser-Thr 3.6e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1331g00002 - - qsa:O6P43_012777 850.892