Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1330g00003 ATGGCTATCCTTCCTTATTTGCTTGTTCTTCCCAATCTGCTTTTGTTCTTCCCTAGATTTTCTTTTGCAACTGATACCCTCACCCAGTTCGAGTCTCTTCCTGACGGCCAGACCTTGGTTTCTGAAAATGAAATCTTTGAATTGGGTTTCTTTAGCCCTGGTAGTTCCACAGACCGCTATGTTGGAGTCTGGTACCACAAAATCCCAGGTAAAACTGTTGTTTGGGTTGCCAACCGAGGCAGACCTATCAAAAACAACTTTGGCATGTTGAGAATAAACACAGAGGGACATCTTGTGCTTCTTGGCCAAAACGAGACAGTTGTTTGGTCAGGAAATTCCACCACAAAAGCTTGGAGTCCAATTGTGCAGCTTTTAGGCTCTGGAAACTTGGTTCTAAGAGATGGGAAAGATCAAAAGCCTCACAACTATTTGTGGCAAAGCTTTGACTATCCTTCTGATTCAATTTTGCCAGGAATGAAGCTTGGATGGGACCTCAGAACTGGTCTCAATCGACGTTTTACAGCATGGAAGAATTGGGATGACCCTTCCTTTGGAGACCTTACAGATGAACTTGTACTACACAATTATCCTGAAGACGTAGTCAGGCAGGGCACAACAGAGTATATAAGGAGTGGTCCCTGGAATGGTGTCCGGTTCAGTGGCATTTCTCATGCAACGAACAATCCACTTCATGAAGGAGAGTTTGTCTGGAATAAAGATGAGGTGTATTTCGTTTATAATGTGAGAAATGAGTCACTGATTACCAGATTTGTCTTGAACCAGACATTATACTCAGTACTGGACATGATATGGATTGAAGAAGATCAAAGGTGGATCACTTTCAGTTATATACCGATTGATAACTGCGATAGATATAGCCGTTGTGGCCCTAATGGAAACTGCGTTGAGGGTGAAACACCAATTTGTCAGTGCTTGACGGGCTTTTTTCCAAAATCACCCAAGAGATGGAATGCAATGGACTGGTCTGAAGGATGCACCCGTAATGAATCATGGAGTTGCAAGGAAAAAAACAGGGATTATTTTGTCAAATTTAGTGGGCTCAAATTGCCAGATACTAAATATTCTTGGGTCAATGCAAGTATGACACTTGTGGAATGCAAAGCCAAATGCTGGGAAAATTGTTCTTGTACTGCTTATGCTAATTTAGATGTCAGGGGAGGAGGAAGTGGTTGTGCTATGTGGTTCGGTGATTTAATTGATATAAGGCAGATTCCCTTTGATGACCAGGATTTATATATTCGCCTTGCTTCTCCAGAAACAGCTGAACAGGATGGAGCTAATGGAAATACAACAATGGTGATTACAGCACTGGTGACCATTGTATTGGCTATTATGATGCTTTTCACTTTGTTTTGCGTTTGCAAGCTTAGAAGAAACTCTATAGCAAACAATGAAGAAGGATCTAACGGAAATATGGAGCTAAAAACCTTGATAGCAATAAACAATGAAGAAGGTTATGAAGGAAATACGGAGCAACGTATCTATGACCTTGCAGTAATAGCTAATGCTACTAATAACTTCTCATCAGACAACAAGCTTGGCCAAGGTGGTTTTGGTCCTGTATACAAGGGTATGCTTGTGGACAGACAAGAAATTGCGGTGAAACGTCTTTCACAAAGTTCTTGCCAAGGGCTGCAAGAATTTAAGAATGAAGTCAAATTGTGTGCCAAACTTCAGCACCGTAATCTTGTTAAGGTTCTTGGTTGTTGCATTCAAGGAGAGGAGAAAATGCTCATATATGAATACATGCCCAACAAGAGCTTAGATTCATTTATTTTTGGTTCTAAAAGAAAACTTCTTGATTGGTCCAAGCGCTTTCACATTATCCACGGAATTGCTCGGGGGCTTATGTATCTTCATCAGGATTCTAGATTAAAAATCATCCATAGAGACCTCAAAGCTAGCAATGTATTACTGGATAGTGAATTAAATCCAAAAATATCAGATTTTGGTTTGGCAAGAATATTTGAAGGAGATCAAATTGAAGATAACACAAGACAAATAGTTGGTACATATGGTTACATGGCTCCTGAATACGCAATTCGTGGGCTATTCTCCATCAAATCTGATGTGTTCAGCTTTGGAGTATTGTTATTAGAAATAGTGAGTGGCATGAAAAACAGGGAGCCTTTTTTGCCAAGCCAAAGCATTAATCTTATTGGACATGCATGGAGGTTGTGGAATGAGGGAATCCCACTTGAATTCTCCGATAAACATTTGGGGGAATCTTGCGTTGAATCAGAAGCATTACGATGCATCCATGTTGGTCTTCTTTGTGTGCAATACCATGCTAATGATAGGCCAAACATGACATCTGTTGTCATAATGTTGAGTAGTGAAGGTGTTTTGCCTGAACCTAAAGAACCTGGTTTACTTTTAGAAAACATCCCAATTAAGAGAGAATCTCCTAATAGTCATACAAATCCTTCAATTAATAAAGTATCTATCACCTTGTTAGAAGCCAGGTAA 2490 0.4008 MAILPYLLVLPNLLLFFPRFSFATDTLTQFESLPDGQTLVSENEIFELGFFSPGSSTDRYVGVWYHKIPGKTVVWVANRGRPIKNNFGMLRINTEGHLVLLGQNETVVWSGNSTTKAWSPIVQLLGSGNLVLRDGKDQKPHNYLWQSFDYPSDSILPGMKLGWDLRTGLNRRFTAWKNWDDPSFGDLTDELVLHNYPEDVVRQGTTEYIRSGPWNGVRFSGISHATNNPLHEGEFVWNKDEVYFVYNVRNESLITRFVLNQTLYSVLDMIWIEEDQRWITFSYIPIDNCDRYSRCGPNGNCVEGETPICQCLTGFFPKSPKRWNAMDWSEGCTRNESWSCKEKNRDYFVKFSGLKLPDTKYSWVNASMTLVECKAKCWENCSCTAYANLDVRGGGSGCAMWFGDLIDIRQIPFDDQDLYIRLASPETAEQDGANGNTTMVITALVTIVLAIMMLFTLFCVCKLRRNSIANNEEGSNGNMELKTLIAINNEEGYEGNTEQRIYDLAVIANATNNFSSDNKLGQGGFGPVYKGMLVDRQEIAVKRLSQSSCQGLQEFKNEVKLCAKLQHRNLVKVLGCCIQGEEKMLIYEYMPNKSLDSFIFGSKRKLLDWSKRFHIIHGIARGLMYLHQDSRLKIIHRDLKASNVLLDSELNPKISDFGLARIFEGDQIEDNTRQIVGTYGYMAPEYAIRGLFSIKSDVFSFGVLLLEIVSGMKNREPFLPSQSINLIGHAWRLWNEGIPLEFSDKHLGESCVESEALRCIHVGLLCVQYHANDRPNMTSVVIMLSSEGVLPEPKEPGLLLENIPIKRESPNSHTNPSINKVSITLLEAR 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1330g00003 829 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 19 148 - -
Pral1330g00003 829 Pfam D-mannose binding lectin 72 177 IPR001480 -
Pral1330g00003 829 Gene3D - 20 148 IPR036426 -
Pral1330g00003 829 CDD STKc_IRAK 520 784 - -
Pral1330g00003 829 ProSiteProfiles PAN/Apple domain profile. 340 423 IPR003609 -
Pral1330g00003 829 Pfam PAN-like domain 340 408 IPR003609 -
Pral1330g00003 829 CDD B_lectin 31 151 IPR001480 -
Pral1330g00003 829 ProSiteProfiles Protein kinase domain profile. 514 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1330g00003 829 PIRSF SRK 1 829 IPR024171 GO:0004674
Pral1330g00003 829 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 339 422 - -
Pral1330g00003 829 Gene3D Phosphorylase Kinase; domain 1 488 589 - -
Pral1330g00003 829 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 182 IPR036426 -
Pral1330g00003 829 SMART serkin_6 514 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1330g00003 829 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 13 775 - -
Pral1330g00003 829 SMART blect_4 30 151 IPR001480 -
Pral1330g00003 829 CDD PAN_AP_plant 339 423 - -
Pral1330g00003 829 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 590 792 - -
Pral1330g00003 829 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 479 589 - -
Pral1330g00003 829 Gene3D Hepatocyte Growth Factor 339 421 - -
Pral1330g00003 829 Gene3D Transferase(Phosphotransferase) domain 1 590 789 - -
Pral1330g00003 829 Pfam S-locus glycoprotein domain 210 319 IPR000858 GO:0048544
Pral1330g00003 829 Pfam Protein tyrosine and serine/threonine kinase 517 718 IPR001245 GO:0004672|GO:0006468
Pral1330g00003 829 ProSiteProfiles EGF-like domain profile. 285 321 IPR000742 -
Pral1330g00003 829 SMART ntp_6 343 422 IPR003609 -
Pral1330g00003 829 ProSitePatterns Serine/Threonine protein kinases active-site signature. 634 646 IPR008271 GO:0004672|GO:0006468
Pral1330g00003 829 SUPERFAMILY Protein kinase-like (PK-like) 500 812 IPR011009 -
Pral1330g00003 829 ProSiteProfiles Bulb-type lectin domain profile. 24 145 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1330g00003 Pral-Chr1330 50917 62377 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1330g00003 432 802 Receptor kinase-like Gene Family AT4G23230 51.070 1.90e-121 378
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral1330g00003 PK_Tyr_Ser-Thr 1.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1330g00003 - - pcin:129322539 1018.45