Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1330g00002 ATGGCTATCCTTCCTTATTGGCTTGTTCTTCCCAATCTGCTTTTGTTCTTCTCCAGATTTTCTTTTGCAGCTGATACCCTCACCCAGTCCGAGTCTCTTCCTGACGGCCAGACCTTGGTTTCTGAAAATGAAATCTTTGAATTGGGCTTCTTTAGCCCTGGTAGTTCCACAGACCGCTATGTTGGAATCTGGTACCACAAAATCCCAGGTAGAACTGTTGTTTGGGTTGCCAACCGAGGCAGACCCATCAAAAACAACTTTGGCATGTTGAGAATAAACACACACGGACATCTTGTGCTTCTTGGCCAAAATGAGACAGTTGTTTGGTCAGGAAATTGCACCACAAGGGCCTCGAGTCCAATTGTGCAGCTTTTAGGCTCTGGAAACTTGGTTCTAAGAGACGGGAAAGATCAAAAGCCTCACAAGTACTTGTGGCAAAGCTTTGACTATCCTTCTGATTCAATTTTGCCAGGAATGAAGCTTGGGTGGGACCTTAGAACTGGTCTCAATCGACGTTTTACAGCATGGAAGAATTGGGATGACCCTTCCTTTGGAGGCCTCACAGTTGAACTTTTATTACACAATTATCCTGAAGAGGTCGTCTGTCAGGGCACAACAGAGTATATGAGAAGCGGTCCCTGGAATGGTGTTCGGTTCAGTGGCATGTCTCATGTGACGAACAATCCAAGTTATGAAGGAAAGTTTGTCTGGAATAAAGATGAGGTGTATTCAGTTCTTAATGTGAAAAATGAGTCACTGATTACAAGAGTTGTCTTGAACCAAACATTATACTTAGTACTGGACATGATATGGATTGAAGAAGATCAAAGGTGGACTATTTTCAGTTATATACCAATTGATAACTGCGATAGATATAGCCGTTGTGGCCCGAATGGAAACTGCGTTGAGGGCGAGGCACCAATTTGTCAGTGCTTGACGGGCTTTTTTGCAAAATCACCCAAGAAATGGAATGCAATGGACTGGTCTGAAGGATGTGTCCGCAATAAATCATGGAGTTGCAAGGACAAAAACAGGGATTATTTTGTCAAATTTAGTGGGCTCAAATTGCCAGATACTAAATATTCTTGGGTCAATGCAAGTATGACACTTGTGGAATGCAAAGCCAAATGCTGGGAAAATTGTTCTTGTAATGCTTATGCTAATTTAGATGTCAGGGGAGGAGGAAGTGGTTGTGCCATGTGGTTCGGTGATTTAATTGATATAAGGCAGATGTGGTTCGGTGATGTGATTGATATAAGGCAGAATTCCTTTGATGACCAGGATTTATATATTCGCCTTGCTTCTCCAGAAACAGCTGAACAGGATGAAGCTAATGGAAATAAGACAATGGTGATTACTGTACCGATAACTACTGTATTGGCTATTATGATGCTTTTCACTTTGTTCTGCATTTACAAGCGCAGAAGAAACTCTATAGCAAACAATGAAGAAGGATCTGACGGAAATATGGAGTTAAAAACCTTGATAGCAATAAACAATGAAGAAGGTTATGAAGGAAATACGGAGCAACGTATCTATGACCTTGCAGTAATAGCTAATGCTACTAATAACTTCTCATCAGACAACAAGCTTGGCCAAGGTGGTTTTGGTCCTGTATACAAGGGTATACTTGTAGACGGACAAGAGATTGCGGTCAAACGGCTTTCACAAAGTTCTTGCCAAGGGCTGTGTGAATTTAAGAATGAAGTCAAATTGTGTGCCAAACTTCAGCACCGTAATCTTGTTAAGGTTCTTGGTTGTTGCATTCAAAGAGAGGAGAAAATGCTCATATATGAATATATGCCCAACAAGAGCTTAGATTCATTTATTTTTGGTTCTGAAAGTAAACATCTTGATTGGTCTAAGCGTTTTCATATTATCCACGGAATTGCTCGAGGACTTATGTATCTTCATCAAGATTCTAGATTAAAAATCATCCATAGAGACCTCAAAGCAAGCAATATATTATTGGATAGTGAATTAAATCCAAAAATATCAGATTTTGGTTTGGCAAGAATATTTGGTGGAGATCAAATTGAAGATAACACAAGACAAATAGTTGGTACATATGGTTATATGGCTCCTGAGTACGCCATTCGTGGGCAATTCTCCGTCAAATCTGATGTGTTCAGTTTTGGAGTATTATTGTTAGAAATAGTGAGCGGCATGAAAAACAGGGGACCCATTTTGCCTAGTCAAAGTATTAATCTTATCGGACATGCATGGAGGTTGTGGAAGCAGGGAATCCCACTAAACTTTGCCGATGAATGTTTGGGGAAGTCTTGCGTTAAATTAGAAGTACTGCGATGCATCCACATCGGTCTTCTTTGTTTGCAATACCATGCTGATGATAGGCCAGACATGACATCTGTGGTTATAATGTTGAGTAGTGAGGGTGTCTTGCCTGAGCCCAAAGAACCTGGTTTTCTCTTAGAACACATTCCAGTTAGAGAAGAATCTCCTCACAATCATACAGCTCTTTCAAATAATGAAGTGTCTATCACTTTGTTAGAAGCCAGATTTTCTTTTGCAATTGATACCCTCACCCAGTTTGAGTCTCTTCCTGATGGCCAGACCTTGGTTTCTGAAAATGAAATCTTCGAAATGGGTTTCTTCAGCCCTGGTAGTTCCACAGACCGCTATGTTGGAATCTGGTACCACAACATCCCAGGTAGAACTGTTGTTTGGGTTGCCAACCGAGGCAGACCCATCAAAAACAACTTTGGCATGTTGAGAATAAACACAGAGGGACATCTTGTGCTTCTTGGCCAAAACGAGACAGTTGTTTGGTCAGGAAATTCCACCACAAAGGCTTTTAGTCCAATTGTGCAGCTTTTAGGCTCTGGAAACTTGGTTCTAAGAGATGGGAAAGATCAAAAGCCTCACAACTATTTGTGGCAAAGCTTTGACTATCCTTCTGATTCAATTTTGCCAGGAATGAAGCTTGGATGGGACCTCAGAACTGGCCTCAATCGACGTTTTACAGCATGGAAGAATTGGGATGACCCTTCCTTTGGAGGCCTTACAAATGAACTTGTACTACACAATTATCCTGAAGAAGTAGTCAGGCAGGGCACAACAGAGTATATAAGGAGCGGTCCCTGGAATGGTGTCCGGTTCAGTGGCATTTCTCATGCGACGACCAATCCACTTCATGAAGGAGAGTTTGTCTGGAATAAAGATGAGGTGTATTCAGTTTATAATGTGAAAAATGAGTCACTGATTACAAGATTTGTCTTGAACCAGACATTATACTCACTACTGGACATGATATGGATTGAAGAAGATCAAAGGTGGATCACTTTCAGTTATATACCGATTGATAACTGCGATAGATATAGCCGTTGTGGCCCTAATGGAAACTGCGTTGAGGGTGAGACACCAATTTGTCAGTGCTTGACGGGCTTTTTTCCAAAATCACCCAAGAGATGGAATGCAATGGACTGGTCTGAAGGATGCACCCGTAATGAATCATGGAGTTGCAAGGAAAAAAACAGGGATTATTTTGTCAAATTTAGTGGGCTCAAATTGCCAGATACTAAATATTCTTGGGTCAATGCAAGTATGACACTTGTGGAATGCAAAGCCAAATGCTGGGAAAATTGTTCTTGTACTGCTTATGCTAATTTAGATGTCAGGGGAGGAGGAAGTGGTTGTGCTATGTGGTTCAGTGATTTAATTGATATAAGGCAGATTCCCTTTGATGACCAGGATTTATATATTCGCCTTGCTTCTCCAGAAACAGCTGAACAGGATGGAGCTAATGGAAATAAAACAATGGTGATTACTGCACCGGTGACCACTGTATTGGCTATTATGATGCTTTTCACTTTGTTCTGCTTTTACAAGCGTAGAAGAAACTCTATGGTTGCGTTTGAAACCTTGCTAACAGCGAACAATGAAGAAGGATCTAACGGAAACATGGAGCTAAAAACCTTGATAGCAATAAACAATGAAGAAGGTTATGAAGGAAATACGGAGCAACGTATCTATGACCTTGCGGTAATAGCTAATGCTACTAATAACTTCTCATCAGACAACAAGCTTGGCCAAGGTGGTTTTGGTCCTGTATACAAGGGTATACTTGTGGACGGACGAGAAATTGCGGTGAAACGGCTTTCACAAAGTTCTTGCCAAGGGCTGCAAGAATTTAAGAATGAAGTCAAATTGTGTGCCAAACTTCAGCACCGTAATCTTGTTAAGGTTCTTGGTTGTTGCATTCAAGGAGAGGAGAAAATGCTCATATATGAATACATGCCCAACAAGAGCTTAGATTCATTTATTTTTGGTTCTAAAAGAAAACTTCTTGATTGGTCCAAGCGCTTTCACATTATCCACGGAATTGCTCGGGGGCTTATGTATCTTCATCAGGATTCTAGATTAAAAATCATCCATAGAGACCTCAAAGCTAGCAATGTATTACTGGATAGTGAATTAAATCCAAAAATATCAGATTTTGGTTTGGCAAGAATATTTGGAGGAGATCAAATTGAAGATAACACAAGACAAATAGTTGGTACATATGGTTACATGGCTCCTGAATACGCAATTCGTGGGCTATTCTCCGTCAAATCTGATGTGTTCAGCTTTGGAGTATTATTATTAGAAATAGTGAGTGGCATGAAAAACAGGGAGCCTTTTTTGCCAAGCCAAAGCGTTAATCTTATTGGACATGCATGGAGGTTGTGGAATGAGGGAATCCCACTTGAATTCTCCGATAAGCATTTGGGGGAATCTTGCGTTGAATCAGAAGTATTACGATGCATCCATGTCGGTCTTCTTTGTGTGCAATACCATGCTAATGATAGGCCAAACATGACATCTGTTGTCATAATGTTGAGTAGTGAAGGTGTTTTGCCTGAACCTAAAGAACCTGGTTTACTTTTAGAAAATATCCCAATTAAGAGAGAATCTCCTAATAGTCATACAAATCCTTCAAGTAATAAAGTATCTATCACCTTGTTAGAAGCCAGGTAA 4977 0.4055 MAILPYWLVLPNLLLFFSRFSFAADTLTQSESLPDGQTLVSENEIFELGFFSPGSSTDRYVGIWYHKIPGRTVVWVANRGRPIKNNFGMLRINTHGHLVLLGQNETVVWSGNCTTRASSPIVQLLGSGNLVLRDGKDQKPHKYLWQSFDYPSDSILPGMKLGWDLRTGLNRRFTAWKNWDDPSFGGLTVELLLHNYPEEVVCQGTTEYMRSGPWNGVRFSGMSHVTNNPSYEGKFVWNKDEVYSVLNVKNESLITRVVLNQTLYLVLDMIWIEEDQRWTIFSYIPIDNCDRYSRCGPNGNCVEGEAPICQCLTGFFAKSPKKWNAMDWSEGCVRNKSWSCKDKNRDYFVKFSGLKLPDTKYSWVNASMTLVECKAKCWENCSCNAYANLDVRGGGSGCAMWFGDLIDIRQMWFGDVIDIRQNSFDDQDLYIRLASPETAEQDEANGNKTMVITVPITTVLAIMMLFTLFCIYKRRRNSIANNEEGSDGNMELKTLIAINNEEGYEGNTEQRIYDLAVIANATNNFSSDNKLGQGGFGPVYKGILVDGQEIAVKRLSQSSCQGLCEFKNEVKLCAKLQHRNLVKVLGCCIQREEKMLIYEYMPNKSLDSFIFGSESKHLDWSKRFHIIHGIARGLMYLHQDSRLKIIHRDLKASNILLDSELNPKISDFGLARIFGGDQIEDNTRQIVGTYGYMAPEYAIRGQFSVKSDVFSFGVLLLEIVSGMKNRGPILPSQSINLIGHAWRLWKQGIPLNFADECLGKSCVKLEVLRCIHIGLLCLQYHADDRPDMTSVVIMLSSEGVLPEPKEPGFLLEHIPVREESPHNHTALSNNEVSITLLEARFSFAIDTLTQFESLPDGQTLVSENEIFEMGFFSPGSSTDRYVGIWYHNIPGRTVVWVANRGRPIKNNFGMLRINTEGHLVLLGQNETVVWSGNSTTKAFSPIVQLLGSGNLVLRDGKDQKPHNYLWQSFDYPSDSILPGMKLGWDLRTGLNRRFTAWKNWDDPSFGGLTNELVLHNYPEEVVRQGTTEYIRSGPWNGVRFSGISHATTNPLHEGEFVWNKDEVYSVYNVKNESLITRFVLNQTLYSLLDMIWIEEDQRWITFSYIPIDNCDRYSRCGPNGNCVEGETPICQCLTGFFPKSPKRWNAMDWSEGCTRNESWSCKEKNRDYFVKFSGLKLPDTKYSWVNASMTLVECKAKCWENCSCTAYANLDVRGGGSGCAMWFSDLIDIRQIPFDDQDLYIRLASPETAEQDGANGNKTMVITAPVTTVLAIMMLFTLFCFYKRRRNSMVAFETLLTANNEEGSNGNMELKTLIAINNEEGYEGNTEQRIYDLAVIANATNNFSSDNKLGQGGFGPVYKGILVDGREIAVKRLSQSSCQGLQEFKNEVKLCAKLQHRNLVKVLGCCIQGEEKMLIYEYMPNKSLDSFIFGSKRKLLDWSKRFHIIHGIARGLMYLHQDSRLKIIHRDLKASNVLLDSELNPKISDFGLARIFGGDQIEDNTRQIVGTYGYMAPEYAIRGLFSVKSDVFSFGVLLLEIVSGMKNREPFLPSQSVNLIGHAWRLWNEGIPLEFSDKHLGESCVESEVLRCIHVGLLCVQYHANDRPNMTSVVIMLSSEGVLPEPKEPGLLLENIPIKRESPNSHTNPSSNKVSITLLEAR 1658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1330g00002 1658 Pfam Protein tyrosine and serine/threonine kinase 528 729 IPR001245 GO:0004672|GO:0006468
Pral1330g00002 1658 Pfam Protein tyrosine and serine/threonine kinase 1346 1546 IPR001245 GO:0004672|GO:0006468
Pral1330g00002 1658 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1419 1621 - -
Pral1330g00002 1658 ProSiteProfiles Protein kinase domain profile. 1343 1619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1330g00002 1658 ProSiteProfiles EGF-like domain profile. 1106 1142 IPR000742 -
Pral1330g00002 1658 FunFam Os04g0303100 protein 885 1029 - -
Pral1330g00002 1658 ProSiteProfiles Bulb-type lectin domain profile. 845 966 IPR001480 -
Pral1330g00002 1658 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1160 1243 - -
Pral1330g00002 1658 Pfam PAN-like domain 340 408 IPR003609 -
Pral1330g00002 1658 Pfam PAN-like domain 1161 1229 IPR003609 -
Pral1330g00002 1658 FunFam Os04g0303100 protein 64 208 - -
Pral1330g00002 1658 SUPERFAMILY Protein kinase-like (PK-like) 1329 1641 IPR011009 -
Pral1330g00002 1658 CDD B_lectin 30 151 IPR001480 -
Pral1330g00002 1658 ProSitePatterns Serine/Threonine protein kinases active-site signature. 645 657 IPR008271 GO:0004672|GO:0006468
Pral1330g00002 1658 CDD PAN_AP_plant 1160 1244 - -
Pral1330g00002 1658 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 843 1604 - -
Pral1330g00002 1658 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 601 803 - -
Pral1330g00002 1658 CDD PAN_AP_plant 339 434 - -
Pral1330g00002 1658 MobiDBLite consensus disorder prediction 1635 1658 - -
Pral1330g00002 1658 MobiDBLite consensus disorder prediction 1636 1658 - -
Pral1330g00002 1658 Pfam D-mannose binding lectin 893 998 IPR001480 -
Pral1330g00002 1658 Pfam D-mannose binding lectin 72 177 IPR001480 -
Pral1330g00002 1658 ProSiteProfiles PAN/Apple domain profile. 340 424 IPR003609 -
Pral1330g00002 1658 SMART serkin_6 525 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1330g00002 1658 SMART serkin_6 1343 1613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1330g00002 1658 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1463 1475 IPR008271 GO:0004672|GO:0006468
Pral1330g00002 1658 Pfam Domain of unknown function (DUF3403) 796 840 IPR021820 GO:0004674
Pral1330g00002 1658 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 182 IPR036426 -
Pral1330g00002 1658 ProSiteProfiles PAN/Apple domain profile. 1161 1244 IPR003609 -
Pral1330g00002 1658 CDD STKc_IRAK 1349 1613 - -
Pral1330g00002 1658 Gene3D Phosphorylase Kinase; domain 1 1309 1418 - -
Pral1330g00002 1658 Gene3D Phosphorylase Kinase; domain 1 492 600 - -
Pral1330g00002 1658 SMART ntp_6 343 420 IPR003609 -
Pral1330g00002 1658 SMART ntp_6 1164 1243 IPR003609 -
Pral1330g00002 1658 SUPERFAMILY alpha-D-mannose-specific plant lectins 894 1003 IPR036426 -
Pral1330g00002 1658 ProSiteProfiles Protein kinase domain profile. 525 801 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1330g00002 1658 ProSiteProfiles Bulb-type lectin domain profile. 24 145 IPR001480 -
Pral1330g00002 1658 Pfam S-locus glycoprotein domain 1031 1140 IPR000858 GO:0048544
Pral1330g00002 1658 Pfam S-locus glycoprotein domain 210 318 IPR000858 GO:0048544
Pral1330g00002 1658 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 148 - -
Pral1330g00002 1658 CDD STKc_IRAK 531 795 - -
Pral1330g00002 1658 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1308 1418 - -
Pral1330g00002 1658 Gene3D Transferase(Phosphotransferase) domain 1 1419 1618 - -
Pral1330g00002 1658 Gene3D Transferase(Phosphotransferase) domain 1 601 800 - -
Pral1330g00002 1658 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 840 969 - -
Pral1330g00002 1658 CDD B_lectin 852 972 IPR001480 -
Pral1330g00002 1658 SUPERFAMILY Protein kinase-like (PK-like) 511 815 IPR011009 -
Pral1330g00002 1658 ProSiteProfiles EGF-like domain profile. 285 321 IPR000742 -
Pral1330g00002 1658 SMART blect_4 30 151 IPR001480 -
Pral1330g00002 1658 SMART blect_4 851 972 IPR001480 -
Pral1330g00002 1658 Gene3D - 842 969 IPR036426 -
Pral1330g00002 1658 Gene3D - 19 148 IPR036426 -
Pral1330g00002 1658 Gene3D Hepatocyte Growth Factor 1160 1242 - -
Pral1330g00002 1658 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 490 600 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1330g00002 Pral-Chr1330 37326 55568 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1330g00002 450 812 Receptor kinase-like Gene Family AT4G23230 53.151 3.16e-119 388
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral1330g00002 PK_Tyr_Ser-Thr 3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1330g00002 - - tpra:123915292 1831.99