Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1330g00001 ATGGCCATCCTTCCTTCTATGCTTGTTCTTGCCAATATGCTTCTATCAATCTCTGTATTGGTCTCTGCAACTGACATCATTACACGTTCTCAGCCACTTCCTGATGATGGAACAACCACTTTGACGTCTAAAGACGGAATCTTTGAATTGGGTTTCTTCAGTCCAGGTAGTTCCACAAACCGTTATGTTGGAATTTGGTTCAAAAGAATCCGTCGTAGAACTATTGTTTGGGTAGCCAATCGAGAAAAACCAATCAGAGACAATTCAGGAATGTTGAGCTTAAACACACAGGGAAACCTTGTGCTTCTTAGCCAAAATGAAAATATTATTTGGTTGGCAAATTCAACAAGAAAGGCCTTGAGTCCAATTGTACAGCTTTTAGACTCAGGAAACTTAGTAATAAGAAATGAGAAAGACCAGAGTGCCCAAAACTACTTGTGGCAAAGCTTTGACTATCCTTCTGATACTCTTTTACCAGGAATGAAGTTAGGTTGGGATGTGAAAACTGGTCTTAATCGACGTTTCACTGCATGGAAGAGTTGGGATGACCCCTCACTTGGAGATTTCACAGCAGAGCTTGTAGTTCACAATTATCCTGAAATAGTTTATTGGTGGGGTCAAAAAGAGTATTTTAGAATTGGCCCTTGGAATGGTCTTGGATTTAGTGGTGCCCCTAGAACGAAGAAAAATTGGATTGATGATTTGAAGTTTGTCTCTAACAAGGATGAGGTGTATTTCACATATGCTCCTAGAAATGATTCACTGATTTTAAGGCGGGTCTTGAACCAGACGACATATTCAGTTGAGACCTATATATGGATTGAAAATGAAAAAAGTTGGAGCACTTTCGTTTATCTGCCAATGGATAGCTGTGATAGATATAATCGTTGTGGTCCATACGGAAATTGCATCATTGATGAGACGCCAGTCTGTCAGTGCTTGAAAGGGTTCAAGCCAAAATCACCAAGAAATTGGGAAGTAATGGATTGGACCCAAGGATGTATTCGTAGTGAATCATGGAGTTGTAAGGTTAAAAAAAGAGACAATTTTCTCAAATTTAGTGGGTTGAAATTGCCAGACACAACACATTCTTGGGTTAACGCAAGTATGACACTTGAAGAGTGCAAAGCCAAATTGGAAAATTGTTCTTGTACAGCTTATGCTAATTCCGATATCAGCGGAGGAGGTAGTGGGTGTGCCATCTGGTTTGGAGATCTAATTGACATGAAACGTATTTCGGATCCTGATCAAGTTATTTATATTCGCCTTGCTGCTCCAGAAACAGCTGAACAGGAAGATGTAGACAGAAACAAGATCATGGTGATTGTTATGACAAGTACTATTTTAATGGCTGTGGTGTTTTCTTTTGCTTCCTTCTATATTTACAACAGCAGAACCAAGTTTAAAGGAAATCATGTTGATGGCCCTGAAGGAGACATAGAGCTTCCTTTCTTTGACTTTGCTGTAATAGTTAGTGTTACTAATAACTTCTCCATTGACAACAAGCTTGGCCAAGGTGGTTTTGGACCTGTGTACAAGGGTATCTTGCCTAATGGGCAAGAGATTGCTGTCAAGCGACTTTCACAGAGTTCTAATCAAGGAATTAAAGAATTTCAGAATGAAGTATTGTGTGCCAAACTTCAACACCGAAATCTCGTTAAGGTTCTTGGTTGCATCCAAGGAGGAGAGAAAATGCTCATATATGAATACATGCCCAATAAGAGCTTAGATTCATTAATTTTTGGTTCTATTACTCAAAGTAAACTATTAGATTGGTCCAAGCGCTTTCATATTATATGTGGAATTGCTCGTGGGCCTATGTATCTTCATCAAGATTCCAGATTGAAGATTATTCATTGGGATATTAAAGCTAGTAATATATTATTAGACAATGAATTGAATCCAAAAATATCGGATTTTGGCTTAGCAAGAATCTTTGGAGGAGATCAAGTTGAAGAGAATACAAATAGAGTGATTGGAACATATGGTTATATGGCACCCGAATATGCTATTGATGGTTTATTCTCTACCAAATCTGACGTATTTAGTTTTGGAATATTACTATTGGAAATAGTGAGTGGAATGAAAAATAGAGGGCTCTCCCACCCAAACCAGAGTCTTAATCTCATTGGACATGCATGGTGGTTGTGGAAAGATGGCATCCCACTAAAGTTGATTGATGCAAATTTGAGGGAATTTTGTATTGCATCAGAAGTATTGCGATGCATCCATATTGGCCTTCTTTGTGTACAACATCATCCTGGAGATAGGCCAGATATGGCTTCTGTGGTTGTGATGTTGAGTAGTGAAGTCACCTTGCCTCAACCTAAAGAACCTGAATTCCTTTTAAACAAGACTTCAATTATGGGAGAAAGTTCAACTATTTTACAAGTTCGCTGCCTGACATGTCTAAACTATGATTTTTCAAGGATCAAACGTGCGACCAAGTCACCAATCATCGTGCTTCTTCTTCCGACTTTGCTTGATCATGCGTGCAGCTCCAACATAATATTATTTCTAATAATGGCAATCCTTCATTATTGTTTGCTACTTCTATTTTTCAGTAAGCTTTTATTCTTCTCGCCATCATTATTGGCCACGGCAACCACCGATACTATTACGCAGTCTCAGCCTCTGGTTGATGATGGAAAATCCACCTTGGTATCTAAAGATGGAAGATTTGAACTGGGATTTTTCAGCCCAGGTAGTTCCACAAACCGCTACGTTGGACTCTGGTACAAGAATGTTCCAGTTAGATATATCCTTTGGGTTGCCAACCGCGAAAAACCAGCCAAAGACAGGCTTGGCATGATGAGCATAAACAAAGAGGGACATCTTGTTGTTCTCAGCCAAAATGAGACTCTTCTTTGGGTTGCAAACTCGACGACGACAACAAAGGCGTTGATGAGTCCTATTGTTCAGCTTTTAGACTCTGGAAACTTGGTACTAAGAGACGACAAAGACCAGAATCCACAAAACTACTTGTGGCAAAGCTTCGACCATTACTCTAACGTATTTTTACCAGGAATGAAGCTTGGATGGGACTTGAGAACGGGTCTGAACCGGCGTTTAGTAGCATGGAAGAATTGGGATGACCCTTCTCCAGGAGATTTCACATGTGAGCTCATGCTTCACAGTTATCCAGAAATATATACTTGGCAAGGTCGGACAAAATATTACAGGAGTGGCCCTTGGAATGGTGATCATTTTGTTGATACTCCTTCATCAAATAAGATGTTGCTTTATAATGCAACGCTTGTGTCTAACAAGGATGAGGTGTACTACATGTATGTTCCCTTAAATGAGTCAATGGTCTCTATCAGAGTCTTGAACCAGACAAGAAACTCTCTGCAAAATCTCATGTGGGTTGAAGAGGATCAAACTTGGAAGTCTTTTGGCGATGTTCCAAGAGACAATTGTGGAAGATATAATCTTTGTGGTGCTTTTGGAATTTGTGCCATTGTTGACTCAACCTTATGCCAATGCTTGAAAGGATTTGAGCCAAAATCACCTAAGAATTGGGACATGTATGACTGGACAGGAGGGTGTGTTCGCAGTAAACCTTGGAGTTGTAAAGTTAAAGGCAAAGACAATTTTGTTAAATATAGTAACCTTAAATTACCAGATACTACATATACTTGGGTCAATGCAAGTATGACACTTGACGAGTGCAAAGCCAAATGTTGGGAAAATTGTTCTTGCACTGCTTATTCTTTTTCAGATATTAGCGGAGGAGGAAGTGGCTGTGTCATGTGGTTTGGTGATCTACTTGATTTGAATCAAATGTCAAATGATGCTGGCCAAGATCTATATATTCGCCTTGCTTCTACAGATATAGCCAAACATGAAGGTTCTAATTCATACAAGATTAAAGTAGCTGCGATAACGGCTACTGTTTTTGCACTTTGGATGCTTTTGACCTCCCTCTATATTTATAAGAGCAGAAGAAAATCCAAAGAAAATACTGATGAAGTCCCAGAAGGAGATATGGACCTTCCTCTCTATGACTTTGCTATAATAGCTAGTGCTACCCAGAACTTCTCAGATGAAAATAAGCTTGGCCAAGGTGGTTTTGGACCCGTATATAAGGGAACATTAGGTGGTGGACAAGAGATTGCTGTGAAGCGACTTTCACAAAATTCTCACCAGGGAATGAGGGAATTCAAGAATGAAGTTATGTTGTGTGCCAAACTTCAGCATCGAAATCTTGCTAAAGTTCTTGGTTGCTGCATTGGAGGAGAGGAGAAAATGCTCATTTACGAATACATGTCAAATAAGAGTTTAGATTCATTTATTTTTGGTTCGAAACTCTTATGTTGGTTCAAGCGCTTCAACATTCTATGTGGAATTGCCCGAGGACTTACATATCTTCATCAAGATTCAAGATTAAGAATCATTCACAGAGATCTCAAAGCAAGTAATATATTACTAGACAATGATTTGAATCCGAAAATATCAGATTTTGGCTTGGCAAAAACATTTGGAAAAGATGAAAATGTAGAAAATACAAGGAGAGTTATCGGTACATATGGTTATATGGCACCTGAATATGCAATTTATGGGTCATTCTCCATGAAATCTGACGTCTTCAGCTTTGGAATTTTATTGCTTGAGATAGTGAGTGGAAAGAAAAATGGAGCATTCTCCTTGGCAAACAAGAATGTCAACCTTATTGGGCTTGCATGGAGGTTGTGGAAGGAGGGAATCCCACTTGAATTGATTGATCCACATATGGAAGAACCTTATAATGTATCAGAAGTATTGAGATGCATCCATATCGGTCTTCTTTGTGTGCAAAATCATCCTGATGATAGACCAAACATGGCGTCTGTGGTTGTAATGTTAAGCAGTGAGGGAGATTTGCCTCAACCTAAAGAACCTGGTTTCCTCTTAGAAACATTTCCATACAAAAAACATGTGTTCCAATTCCTCATTTCCTCCTCCTTCAGCGTCCAAGCTGAGATCTCCACGGTTGCGCCTTCATCATCGCTCACAGACTCACAGTGTCAGAGGTCGCTCATTCACCATCGCTCACCGTCGCTCATCATCGAGTCACTGTTGCTCACCGTCGCTCACCCTCACTGGTTCACCGTTGCTCCTCATCGAGTCACTGTTGCTCACTCTTTTGAATCTGAGCTTTTAGCCTCTTGCTCGGTGCCACCGTTGATCAATCGCAGGCTCGCGGGTCGCAGGTTCCGCCGTCACTTCACTCGCTTGCTCCGTCGATCACTCTCTGTAAGCAACCAGCAGGACCAGGTAAGTAACTTTGTTCTCCATCCGTTCGTCATCCCCGATCCCACCTGCTTGACTGCTTTGATGCTTGCCCTATTACTGTCTGCCCGTCTCCAAGCCCCAATCCCCTTTATCGTGCTGCTTCTTTGTTCCTTGACTTTACATTTAAACCAGTAG 5409 0.4038 MAILPSMLVLANMLLSISVLVSATDIITRSQPLPDDGTTTLTSKDGIFELGFFSPGSSTNRYVGIWFKRIRRRTIVWVANREKPIRDNSGMLSLNTQGNLVLLSQNENIIWLANSTRKALSPIVQLLDSGNLVIRNEKDQSAQNYLWQSFDYPSDTLLPGMKLGWDVKTGLNRRFTAWKSWDDPSLGDFTAELVVHNYPEIVYWWGQKEYFRIGPWNGLGFSGAPRTKKNWIDDLKFVSNKDEVYFTYAPRNDSLILRRVLNQTTYSVETYIWIENEKSWSTFVYLPMDSCDRYNRCGPYGNCIIDETPVCQCLKGFKPKSPRNWEVMDWTQGCIRSESWSCKVKKRDNFLKFSGLKLPDTTHSWVNASMTLEECKAKCXENCSCTAYANSDISGGGSGCAIWFGDLIDMKRISDPDQVIYIRLAAPETAEQEDVDRNKIMVIVMTSTILMAVVFSFASFYIYNSRTKFKGNHVDGPEGDIELPFFDFAVIVSVTNNFSIDNKLGQGGFGPVYKGILPNGQEIAVKRLSQSSNQGIKEFQNEVXLCAKLQHRNLVKVLGCIQGGEKMLIYEYMPNKSLDSLIFGSITQSKLLDWSKRFHIICGIARGPMYLHQDSRLKIIHWDIKASNILLDNELNPKISDFGLARIFGGDQVEENTNRVIGTYGYMAPEYAIDGLFSTKSDVFSFGILLLEIVSGMKNRGLSHPNQSLNLIGHAWWLWKDGIPLKLIDANLREFCIASEVLRCIHIGLLCVQHHPGDRPDMASVVVMLSSEVTLPQPKEPEFLLNKTSIMGESSTILQVRCLTCLNYDFSRIKRATKSPIIVLLLPTLLDHACSSNIILFLIMAILHYCLLLLFFSKLLFFSPSLLATATTDTITQSQPLVDDGKSTLVSKDGRFELGFFSPGSSTNRYVGLWYKNVPVRYILWVANREKPAKDRLGMMSINKEGHLVVLSQNETLLWVANSTTTTKALMSPIVQLLDSGNLVLRDDKDQNPQNYLWQSFDHYSNVFLPGMKLGWDLRTGLNRRLVAWKNWDDPSPGDFTCELMLHSYPEIYTWQGRTKYYRSGPWNGDHFVDTPSSNKMLLYNATLVSNKDEVYYMYVPLNESMVSIRVLNQTRNSLQNLMWVEEDQTWKSFGDVPRDNCGRYNLCGAFGICAIVDSTLCQCLKGFEPKSPKNWDMYDWTGGCVRSKPWSCKVKGKDNFVKYSNLKLPDTTYTWVNASMTLDECKAKCWENCSCTAYSFSDISGGGSGCVMWFGDLLDLNQMSNDAGQDLYIRLASTDIAKHEGSNSYKIKVAAITATVFALWMLLTSLYIYKSRRKSKENTDEVPEGDMDLPLYDFAIIASATQNFSDENKLGQGGFGPVYKGTLGGGQEIAVKRLSQNSHQGMREFKNEVMLCAKLQHRNLAKVLGCCIGGEEKMLIYEYMSNKSLDSFIFGSKLLCWFKRFNILCGIARGLTYLHQDSRLRIIHRDLKASNILLDNDLNPKISDFGLAKTFGKDENVENTRRVIGTYGYMAPEYAIYGSFSMKSDVFSFGILLLEIVSGKKNGAFSLANKNVNLIGLAWRLWKEGIPLELIDPHMEEPYNVSEVLRCIHIGLLCVQNHPDDRPNMASVVVMLSSEGDLPQPKEPGFLLETFPYKKHVFQFLISSSFSVQAEISTVAPSSSLTDSQCQRSLIHHRSPSLIIESLLLTVAHPHWFTVAPHRVTVAHSFESELLASCSVPPLINRRLAGRRFRRHFTRLLRRSLSVSNQQDQVSNFVLHPFVIPDPTCLTALMLALLLSARLQAPIPFIVLLLCSLTLHLNQ 1804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1330g00001 1804 Pfam D-mannose binding lectin 74 179 IPR001480 -
Pral1330g00001 1804 Pfam D-mannose binding lectin 923 1030 IPR001480 -
Pral1330g00001 1804 CDD PAN_AP_plant 1192 1277 - -
Pral1330g00001 1804 CDD STKc_IRAK 1355 1617 - -
Pral1330g00001 1804 CDD B_lectin 885 1003 IPR001480 -
Pral1330g00001 1804 Gene3D Transferase(Phosphotransferase) domain 1 573 780 - -
Pral1330g00001 1804 Gene3D Transferase(Phosphotransferase) domain 1 1425 1624 - -
Pral1330g00001 1804 ProSiteProfiles EGF-like domain profile. 287 323 IPR000742 -
Pral1330g00001 1804 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 868 1001 - -
Pral1330g00001 1804 Pfam PAN-like domain 1193 1261 IPR003609 -
Pral1330g00001 1804 Pfam PAN-like domain 342 410 IPR003609 -
Pral1330g00001 1804 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1314 1424 - -
Pral1330g00001 1804 CDD B_lectin 40 153 IPR001480 -
Pral1330g00001 1804 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 464 572 - -
Pral1330g00001 1804 SUPERFAMILY alpha-D-mannose-specific plant lectins 923 1035 IPR036426 -
Pral1330g00001 1804 ProSiteProfiles PAN/Apple domain profile. 1193 1277 IPR003609 -
Pral1330g00001 1804 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1467 1479 IPR008271 GO:0004672|GO:0006468
Pral1330g00001 1804 Gene3D Phosphorylase Kinase; domain 1 1310 1424 - -
Pral1330g00001 1804 Gene3D Phosphorylase Kinase; domain 1 470 572 - -
Pral1330g00001 1804 FunFam Os04g0303100 protein 65 210 - -
Pral1330g00001 1804 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 341 424 - -
Pral1330g00001 1804 ProSiteProfiles Protein kinase domain profile. 1349 1631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1330g00001 1804 ProSiteProfiles Bulb-type lectin domain profile. 872 998 IPR001480 -
Pral1330g00001 1804 SMART serkin_6 498 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1330g00001 1804 SMART serkin_6 1349 1617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1330g00001 1804 SUPERFAMILY alpha-D-mannose-specific plant lectins 75 184 IPR036426 -
Pral1330g00001 1804 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 13 760 - -
Pral1330g00001 1804 CDD PAN_AP_plant 341 425 - -
Pral1330g00001 1804 Gene3D - 18 150 IPR036426 -
Pral1330g00001 1804 Gene3D - 867 1002 IPR036426 -
Pral1330g00001 1804 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1425 1625 - -
Pral1330g00001 1804 ProSiteProfiles Bulb-type lectin domain profile. 24 147 IPR001480 -
Pral1330g00001 1804 ProSiteProfiles PAN/Apple domain profile. 342 426 IPR003609 -
Pral1330g00001 1804 SMART ntp_6 345 424 IPR003609 -
Pral1330g00001 1804 SMART ntp_6 1196 1276 IPR003609 -
Pral1330g00001 1804 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 19 150 - -
Pral1330g00001 1804 SUPERFAMILY Protein kinase-like (PK-like) 481 778 IPR011009 -
Pral1330g00001 1804 FunFam Os04g0303100 protein 913 1061 - -
Pral1330g00001 1804 Gene3D Hepatocyte Growth Factor 341 426 - -
Pral1330g00001 1804 Gene3D Hepatocyte Growth Factor 1192 1279 - -
Pral1330g00001 1804 Pfam Protein tyrosine and serine/threonine kinase 499 712 IPR001245 GO:0004672|GO:0006468
Pral1330g00001 1804 Pfam Protein tyrosine and serine/threonine kinase 1352 1615 IPR001245 GO:0004672|GO:0006468
Pral1330g00001 1804 ProSitePatterns Serine/Threonine protein kinases active-site signature. 619 631 IPR008271 GO:0004672|GO:0006468
Pral1330g00001 1804 Pfam S-locus glycoprotein domain 211 321 IPR000858 GO:0048544
Pral1330g00001 1804 Pfam S-locus glycoprotein domain 1062 1172 IPR000858 GO:0048544
Pral1330g00001 1804 SUPERFAMILY Protein kinase-like (PK-like) 1332 1625 IPR011009 -
Pral1330g00001 1804 CDD STKc_IRAK 504 769 - -
Pral1330g00001 1804 SMART blect_4 32 153 IPR001480 -
Pral1330g00001 1804 SMART blect_4 872 1004 IPR001480 -
Pral1330g00001 1804 ProSiteProfiles Protein kinase domain profile. 498 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1330g00001 1804 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 573 777 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1330g00001 Pral-Chr1330 299 22618 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1330g00001 438 783 Receptor kinase-like Gene Family AT4G23230 54.131 4.42e-118 386
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral1330g00001 PK_Tyr_Ser-Thr 1.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1330g00001 - - jre:109013535 1846.25