Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral132g00008 ATGAGTTACCTTAGCTTACCAAGCAGCTCGTCTTTCCGGAGGACCTGGAAATACGAAGTGTTTCTGAGTTTCAGAGGTGAGGATACTCGCAACAGTTTCACGGGTCATCTTTATGCTGCTCTCCAACGAAAAGGTATATACACTTACAAGGATGATAAAAGGCTCCAGAGAGGAGAACGTATTGGACCAGAGCTCCTCAAAGCAATCGAACAATCCCAGATTTCAATCGTTGTCTTATCGAAAAACTATGCTGATTCCACATGGTGTTTGGACGAACTGGCCAAGATTTGCGAGGGAATTGCTCAACCGGGATACACTGTTCTGCCAATCTTCTACCATGTTGATCCATCTGATGTACGAAAGCAGAGGGGCGATTTCAAACATGCATTTGATAAACATGAGCAAAACTCAAGTAATAAGGTCCCAAGATGGAAGTTAGCTTTGAAACAAGTAGCCGATCTCGCTGGTTATGATGTAAGGAATAAATCTGAGTCAGATACTATTGATGAAATCGTTAAGGATGTCACCCATAGATTGAAGCATAGATTCTCAAGTCTGGCTGATGATCTAGTGGGGATGAAATCTCGTGCAGAAGCTTTTGAAAAGCTTCTAAACCTAGATTCATGGGATGATGTTCAATTTGTGGGGATTTTGGGAATGCCCGGAGTAGGGAAGACTACTCTTGCTGCAGTTGTATATGATAGAATCTCCCACTACTTTGATGCTTGCTGTCTTCTTCTTGATGTCAGTAAAGTTTACAAGGGTCCTGGTCTTGCCGGTTTACAAGAACAACTTCTCTCTGAAACAGTGGGGAATGATCAAAAGGTTTGGGAGGAACACACAGGAACCAATTTAATAAGCAATAGGTTTCGCCAAGCTAAAACTCTTGTTGTTGTTGATAATGTTGATCATGCAGATCAATTGGAGAAATTGGTTGGAAAGCCTGAGTGGTTTGGTGCTGGGAGTAGAATCATCATAACAACTAGACATAAGAGAATCCTAAAGATGCATGGAGTGAGTAGAGATAAAGTTTACAAGGTTGAACTACTGAATGATGAAGAAGCTCTGCAACTTTTTTGTGTAAAGGCCTTCAAAAGTGATGTTCCTGATGATGGATTTGAAGAGCTGACCCATAGTTTTCTGCAATACGCTAAAGCCCTTCCACTAGCAATCAAAGTGTTAGGTTCTTCTTTGCTTATGCGAAAAAAATCAGAGTGGGAAGCACTATTAGATAGATTGAAAGAAATTCCCAACCAAGAGGTTATGGGAGTGCTGGAAACGAGTTTATTTTCACTTGACCAAAGGGACAAGGATATATTTGTAGATATTGCTTGTTTCTTCAAGGGAGAAGATGAGGAGTATGCTAGAAAAATTCTTGATCATTGTGGATTTAATCCTGAGGTTGGAATCAGCATTCTGCGTGAAAGATGA 1431 0.4081 MSYLSLPSSSSFRRTWKYEVFLSFRGEDTRNSFTGHLYAALQRKGIYTYKDDKRLQRGERIGPELLKAIEQSQISIVVLSKNYADSTWCLDELAKICEGIAQPGYTVLPIFYHVDPSDVRKQRGDFKHAFDKHEQNSSNKVPRWKLALKQVADLAGYDVRNKSESDTIDEIVKDVTHRLKHRFSSLADDLVGMKSRAEAFEKLLNLDSWDDVQFVGILGMPGVGKTTLAAVVYDRISHYFDACCLLLDVSKVYKGPGLAGLQEQLLSETVGNDQKVWEEHTGTNLISNRFRQAKTLVVVDNVDHADQLEKLVGKPEWFGAGSRIIITTRHKRILKMHGVSRDKVYKVELLNDEEALQLFCVKAFKSDVPDDGFEELTHSFLQYAKALPLAIKVLGSSLLMRKKSEWEALLDRLKEIPNQEVMGVLETSLFSLDQRDKDIFVDIACFFKGEDEEYARKILDHCGFNPEVGISILRER 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral132g00008 476 FunFam Disease resistance protein (TIR-NBS-LRR class) 14 181 - -
Pral132g00008 476 Pfam NB-ARC domain 206 415 IPR002182 GO:0043531
Pral132g00008 476 ProSiteProfiles TIR domain profile. 16 179 IPR000157 GO:0007165
Pral132g00008 476 SMART till_3 17 154 IPR000157 GO:0007165
Pral132g00008 476 Gene3D - 180 345 IPR027417 -
Pral132g00008 476 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 18 475 IPR044974 GO:0006952
Pral132g00008 476 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 157 IPR035897 -
Pral132g00008 476 Gene3D - 349 433 IPR042197 -
Pral132g00008 476 PRINTS Disease resistance protein signature 214 229 - -
Pral132g00008 476 PRINTS Disease resistance protein signature 384 398 - -
Pral132g00008 476 PRINTS Disease resistance protein signature 289 303 - -
Pral132g00008 476 Pfam TIR domain 17 190 IPR000157 GO:0007165
Pral132g00008 476 Gene3D - 10 179 IPR035897 -
Pral132g00008 476 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 177 443 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral132g00008 Pral-Chr132 149027 151876 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral132g00008 191 476 WRKY Transcription Factor Family AT5G45050 37.500 1.16e-53 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral132g00008 - - pcin:129315185 764.222