Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral132g00006 ATGGCGGACGGGAGGCCGACCAATATTTATCTAAGCCACAGAGACGATGACTACAACGTTTATGAATTCACTGATAAGCTTTGTGCTGCTTTTGAAGCTGAAGGTTTAACAACCTTTGAGCAATATCAGGATCTTGAAATAGACGATTCACTTCTAGATGATCTTCTGAAACCAATTCATGAATCGTGGGTCTATATTTTTATCTTCTCCAAAAACGATGCTACTTCAAAAGGTCACTTAATGGAACTCCAAGAAATTACTTGGCGCATTCATCGGCCACGCGGTGTTATATTCATCTTCTACGATCTTGATCTAATCCAGGAAAAGCAGGTTCTGGATGAATTCTATGACAAGGTCGCCAGTCAGTTCAGCAAATTCACAAGTGGGACGCCAGATGATCTTCTTGAGATGTACAGTATCATGATCCAACCACGCCGAATTTCAAAAGCCATCAATGAAATCGTTAGCAAGGTCATGATAGCTCTGCGTCAACTAGAGTATGTTGTTGAGCTAGTTGGGATGCAATCTCGTGTAGCTGAAGTTGAAAAGCTTTTGAATTTAAGTTCAGTTGATGAACAACTTCGCGTAGTAGGCATTTGCGGTATGGGCGGAATAGGCAAGTCAACTCTTGCTCAAGTTTTGTATAGATCAATCTCTCGCCATTTTGACGCTTATTGTTTCATAGAGAATATAAGTGAACTTTTGCATGATGATCTTCCCCTAATGGAAATTCTTTATCAAAACTTTGAGATTAAAGATCCAGAAACTTGGACTCGAAACCAACGGAGATTTCTCGTTGTTCTTGATGGTGTTGATCATGAACAAAATCTTGATGCACTGAATCTGCTTCTGAAATCTGAACGCTTTGATAAAGGAAGTAGAATCATCATTACAACTAGAAATGAACGAGTCCTTGAGAAGTGTGAAGTGGAACATGTTTATAGACCTAAAATACTGAGTGAGGATGAAGCTCTTAAATTCTTCTGTATAAAAGCCTTTGGACGATATTCTGCAGAGAGTGGATATGAAGAGATGACAAAGAGTGTACTGGAATATGCAAATGGACTTCCATTGGCAATTATAAAACTGGGCACATTCTTACGCCAGAAAAGTGTTGGAGAATGGAGAAGTGCCTTGGCTCAACTAAAAAGGGTTCCTGATCGTGACATAGTGGAGGTGCTCAAAAGAAGTTTTGATGAACTTGATGATAAGAGCAAGGAAATCTTTTTGGACATCTCATGTTTTTTCATTGGAAAAAAGATGGATCGTGTGAAGGAAATTTTAGATACTTGTGGCTTTCCTGCGGAGAATGGAATGAAAATTTTGATTGAGAAATCACTCATGAACATTTTAGATCACAAAATAGAGATGCATAATATGTTGCAAGAAATGGGACAACATATTGTTCGGAGAGGATTCCCTTATGAGCCCAAAAAATGGAATAGGTTGTGGCATATAGACGATATTGATTACGTCATGCAACAAAATGAAGGCACAGCTATGAAAAGATTTGAAGCTATATCCCTGGATTTGGAAGACACCAGAAGAGTTACATTAAGAGTTGAAGCTTTATCACAAATGAGCAATCTTAGATTACTCATATTCCGTAATGTCAACTTTTATGGAACTCTCAATTCTCTTTCTAATGAACTACGATATGTTTCGTGGCATCAATATCCTTTCACTAGTTTGCCATCGACTTTCGAGCCTTATGCACTAGTGGAATTGATCATGACCGATAGCAACATCAAAGAATTATGGCAAGGCCAAAAGGTGCTTCCTAAGTTGAAAACTATGATTCTTAGTGGCTCCAAAAATTTGATGAAGATGCCAGATTTTGGAGGGGTTCCAAATCTTGAAAGATTAGAGCTGGAAGGATGTACTGGATTGTTGCAATTACATGCATCTATTGCTAGAATTCCAAAGCTCAAATTCTTAAATCTGAGAAACTGCATTAATTTGGTTAGTATTCCGAATGTGTTATTTGGTCAAGGCTGTTTGGAAATTCTGAACCTTGCTGGCTGTTCAAAGTTTGCTTCTTGTTTGAGATTTTGCCCTTTGAAGAGCTCCATAGAAGTGAGACTACTCAGCATTTGGTACCATCAATTCTTAGAAAGAATGTTGTACTTTTTTCTTTTTGTTTTGCCCCAACATAAAAATTATCATCTGCTTGTTTTTTGCTGTCTTTTTTACTTGTTCTGTAGGGTAAAAATAAAAGGTGTGTCCTGA 2229 0.3791 MADGRPTNIYLSHRDDDYNVYEFTDKLCAAFEAEGLTTFEQYQDLEIDDSLLDDLLKPIHESWVYIFIFSKNDATSKGHLMELQEITWRIHRPRGVIFIFYDLDLIQEKQVLDEFYDKVASQFSKFTSGTPDDLLEMYSIMIQPRRISKAINEIVSKVMIALRQLEYVVELVGMQSRVAEVEKLLNLSSVDEQLRVVGICGMGGIGKSTLAQVLYRSISRHFDAYCFIENISELLHDDLPLMEILYQNFEIKDPETWTRNQRRFLVVLDGVDHEQNLDALNLLLKSERFDKGSRIIITTRNERVLEKCEVEHVYRPKILSEDEALKFFCIKAFGRYSAESGYEEMTKSVLEYANGLPLAIIKLGTFLRQKSVGEWRSALAQLKRVPDRDIVEVLKRSFDELDDKSKEIFLDISCFFIGKKMDRVKEILDTCGFPAENGMKILIEKSLMNILDHKIEMHNMLQEMGQHIVRRGFPYEPKKWNRLWHIDDIDYVMQQNEGTAMKRFEAISLDLEDTRRVTLRVEALSQMSNLRLLIFRNVNFYGTLNSLSNELRYVSWHQYPFTSLPSTFEPYALVELIMTDSNIKELWQGQKVLPKLKTMILSGSKNLMKMPDFGGVPNLERLELEGCTGLLQLHASIARIPKLKFLNLRNCINLVSIPNVLFGQGCLEILNLAGCSKFASCLRFCPLKSSIEVRLLSIWYHQFLERMLYFFLFVLPQHKNYHLLVFCCLFYLFCRVKIKGVS 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral132g00006 742 SUPERFAMILY L domain-like 507 705 - -
Pral132g00006 742 ProSiteProfiles TIR domain profile. 5 134 IPR000157 GO:0007165
Pral132g00006 742 SMART till_3 6 157 IPR000157 GO:0007165
Pral132g00006 742 Pfam NB-ARC domain 183 385 IPR002182 GO:0043531
Pral132g00006 742 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 164 412 IPR027417 -
Pral132g00006 742 Gene3D Ribonuclease Inhibitor 498 693 IPR032675 -
Pral132g00006 742 Gene3D - 1 130 IPR035897 -
Pral132g00006 742 Gene3D - 152 313 IPR027417 -
Pral132g00006 742 Gene3D - 318 402 IPR042197 -
Pral132g00006 742 PRINTS Disease resistance protein signature 258 272 - -
Pral132g00006 742 PRINTS Disease resistance protein signature 353 367 - -
Pral132g00006 742 PRINTS Disease resistance protein signature 591 607 - -
Pral132g00006 742 PRINTS Disease resistance protein signature 196 211 - -
Pral132g00006 742 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 10 680 IPR044974 GO:0006952
Pral132g00006 742 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 107 IPR035897 -
Pral132g00006 742 Pfam TIR domain 9 115 IPR000157 GO:0007165
Pral132g00006 742 SUPERFAMILY "Winged helix" DNA-binding domain 389 491 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral132g00006 Pral-Chr132 106254 110137 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral132g00006 169 674 WRKY Transcription Factor Family AT5G45050 34.944 3.21e-79 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral132g00006 - - pcin:129300842 629.787