Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral132g00003 ATGAATTACCTTAGCCTACCAAGCAGCTCGTCTTCTCGGAGGACCTGGAAATACGAAGTGTTTCTGAGTTTCAGAGGTGAGGATACTCGCAACAGTTTCACCGATCATCTTCATGCTGCTCTTCAACGAAAAGGTATATACACTTTCAAGGATGATAAAAGGCTCCAGAGAGGAGAAAGTATTCGGCCAGAGCTACTGAAAGCGATTGAACAATCCCGGATTTCACTTGTCGTCTTATCCAAAAGCTTCGCAGATTCCACATGGTGCTTGGACGAACTGGCCAAGATTTGCGAGGGAATTGGTCAACCGGGATACACTGTTCTACCAATTTTCTACCATGTTGATCCATCTGACGTACGAAAGCAGAGGGGCGATTTCAAACAACCGTTTGATAAACATGAGCGAGGCTCAAGTGATAAGGTCCCAGGATGGAAGTCAGCTTTGGAACAGGTAGGCCAGCTCGCCGGTTATGATGTAAGGAATAAATCAGAGTCGGGTATTATTGATGAAATCGTTATGGATGTGATCCATAAACTGAAGCATAAATTCTCAAGTCTGGCTGATGATCTAGTGGGGATGCAATCTCGTGCAGAAGCTTTTGAAAAGCTTCTAAATCTAGATTCATCCGATGATATTCTATTTGTGGGGATTTGGGGAATGCCCGGAGCAGGGAAGACCACTCTTGCTGCAGTTGTATATGATAGAATCTCCCACCACTTCGATGCTTCCTGTCTTCTTCTTGATGTCAGTAAAGCTCGCAAGCCTTCTGGTCTTGTCCGTTTACAACAACAACTTCTTTGTGAAACAGTGGGGAAAGATCAAGAGGTTTGGGAGGAACACACAGGAACCAATTTAATAAGCACTAGGCTTCGCGAAACTAAAACTCTTATTGTTGTTGATGGTGTTGACCATTTCGATCAGTTGAAGAAATTGGTTGGAAAGCACGAGTGGTTTGGTCCTGGGAGTAGAATCATCATAACAACTAGAGATGATAAAATCCTTGAGAGGCGTGGGGTGGGTAAAGATAAAGTTTACAAGGTTGAACTTTTGAATGATGAAGAAGCTCTTCAACTTTTTTGTGTTAGAGCCTTCAAAAATGATGTTCCTGATGATGGATTTGAAGAGTTGACCCATAGTTTTCTACAATATGCTAAAGCCCTTCCACTGGCAATCCAAGTGTTAGGTTCCTCTTTGCGTACCCGGAAACAATCAGAGTGGAAAGCACTATTAGATAGATTGAAAGAAATTCCCGACAGAGAGATTATGAAAGTGCTGGAAACGAGTGTACATTCACTAGACCAAAGGGACGAGGATATATTTGTAGATGTTGCTTGTTTCTTCAAGGGTGAAGATGAGAAATATGCCAAAAAAATTCTAGATCATTGTGGATTTAATCCCGAGCTTGGAATCAACATTCTGTGTGAAAGATCACTCTTGGTCATCGTCAATGGAACACTCCGGATGCATGATTTGCTGCAAGAAGTGGGCTGGAAAATTGCGAAAGGAGATTTCCCTCAAGAGCCAGCAAAGTGGAGCAGACTCTGGTTGTACAGAGATCTTCAAGCTGTTAGGACAGGAACAGATGAAGTTAAAGCCATCGTCTTGAAGGAGGAAGATGTAGATGTGAATGAGATGCTGCCATTGAGGGCTGAAGTTTTATCCCAAATGAATTGCCTAAGGCTAATCATATTCCCTTCTATGAAATTTTCAGGAAAGCTGAATAATCTTTCCAATGACTTGAGGTTTCTTTCCTGGCAGAAATTTCCTTTCAGTACTTTACCACCAAGTTTTGAACCAGCTAAACTTGTTGAATTGGTCCTGATTGATAGCAATATAAGACTTCTATGGGAAGGTGTAAAGGTGTAG 1866 0.4212 MNYLSLPSSSSSRRTWKYEVFLSFRGEDTRNSFTDHLHAALQRKGIYTFKDDKRLQRGESIRPELLKAIEQSRISLVVLSKSFADSTWCLDELAKICEGIGQPGYTVLPIFYHVDPSDVRKQRGDFKQPFDKHERGSSDKVPGWKSALEQVGQLAGYDVRNKSESGIIDEIVMDVIHKLKHKFSSLADDLVGMQSRAEAFEKLLNLDSSDDILFVGIWGMPGAGKTTLAAVVYDRISHHFDASCLLLDVSKARKPSGLVRLQQQLLCETVGKDQEVWEEHTGTNLISTRLRETKTLIVVDGVDHFDQLKKLVGKHEWFGPGSRIIITTRDDKILERRGVGKDKVYKVELLNDEEALQLFCVRAFKNDVPDDGFEELTHSFLQYAKALPLAIQVLGSSLRTRKQSEWKALLDRLKEIPDREIMKVLETSVHSLDQRDEDIFVDVACFFKGEDEKYAKKILDHCGFNPELGINILCERSLLVIVNGTLRMHDLLQEVGWKIAKGDFPQEPAKWSRLWLYRDLQAVRTGTDEVKAIVLKEEDVDVNEMLPLRAEVLSQMNCLRLIIFPSMKFSGKLNNLSNDLRFLSWQKFPFSTLPPSFEPAKLVELVLIDSNIRLLWEGVKV 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral132g00003 621 FunFam Disease resistance protein (TIR-NBS-LRR class) 14 181 - -
Pral132g00003 621 Gene3D - 11 180 IPR035897 -
Pral132g00003 621 Pfam TIR domain 17 191 IPR000157 GO:0007165
Pral132g00003 621 PRINTS Disease resistance protein signature 289 303 - -
Pral132g00003 621 PRINTS Disease resistance protein signature 214 229 - -
Pral132g00003 621 PRINTS Disease resistance protein signature 384 398 - -
Pral132g00003 621 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 157 IPR035897 -
Pral132g00003 621 SMART till_3 17 154 IPR000157 GO:0007165
Pral132g00003 621 SUPERFAMILY "Winged helix" DNA-binding domain 420 520 IPR036390 -
Pral132g00003 621 Gene3D - 181 339 IPR027417 -
Pral132g00003 621 Pfam NB-ARC domain 201 419 IPR002182 GO:0043531
Pral132g00003 621 Gene3D - 349 433 IPR042197 -
Pral132g00003 621 ProSiteProfiles TIR domain profile. 16 179 IPR000157 GO:0007165
Pral132g00003 621 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 181 442 IPR027417 -
Pral132g00003 621 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 18 614 IPR044974 GO:0006952
Pral132g00003 621 FunFam Disease resistance protein (TIR-NBS-LRR class) 351 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral132g00003 Pral-Chr132 60580 62747 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral132g00003 191 620 WRKY Transcription Factor Family AT5G45050 34.066 4.90e-69 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral132g00003 - - pcin:129315185 976.852