Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral132g00002 ATGGAGTATTTGGAGAGCAGCTCCTCATCGTTGAAACCGAGTCATGTATATATCAGCTTTAGAGGTGATGAAGAGACTCGTAAATTCATGCATAGCCTTTTGGCTGCTCTGAAAGCAGAAGGCTTCAGAATCTTTGGAGATGATAAGAAGCTTGAAACGCCGGGCTCCAATCTTCCACCTCACCTTCTTCAAGCAATTCGTGAGTCGTGGATTTGGATTGTTGTCTTCTCCAAGAACTATGCTTCTTCATGTTGGTGTTTAAAGGAACTGTCACAGGTTTTGCGCATCATTCTTTCTCAGGATGAATCTCAATTGTCTTGTGCGGACTCATCATCATCAGTTTTTGCGCATCCATTGTACGCTGTCGATGCTGAACGACAAGAAATGTGCGAAGCAGACATAGACAAGGTGAACAGATGGAGGCAAGCTCTGAAACGAGGGTTCCGTGTCTCTGGGCGCTGGAGTGCATCAGATAGGGTTATAGCAGTTTTTTACGATGTGGATCCAAAATCCTTTCCTCAACATATTCAACAAGCATGCACACAAGATTCATTTGAGATAACCCAATGGGAAGATATCGAACAAGTGGCCAGTTCCCCTGGCTGGCAAGTGCGGAATGACTCAGGGTTACAGGTTATTCCAAAAACTGTTAAAGAAGTCAAGTCTAAAATAGATAAACTATTTTATGACTTCTTCGGATTTGTTGGGATGCAATCTCAAGTGGAAGAAGTAGAAAAGCTTTTGGATTTGAATGCAGATGATGAAGTTCGAGTTGTTGGCATTTGTGGTATGAGTGGATTGGGGAAATCTTCTATTGCTACTGTTTTATATCTTAAGACCTTTCACCTTTTTGATGCCTTTTGTTTCCTTCCCAATCTGAGTGGACGTTTAAAGCATGGTGACATAACCCTACAAGAACTTCTGCATAGACATTTGAGGACAGAAAATTCAGAGATGAAGGATTTTCTAGACAAAGAGTTCTTACTAGGGGAAAGGCTAAGAAAGCACAAGTTTCTTATAGTTCTTGATGGTGTTGATCTTGTACAACATCTACAGGAGTTGAACTTAGTTGAAAAATCCAATTGTTTTGGCGGGGACAGTAGAATCATTATAACAACTAGAGATGAACAAGTCCTTCAAAAATATGAGGTTAATACCATTTATAGACCTAAACTCTTGTCCAGGGACGAAGGTTTCAAACTATTTTGTTCTAAAGCTTTTCTAGGGGGATATCCGATTGATGATTTCGAAGGGATGATATATAGGGTGTTGGAATATGCTAATGGCCTTCCATTAGCAATTGAAATATTGGGTTCATCCTTTTTTGGAAAAGGCGTTGCAGAATGGAGAAGTTTCCTGGATAGGGAAGAAATTATTCCTCCCTATGAGATCACAAGGGTGCTTAGAAAAAGTTTTGACGAACTCGATGACATGAAAATTCTTTTTCAGAAGTCGGTCATCACAATTGCAAATGAGAGGATACAAATGCATAGTATGCTGCAAGCAATGGGGCGAGATATTATTCGACAGCAATATCCGTATCAACAAAGCCGATTATACCTTTATAGTGACATTAAATCTGTTATGGAGAAGAAAAGAAACATGGTGATGGAAAATGTTGAAGCTCAGCCAGATGATAGTGAATCTGATATGGGGAGAGAGAGAGAGACATGGGTGATGGAAAATGATGAAGCTCAGCCAGATGACAGCGAATCTGACATTGAGAGAGAGAGATACACATGGCTGATGGAAAATGTTGAAGCTCAGCCAGATGACAGTGAATCTGATATTGAGAGAGAGAGATACACATGGATGCGTTTATACTCCCAGGGGATGGAAAATGTTGAAGCTCAGCCAGATGACAGCGAATCTGATATTGAGACAGAGAGACACGCATGGATGCGTTTATACTCCCTGGGGATGGAAAATGTTGAAGCTCAGCCAGATGACAAGGAATCTGATATTGAGAGAGAGAGACACGCATGGGTGATGGAAAAAGTTGAAGCTCAGCCAGATGACAGCGAATCTGATATTGAGAGAGAGAGATACCCGTGGGTGACGGAAAATGTTGAAGCTTGGTCAAATGACAGCGAATCTGATATTAAGAGAGAGAGATACGAACGGGTGATGAAAGTTGAGGCTCTGCCAGTTCACGTCAACGCTGTTTTTGAGAGATATAGATACACATGGATGGTGGAAAAAGTTGAAGCTATAGCCTTGGATTTGGAAGAGCCAAAAATGGCCTCATTGAGGGTTGATGCTTTATCAGATATGATCAACCTCAGATTGCTGATATTCCATAACGTGGAATTTTCTGGAACCCTTAGTAATCTTTCAAGCAAGTTGCGATATGTTTCGTGGCATCAATATCCTTTCACTTCTTTGCCATCGGGTTTTCAATCTGACACACTTGTTCAACTGATTATGGCTGAAAGCAACATGACAGAAGTGTGGAAGGGCAGAATGATGCTCCCTACTTTGAGAAAACTGAATCTAAGTGGCTCCAAAGCTTTGACAAAGACGCCAGATTTTGGTGGGGTTCCAAATCTTGAGAAGCTAGAGCTCGAAGGATGTACTGGATTGTTGCAACTTGATCCATCTGTTGCTCAACTTCCAAAGCTCAGATTCTTGAACTTGAAAGGTTGCATCAATCTTGTCAGTATCCCTAATTCCATGTTTTGTCTGAACTCGTTGGAAGTCCTAAATCTAGCTGGCTGCTCTAAACTTGCATGTTGCTTGAAGTTTTCTCCAATGAGGAGTTTGATACAAGTGAAACTGCTTAGCATCTGGGACAGTCCATTCTTGGAAAAAATTTTGTACTTTCTTCTGTTGGTTTTGCCAGAACAAAAGAGATATCATGACTTCGTTTCTTCTTGTCTTATTTACTTGATGTGTATTTGTGAGGTCAAATATTCTGGCAAACGAGGAAACAACATGGGTTTGCCTCTTATTACTTGTTTTGTTTTTAATTCTGCTGCCTATCGTGTAGCTCGGGTAATTAACTCTGTCAATTTGCAGAGAATCAGAGACTTCAGAGTTCAATCTTCAATTTCCCTCTTTGTGTGGCTTCTCCCAGGGACTGAAGCAGCAAGTTTGATGGCCTTCGTTTTGCAGTCTCGTAGCCGTTCATCAGTAGTATTCGCAAAGCATTACCTCGTCGCCGTCTTCGATGCTGCTAAATGCTGTAAACAGTAA 3195 0.4113 MEYLESSSSSLKPSHVYISFRGDEETRKFMHSLLAALKAEGFRIFGDDKKLETPGSNLPPHLLQAIRESWIWIVVFSKNYASSCWCLKELSQVLRIILSQDESQLSCADSSSSVFAHPLYAVDAERQEMCEADIDKVNRWRQALKRGFRVSGRWSASDRVIAVFYDVDPKSFPQHIQQACTQDSFEITQWEDIEQVASSPGWQVRNDSGLQVIPKTVKEVKSKIDKLFYDFFGFVGMQSQVEEVEKLLDLNADDEVRVVGICGMSGLGKSSIATVLYLKTFHLFDAFCFLPNLSGRLKHGDITLQELLHRHLRTENSEMKDFLDKEFLLGERLRKHKFLIVLDGVDLVQHLQELNLVEKSNCFGGDSRIIITTRDEQVLQKYEVNTIYRPKLLSRDEGFKLFCSKAFLGGYPIDDFEGMIYRVLEYANGLPLAIEILGSSFFGKGVAEWRSFLDREEIIPPYEITRVLRKSFDELDDMKILFQKSVITIANERIQMHSMLQAMGRDIIRQQYPYQQSRLYLYSDIKSVMEKKRNMVMENVEAQPDDSESDMGRERETWVMENDEAQPDDSESDIERERYTWLMENVEAQPDDSESDIERERYTWMRLYSQGMENVEAQPDDSESDIETERHAWMRLYSLGMENVEAQPDDKESDIERERHAWVMEKVEAQPDDSESDIERERYPWVTENVEAWSNDSESDIKRERYERVMKVEALPVHVNAVFERYRYTWMVEKVEAIALDLEEPKMASLRVDALSDMINLRLLIFHNVEFSGTLSNLSSKLRYVSWHQYPFTSLPSGFQSDTLVQLIMAESNMTEVWKGRMMLPTLRKLNLSGSKALTKTPDFGGVPNLEKLELEGCTGLLQLDPSVAQLPKLRFLNLKGCINLVSIPNSMFCLNSLEVLNLAGCSKLACCLKFSPMRSLIQVKLLSIWDSPFLEKILYFLLLVLPEQKRYHDFVSSCLIYLMCICEVKYSGKRGNNMGLPLITCFVFNSAAYRVARVINSVNLQRIRDFRVQSSISLFVWLLPGTEAASLMAFVLQSRSRSSVVFAKHYLVAVFDAAKCCKQ 1064
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral132g00002 1064 Gene3D - 6 226 IPR035897 -
Pral132g00002 1064 SMART till_3 13 153 IPR000157 GO:0007165
Pral132g00002 1064 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 101 IPR035897 -
Pral132g00002 1064 Pfam NB-ARC domain 238 451 IPR002182 GO:0043531
Pral132g00002 1064 Gene3D - 227 387 IPR027417 -
Pral132g00002 1064 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 228 477 IPR027417 -
Pral132g00002 1064 Gene3D Ribonuclease Inhibitor 731 927 IPR032675 -
Pral132g00002 1064 PRINTS Disease resistance protein signature 332 346 - -
Pral132g00002 1064 PRINTS Disease resistance protein signature 258 273 - -
Pral132g00002 1064 PRINTS Disease resistance protein signature 427 441 - -
Pral132g00002 1064 PRINTS Disease resistance protein signature 893 909 - -
Pral132g00002 1064 Pfam TIR domain 16 104 IPR000157 GO:0007165
Pral132g00002 1064 SUPERFAMILY L domain-like 739 934 - -
Pral132g00002 1064 MobiDBLite consensus disorder prediction 546 562 - -
Pral132g00002 1064 MobiDBLite consensus disorder prediction 542 573 - -
Pral132g00002 1064 Gene3D - 392 476 IPR042197 -
Pral132g00002 1064 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 15 912 IPR044974 GO:0006952
Pral132g00002 1064 ProSiteProfiles TIR domain profile. 12 171 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral132g00002 Pral-Chr132 17390 24814 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral132g00002 812 942 WRKY Transcription Factor Family AT5G45050 29.801 2.93e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral132g00002 - - pcin:129300842 578.556