LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral1326g00008	ATGGATCCCGACACATTCACCTCCAGCATTTTCAAGTGGGACCCACGCACCATCCTCTCAACTTCCGCGCTTAACCGCCCGCCGCTTCTGGAGTACACGATGGCTCCGCCCCCGCCGACCTCGGCTGCCGTCGTGAGGTGCTCCAGCAGGGAGGTGGGAGGGCTGGATGAGTTGTTCCAAGCTTATGGGATTCGGTACTACACGGCGGCTAAGATAGCGGAGCTTGGGTTTACCGTGAGCACTCTTGTCAACATGAAGGACGATGAGCTTGACGAGATGATGAACAGCCTCTCTCAGATTTTTCGCTGGGATCTCCTCGTCGGAGAACGATACGGTATCAAAGCCGCCGTGAGAGCCGAACGACGACGTATCGACGAAGAGGATTTGCGGCGTCGTAACCCTCTCTCGGCGGACACCACCACGAACGCACTTGACGCTCTCTCTCAAGAAGGTTTGTCGGAGGAACCAGTGGTGCAACAAGAGAAGGAGGCGGGAGGCAGCACGTGGGAGGTGATTGCGGCGACGGAGAGGAGGAAGCAGCAGCGGAGGAGAAGGAAGACGGCGTCGAGGATGAAGACAAGCCAGAACCACCATGACGACGAGAACGACGATCCGGAAGAGGATGGCGAAGCAGAAGACATGAACGAAGAAGGAATGAACAGCGGAGGATGCGAGAGACAGAGAGAGCACCCATTCATCGTGACGGAGCCTGGGGAAGTGGCACGTGGCAAGAAGAACGGCCTGGATTATCTCTTCCACCTCTACGAACAATGCCGCGAGTTCTTAATCCAAGTCCAGAACATGGCCAAGGAACGCGGCGAGAAATGCCCCACCAAGGTGACAAACCAGGTGTTTAGGTACGCGAAGAAGGCAGGGGCGAGCTACATCAACAAGCCCAAGATGCGACATTACGTGCACTGCTATGCCTTGCACTGTTTAGACGAGGAGGTGTCGAACGAACTGAGGATGAGGTACAAGGAGAGGGGTGAGAACGTGGGCGCGTGGAGGCAAGCCTGTTATAAGCCGCTTGTGGCCATCGCCGCGCGTCAGGGTTGGGACATCGATGCCATCTTCAACGCCCATCCTCGTCTCTCCATTTGGTATGTCCCCACCAAGCTCCGTCAACTTTGTCACGCCGAGAGGAACGCCGCCGCCGCCGCCGCCGCCACTGCCGGAGCTTCCAGTTCTGTCTCTGTTGGAAGCGCGCACCTCCCTTTCTGA	1221	0.5758	MDPDTFTSSIFKWDPRTILSTSALNRPPLLEYTMAPPPPTSAAVVRCSSREVGGLDELFQAYGIRYYTAAKIAELGFTVSTLVNMKDDELDEMMNSLSQIFRWDLLVGERYGIKAAVRAERRRIDEEDLRRRNPLSADTTTNALDALSQEGLSEEPVVQQEKEAGGSTWEVIAATERRKQQRRRRKTASRMKTSQNHHDDENDDPEEDGEAEDMNEEGMNSGGCERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCREFLIQVQNMAKERGEKCPTKVTNQVFRYAKKAGASYINKPKMRHYVHCYALHCLDEEVSNELRMRYKERGENVGAWRQACYKPLVAIAARQGWDIDAIFNAHPRLSIWYVPTKLRQLCHAERNAAAAAAATAGASSSVSVGSAHLPF	406

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral1326g00008	406	PANTHER	PROTEIN LEAFY	1	393	IPR002910	GO:0003677\|GO:0006355
	Pral1326g00008	406	MobiDBLite	consensus disorder prediction	201	215	-	-
	Pral1326g00008	406	Pfam	Floricaula / Leafy protein SAM domain	51	128	IPR035079	-
	Pral1326g00008	406	Pfam	DNA Binding Domain (C-terminal) Leafy/Floricaula	221	385	IPR035209	GO:0003677
	Pral1326g00008	406	MobiDBLite	consensus disorder prediction	147	229	-	-
	Pral1326g00008	406	Gene3D	Protein LEAFY	222	391	IPR038276	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral1326g00008	1	382	Orphan Transcription Factor Family	AT5G61850	63.930	2.23e-158	451

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	LFY	Pral1326g00008		C_LFY_FLO	5.3e-108	CL0123

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral1326g00008	-		-	gmx:100798196	594.349