Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1322g00004 ATGGACGCGCCACAAGATTATTCAAACCTAATGGCCACTCCTTTCTCTAACACTGAGGATTCGTATGTATTCAGCTATATGAATGGACTTTCTCCAATAAAACCAGATAAGCCTGTTCAGCAAAATCAGGCATTAAGCTCCACAATCTTTTGCTCCCCTCCATCTGTTTTCACATCCCCCCATGTCTCCTATCGCAAGGAACATGGAATCCTCCATAGCCACGCTCCTTTTCTGGATTCACCAAAGCCAACTGTTTCATTTGAACGTGGCTTACAAATAAGTTCAGGCGAAGAAGCTGTTTCATACACAGATCTTGCACATCGTGACTCAAGTGAGCTCCAGGAAAGTACTGATCAAGGGAATGCTTTGGTTGAGCAATTAAGCAGAAAATGTACACTTGACATGCCACAGGGTTCAATGTATGATTGTGGGAGCCCTAGTTCTGACGAGACAATTTCTAGCATTGTCCGGGGATTATTTGCACCAGTATCAGAAAATAATGAACGACCAGGATGTGATTGGGAGGGTCTTACTCCCAATGAGACAGGTACTCTTGAGGGTCTGACCCAGAAATCATTGGGTCCCATAATTAGACCTGGTTTTTTTATGCCTCCGTTACCACAAAATAGCTTTAGGAACTCGCACACTGTTGACTCACAATATCAAAGTATAGTCAAAACAGCCACAGAAACTGAGCAAAGGCAGGACAATATTTTCAATTTGGCTGTGATGGCTAGCAACCTCAATGAGAGAATGGATAATGAGCCTTTTTTCGCAGCAGATCACCGTATGCCGAATAATTCCAGTACATCACAATGTTTGAAGTGTAGTGTTCCTAATAATAAGTGGTTTATTCCTACAACCGTTAATGTTAATTCCCATATGCACATTTTGCCGGGAACCCAATCGCACTTGGATGTTCCACCTCCCTTAAAAGACTCCAGTATTATGAACAATAGATGGCCACCCACAAGACAAATCAGTCCATCCAACTCATCTCCTTCCTTGCATGTCTCTACAAGCCAACAGCTTGATCAAATATCACCAATGTATAGAATGCCCCAAAGAGACCTGCATGCCCAAAACGGTTGGACTCAGCCGGCATTAGATTATTCACAACCAACAGCTCTATTTATTGGTGAAGGTTATAATCGAAATAGCTCCAACAGGAAAAGGCGTAAGTCAGAGCCTGCTAAAGAAGGTGAAGGTTGCAAGCATTGCAAATGCAAGGTCTCAAATTGCTTGAAGCTTTACTGCGAGTGCTTTGCTTCTCGCGTCTACTGCGTGGGATCTTGCTCCTGTCGAAACTGCTTCAACAAGCCAATTCATGAAGAAATTGTGCTTAAAACTCGCAAGGACATTGAGTCTCGTAACCCTCTTGCATTTGCTCCCAAAGTCGTCATCACAAATGCTGGTTCTTTACCTGAAACTGGGGCTGATCCAAACAAAACTCCAGCTTCAACAAGACACAGAAGAGGATGCAACTGCAAGAAATCTGGGTGCCAAAAGAAATATTGTGAATGTTACCAGAATGGAGTTGGTTGCTCCATTAGATGCAGATGTGGAGGATGCATGAACGAATATGGGAGAAATTATGGTTCTTCTGAATTAAGAATAGAAACTGAAACCGGAACAAATGAATCCTGTGAAATGGTTATGGCAGAAAAAGCTTCACAGATAAATGAAACTCTAAAAGGAAATCCAAATTCTGCTGCTCCTTCCCCAACATCTGCAGGGTCTCGCAGATCAAGGGCTCCATTGCGTGGTTCATCAAGGAGAAGACAACCTAGTAATTTGATCACTCCAGCTGCTTCTAGATTTCATGCGAGCCTGTTAAACTTTGAATATAATCTCCAAAGCAATCCAGAACTGGAAATTCCAGAGATTCTCCAAGTTGGTGATGGCTCTCCTGTCCCATGCATGAACAACACTTCTAATAGCCCTCCATTTACTTCTTTCAACCCTCGCCAATAG 1974 0.4286 MDAPQDYSNLMATPFSNTEDSYVFSYMNGLSPIKPDKPVQQNQALSSTIFCSPPSVFTSPHVSYRKEHGILHSHAPFLDSPKPTVSFERGLQISSGEEAVSYTDLAHRDSSELQESTDQGNALVEQLSRKCTLDMPQGSMYDCGSPSSDETISSIVRGLFAPVSENNERPGCDWEGLTPNETGTLEGLTQKSLGPIIRPGFFMPPLPQNSFRNSHTVDSQYQSIVKTATETEQRQDNIFNLAVMASNLNERMDNEPFFAADHRMPNNSSTSQCLKCSVPNNKWFIPTTVNVNSHMHILPGTQSHLDVPPPLKDSSIMNNRWPPTRQISPSNSSPSLHVSTSQQLDQISPMYRMPQRDLHAQNGWTQPALDYSQPTALFIGEGYNRNSSNRKRRKSEPAKEGEGCKHCKCKVSNCLKLYCECFASRVYCVGSCSCRNCFNKPIHEEIVLKTRKDIESRNPLAFAPKVVITNAGSLPETGADPNKTPASTRHRRGCNCKKSGCQKKYCECYQNGVGCSIRCRCGGCMNEYGRNYGSSELRIETETGTNESCEMVMAEKASQINETLKGNPNSAAPSPTSAGSRRSRAPLRGSSRRRQPSNLITPAASRFHASLLNFEYNLQSNPELEIPEILQVGDGSPVPCMNNTSNSPPFTSFNPRQ 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1322g00004 657 SMART CXC_2 402 443 IPR033467 -
Pral1322g00004 657 SMART CXC_2 489 530 IPR033467 -
Pral1322g00004 657 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 9 250 IPR044522 GO:0003700
Pral1322g00004 657 ProSiteProfiles CRC domain profile. 403 529 IPR005172 -
Pral1322g00004 657 MobiDBLite consensus disorder prediction 386 404 - -
Pral1322g00004 657 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 405 440 IPR005172 -
Pral1322g00004 657 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 492 527 IPR005172 -
Pral1322g00004 657 MobiDBLite consensus disorder prediction 563 600 - -
Pral1322g00004 657 MobiDBLite consensus disorder prediction 637 657 - -
Pral1322g00004 657 MobiDBLite consensus disorder prediction 381 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1322g00004 Pral-Chr1322 22647 26766 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1322g00004 12 574 CPP Transcription Factor Family AT3G22780 35.667 1.41e-78 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Pral1322g00004 TCR 1.6e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1322g00004 - - gmx:100804447 441.039