Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1319g00004 ATGGAGTTTGGACTTCAAAACAAAGACAAGTCTGAGAGAATAAGGTGGGGTTATTCTTCAGAGGAAGCAACACAAGTGAGATCCTATACCTGTGGTTTCTGTCAGAAAGGGTTTTCAAACGCTCAAGCTCTTGGTGGTCACATGAACATCCATAGAAGAGACAGAGCAAGGCTGAGGCAACAATATTCTCAAGAGAATAATTTGCTCTCTCTTGACACGAACCCTAATGATGATCTTTATCAAGATCATCAGCATCATCAGAACCCTACTGCAGGAATTTCTCAGCTTCCTATTTTTTTCGGCGTAGAGGAGAAGATGGAGTTGGACCTTGAGCTTCGGTTAGGTCCTGAGCCAATGGAGGTATAA 366 0.429 MEFGLQNKDKSERIRWGYSSEEATQVRSYTCGFCQKGFSNAQALGGHMNIHRRDRARLRQQYSQENNLLSLDTNPNDDLYQDHQHHQNPTAGISQLPIFFGVEEKMELDLELRLGPEPMEV 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1319g00004 121 Gene3D Classic Zinc Finger 7 92 - -
Pral1319g00004 121 ProSiteProfiles Zinc finger C2H2 type domain profile. 29 56 IPR013087 -
Pral1319g00004 121 PANTHER OS07G0101800 PROTEIN 11 88 - -
Pral1319g00004 121 MobiDBLite consensus disorder prediction 69 92 - -
Pral1319g00004 121 FunFam Zinc finger protein-like 26 52 - -
Pral1319g00004 121 ProSitePatterns Zinc finger C2H2 type domain signature. 31 51 IPR013087 -
Pral1319g00004 121 SUPERFAMILY beta-beta-alpha zinc fingers 26 56 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1319g00004 Pral-Chr1319 56639 57222 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1319g00004 25 66 C2H2 Transcription Factor Family AT3G09290 73.810 1.42e-18 75.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pral1319g00004 None None None