Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1313g00009 ATGCAAATGTGGAAGCAAGCTCTTAATGAAACTGCAAACTTAGCTGGTTATGACTCTCGCACATTTAGGGATGAATCCGAATTGATTCAAAAGATTGTCAAAGACATATTGCAGAAACTGAATCACAAGTACCCCCCAGCTGAACTAAAAAGACTCATAGGCATTGAGGACAACTGCGCAGAGATTGAATTATTGTTGAAAGATGCCAAAACAAAAACCATTGGAATATGGGGCATGGGGGGTATCGGCAAGTCAACCATTGCCAAAACTATATTTTTAAAATATTCTTCCCACTATGATTATTCTTGGTTCTTGGAAAATATAAGAGCAAAGTCTAAAAATGGACTTACTGAATTACGCCGTAAATTTCTCTCTCGTCTCCTAAGGGATGATTCCCTTATTGATACTGCAACCTCTTTTCTTGAGTCGAGGCTTAGTCGTATGAAGGTTTTTGTTGTTCTTGATGATATCAGTACGAAGGGGCAATTAGAAGACTTGGTTGGAGAACCTTTTTGCTTTGGGCCAGGAAGTAAAATTCTCATCACAACAAGAGACAAGCACGTGCTTAGCAAAGGAGTTGACATAATATATAAGGTTAAGGAATTGGAGTTCCATCAATCCCTCGAACTTTTCAGCTTGAATGCCTTCAGCACTAGCCTACCCATAATGGGGTATGAAGAACTGACAGACAGGGCAGTTGTTTATGCACAAGGAATTCCATTGGCTTTAAAAGTCCTGGGTTCATATCTTCGTGGTAGAAGTGAAATTGAATGGAAGAGTGCTTTAAGGAAACTTGAGAAGAGTCCTCATCAAGATATTCAAAAGGTGTTAAGGTTGAGTTATGATGGATTGGATGAGGAGGAGAAGGCAATATTTCTAGACATTGCTTGCTTTTTGGTGGGACAGCTGACAGAATTTGTAATCAGTTTATTAGATAGCTTTGGCTTCTGTGGAGCAATTGGGGTAAGAACACTTCAAGACAAAGCTCTCATAGACGTCTGTGATGGTTCACGTGTTGAAATGCATGATTTAATACAACAAATGGGTTTGCAAATAGTTCGTGAAGAGTCTATTGATGAACCTGGAAGACGTAGTAGATTATACAATTTTGAAGAAATTTATGATGTTTTGGCTAATAACAGGGGATCAAAGAAAGTTGAAGGAATAATGTTGGATGTTTCTCAAATTAAAGATGTACATTTGGAAGCTGACATTTTCAAGAAGATGCCTAATATAAGATATCTCAAATTTTATTCTAATAGTTATTCTCCTTTCCACACTTCCTCAAGTCATGTGCACCTTCCAGAAGGTCTCAAATTTCTTCCTAATAAGTTGAGGTATCTAGAGTGGTATGGATTCCCCCTTAAATCTCTGCCGTCCACTTTTTGTCCTGAAAAACTTGTTGAGCTCCGCATGCGCGATAGCCATCTACAAAAGCTTTGGAACGGCGTTCATGATTTTGTGAGCTTACAAGAGATAGACCTTAGTGGTTCCAAACAACTACAAGAGCTGCCTAATCTCTCCAAATGCTTGAATCTCAAAGTGGTGGAACTTGAGCAATGCGAAAGTTTGTGCTCTGTTCATTCCTCAATCTTGTCCCTCTACTCGCTTGTTGAGTTGAACTTACGCGACTGCAAGAAACTTGAGAGTCTAAAAAGTGAGTTACATTTAAGATCTCTAGAATATATCGATGTGTTCAGGTGCTGGAATCTCAAGGAGTTCTCAGTGTCATCGGATGAACTGAGAGACTTGGAATTAGACGAAACAGGAATTGAAATCTTGCACTCGTCTGTAGCGCGTTCAAGTAACTTGAAAAGCATCGGTCTTAGAGGCTTAAGACTTGTGAACCTCCCCGACCAATTATCCTGCTTGACAAGTTTGAATGCTCTTAGGCTTTACGACTGTGAAATCATTGATGATTTGAAGCTACATATCTTTTTCGATGGCATGTTGGCTTTGAGAGAAGTGACGCTGAAGAGGTGCGGTAACATAATTGACCTCCCCAGTAACACTAAGCATCTTTTAGGATTGAGATCTCTTGACGTAATGGGTTGTAGGAGGCTTCGTTCTTTACCAGAATTACCACCATCCATTGCAACCCTAATTGCCGATGATTGCAAGTCGTTGGAAATTGTGTCAACTTGGAGATCAAGTGGTGATCAAATGCACTTCAGATTCAATAACTGTGTGCAACTGATTGAACAATCGCTTCACAATATCATGGAGGCTGCTGCTTATTCTATACCTTATTGTTTATTGCATAAATATAAGTACATGGGTGATTGTTCGATTCATAAATATAATAGATCCCTCCATCGTTATACGATTTGTGTTACCGGAAGCAAAGTACCAGAGTGGATCAAATACAGGGCAGCACAAAGCTCCGTAACTATTGAACTCCCTCAAATTTCAGACCTGACGAGTTTCTTCTTCTGCATTGTAGTTGATGTTCATTCAGAAATTAACGGTGGAAGTCAAGTTTTGGGTGCACATGCTACTTGGAAGGTTTTAAAGCGGCAGATTCAACACATGGCACGGTTCTTCCAGATATGA 2553 0.3964 MQMWKQALNETANLAGYDSRTFRDESELIQKIVKDILQKLNHKYPPAELKRLIGIEDNCAEIELLLKDAKTKTIGIWGMGGIGKSTIAKTIFLKYSSHYDYSWFLENIRAKSKNGLTELRRKFLSRLLRDDSLIDTATSFLESRLSRMKVFVVLDDISTKGQLEDLVGEPFCFGPGSKILITTRDKHVLSKGVDIIYKVKELEFHQSLELFSLNAFSTSLPIMGYEELTDRAVVYAQGIPLALKVLGSYLRGRSEIEWKSALRKLEKSPHQDIQKVLRLSYDGLDEEEKAIFLDIACFLVGQLTEFVISLLDSFGFCGAIGVRTLQDKALIDVCDGSRVEMHDLIQQMGLQIVREESIDEPGRRSRLYNFEEIYDVLANNRGSKKVEGIMLDVSQIKDVHLEADIFKKMPNIRYLKFYSNSYSPFHTSSSHVHLPEGLKFLPNKLRYLEWYGFPLKSLPSTFCPEKLVELRMRDSHLQKLWNGVHDFVSLQEIDLSGSKQLQELPNLSKCLNLKVVELEQCESLCSVHSSILSLYSLVELNLRDCKKLESLKSELHLRSLEYIDVFRCWNLKEFSVSSDELRDLELDETGIEILHSSVARSSNLKSIGLRGLRLVNLPDQLSCLTSLNALRLYDCEIIDDLKLHIFFDGMLALREVTLKRCGNIIDLPSNTKHLLGLRSLDVMGCRRLRSLPELPPSIATLIADDCKSLEIVSTWRSSGDQMHFRFNNCVQLIEQSLHNIMEAAAYSIPYCLLHKYKYMGDCSIHKYNRSLHRYTICVTGSKVPEWIKYRAAQSSVTIELPQISDLTSFFFCIVVDVHSEINGGSQVLGAHATWKVLKRQIQHMARFFQI 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1313g00009 850 FunFam Disease resistance protein (TIR-NBS-LRR class) 203 285 - -
Pral1313g00009 850 Pfam Leucine Rich Repeat 466 484 IPR011713 -
Pral1313g00009 850 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 4 575 IPR044974 GO:0006952
Pral1313g00009 850 PRINTS Disease resistance protein signature 73 88 - -
Pral1313g00009 850 PRINTS Disease resistance protein signature 532 548 - -
Pral1313g00009 850 PRINTS Disease resistance protein signature 144 158 - -
Pral1313g00009 850 PRINTS Disease resistance protein signature 236 250 - -
Pral1313g00009 850 Gene3D Ribonuclease Inhibitor 365 577 IPR032675 -
Pral1313g00009 850 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 36 295 IPR027417 -
Pral1313g00009 850 SUPERFAMILY "Winged helix" DNA-binding domain 272 377 IPR036390 -
Pral1313g00009 850 Gene3D - 202 285 IPR042197 -
Pral1313g00009 850 FunFam Disease resistance protein RPS4 383 579 - -
Pral1313g00009 850 Gene3D Ribonuclease Inhibitor 578 743 IPR032675 -
Pral1313g00009 850 Pfam NB-ARC domain 64 283 IPR002182 GO:0043531
Pral1313g00009 850 Gene3D - 38 196 IPR027417 -
Pral1313g00009 850 SUPERFAMILY L domain-like 389 715 - -
Pral1313g00009 850 Gene3D - 1 37 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1313g00009 Pral-Chr1313 65371 83700 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1313g00009 4 714 WRKY Transcription Factor Family AT4G12020 35.880 3.35e-102 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1313g00009 - - pcin:129288061 949.888