Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1313g00007 ATGGCCTTTGAAGCTGCTTCATCCTCTTCTTCTGCTCAGTTGGAAGAGATCAGTCTTACTGGTTCAAGTAAATTGGAAGAGCTCAGTCCTAGTAGCTCAAGACTTGTACCAGAACGACCACCATCCATTGCAAACCTAAATGCCAGTGATTGCAAGTCGTTGGAAATTGTGTCAACTTGTAGACCATCAGGTGGTCAGCCAGTATACTTCTCATTCAAGAATTGTGTGCAACTGAATGAACAATCGCTTCCCAACATCATGGAGGCTGCTGCCTATTCTATACCTTATTTTTTACTGCATAAAAACAAGAATTACCTGGTTCGTTTTTTGATTTGTGTTGCCGGAAACAGAGTACCGGAGTGGTTCAAATACAGGGCAGCACAAAGCTCCGTGATTGTTGAACTCCCTCGACTTTCAGACTTTGCGAATTTCTTCTTCTGTACTTTCTCAATACTACACAGTGCTCTCCCTGTTGCTCAATCAGATAGAGATATGGCCCTTCTTGCTACTTCATCCTCTTTCTCTGCTCAATCCCTCCCCAAGAAGTATGACGTTTTCATCAGCTTTAGGGGGGAGGACACTCGCTCCAACTTCACTAGCCATCTTTATGATGCTTTCCGCAGAAAAGGCATCAGAAGCTACATAGACTCCCAACTCGTGAAAGGAGATGAGATCTCACCATCACTTCTTCTAGCTATCGAGGATTCATATGCATCTGTGGTTGTGTTCTCTGAAAATTATGCTTCTTCAAGATGGTGCTTGGATGAACTCACCCATATACTCCATTGCAAAAGGGTTCAAGGACAGATTGTTGTTCCTGTCTTCTATAAAGTTGAGCCATCTCATGTACGCAATCAGACTGGGGTTTTCGAGCAAGCATTTGAGAATTATGAGAGAGATCTCAAGGTTGACCAACACAAAATGCAAATGTGGAAGCAAACTCTTCATGAAGCTGCAAACTTAGCTGGTTATGACTCTCACACGTTCAGGGATGAATCTGAATTGATTCAAAAGATTGTCAAAGACATGTTGCAGAAATTGAATCACAAGTACCCGCCTGCTGAATTAAAGGGACTCGTGGGTATTGATGACAACTGCAAAGAGATAGAATCATTGTTGAAAGACGCTAAAAGCATTGGAATATGGGGCATGGGGGGTATCGGCAAATCAACCATTGCCAAATTTATATTTTTAAAATATTCTTCCCATTATGAAGGTTCTTGCTTCTTGGAAAACGTTAGGGAAAAGTCTCAAAATGGAATTGCTGAATTACGTCACAAATTTCTCTCTTGCATGCTAAAGGAAGATCTCCTTATTGATGCCACGACCACTTTTCTTGAGACTAGGCTTAGTCGTATGAAAGTTTTTGTCGTTCTTGATGATATCAGTACTTTGGAGCAATTAGAATATTTGGTTGGAGGGCCTTTTTGTTTTGGGCCAGGAAGTAAAATTCTCATCACAACAAGAGATAAGCACGCGCTTAGCAAAGGAGTTGACATAATATATAAGGTTAAGGAATTGAAGTTCCATCAATCCCTTGAACTTTTCAGCTTGAATGCCCTCAGCACTAGCCTACCCATAATGGGGTATGAAGAACTAACAAAAACAGCAGTTGTTTATGCGCAAGGAATTCCGTTGGCTTTAAAAGTTTTGGGTTCATATCTTCGTGGTAGAAGTGAAATTGAATGGAAGAGTGCTTTAAGGAAACTTGAGAAGAGTCCTCATAAAGATATTCAAAAGGTGTTGAGATGGAGTTATGATGGATTGGATGAGGAGGAGAGGAAAATATTTCTAGACATTGCTTGCTTTTTGAAGGGAGAGTTGACAGAAATTGTAATCAGTTTATTAGATAGCTTTGGTCTCTCTGGAGCAATTGGGATAAGAACACTTCATGACAAGGCTCTCATAGACGTCTATGATGGTTTACATGTTAAAATGCATGATTTAATACAAGCAATGGGTTTAAAAATAGCTTGTGAAGAGTCTATTGATGAGCCTGAAAGACATAGTAGATTATGCAATTTTGAAGAAATTTATGATGTTTTAGCTAATAACATGGGATCAAAGAAAGTTGAAGGAATAAAGTTGGATGTTTCTCAAATTAAAGATCTACATTTGGGAGCCGACATTTTCAAGAAGATGCCTAATATGAGAATTCTCAAATTTTATTCTCGCTGGGGCCCAAGTCATGTGCATCTTCCAGAAGGTCTCAGATTTCTTCCTAATAAGATGAGGTATCTAGAGTGGTATGGATTTCCGCTTAAATCTCTGCCGTCCACTTTTTGTCCTGAAAAACTTGTTAAGCTCTCCATGCGCAATAGCCATCTACAAAAGCTTTGGAACGGAGTGCATGATTTTGTGAGCTTACAAGAGATAGACCTTAGTGGTTCCAAACAACTCCAAGAGCTGCCCAATCTCTCTAAATGCTTGAATCTCAAAGTGGTACGACTTGTGGAATGCGAAAGTTTGTACTCTGTTCATTCCTCAATCTTGTCTCTCCACTCGCTTGTTCAGTTGGACTTATATAAGTGCAAGAAACTTGAGAGTTTAAAAAGTGAGTTACATTTAGAATCTCTAAAAGATATCAATGTGCAGTGGTGCTGGAATCTTAAGGAGTTCTCAGTGTCATCTAATAAACTGAGAGAATTGAATTTAGAATCAACAGCAATTAAAATCTTGCACCCATCTGTAGTGCGTTCAAGTAAATTGGAAGCGCTCAGTCTTGGTGGCTCAAGACTTGTGAACCTTCCCAACCAATTATCTTGCTTGACAAGTTTGACGGTTCTTAGGCTTTACGGCTGTCAAATCATTGATGATTTGAAGCTACATATCTTTTTCGATAGCATGTTGTCTTTAAGAGTAGTGGTGCTGGATTGCTGCCGTAACATAATTGACCTCCCCAATAACACTAAGCATCTTTTAGGATTGCGATTTCTTAGTATAAGGCATTGTAGGAGGCTTCGTTCTTTACCAGAACTCCCACCATCCATTGCAAGACTAGATGCTGATTATTGCGAGTCGTTGGAAATTGTGTCACCTTGTAGACCATCAAGTGGTGACCCAGTAGACTTCTCATTCCAGAATTGTATGCAACTGAATGAACAATCGCTTCACAATATCATGGATGCCGCTGCCTATTCTATACGTTATTGTTTATTGCATAAAGATGAGGATGACATAGATCCTTGTTGGATTAGTGTTCCCGGAAGCAGAGTACCAGAGTGGATCAAATACAGGGCAGCGCAAAGCTCCGTAATTGTTGAACTCCCTCCACTTTCAGACTCATTGCTTTTCTTCTTCTGCATTGTAGTTGATGCTGACTCAGAAAGTAACTGGGAATCTCACGGTTTGAAATGCTCATGCTACTTGGAAGGTTTTGATGTGAAGTATTCAGTATGGGAAGAGTTTTTTGGAGATTCGAAATCTGATCACGTTTTTATATGGGATGATTCCTTCACATATGAAGAGATAATGGATGAAATTAGAAGAAGAAATCAACAGTTGTTCGCTAACATGAAGCTTCACTTTGAATTTTCTATAGTAACTCATGAGGCTATTATCAATGGAGAAAGAAAAACAAGCAAGCCAACGATCAAAGAATGCGGGGTGTGGCCAGTATCTGTCTCAGAATGTCCGAAATTTGTTGAGGAAATGGAAATGGAGAGGAAAAGGAAGAGGCCCCGCGATGTTGAAGAGCAACAACCACCACTTCGGTTAAAAAAAATGGATACTCTCCTTTGA 3741 0.3999 MAFEAASSSSSAQLEEISLTGSSKLEELSPSSSRLVPERPPSIANLNASDCKSLEIVSTCRPSGGQPVYFSFKNCVQLNEQSLPNIMEAAAYSIPYFLLHKNKNYLVRFLICVAGNRVPEWFKYRAAQSSVIVELPRLSDFANFFFCTFSILHSALPVAQSDRDMALLATSSSFSAQSLPKKYDVFISFRGEDTRSNFTSHLYDAFRRKGIRSYIDSQLVKGDEISPSLLLAIEDSYASVVVFSENYASSRWCLDELTHILHCKRVQGQIVVPVFYKVEPSHVRNQTGVFEQAFENYERDLKVDQHKMQMWKQTLHEAANLAGYDSHTFRDESELIQKIVKDMLQKLNHKYPPAELKGLVGIDDNCKEIESLLKDAKSIGIWGMGGIGKSTIAKFIFLKYSSHYEGSCFLENVREKSQNGIAELRHKFLSCMLKEDLLIDATTTFLETRLSRMKVFVVLDDISTLEQLEYLVGGPFCFGPGSKILITTRDKHALSKGVDIIYKVKELKFHQSLELFSLNALSTSLPIMGYEELTKTAVVYAQGIPLALKVLGSYLRGRSEIEWKSALRKLEKSPHKDIQKVLRWSYDGLDEEERKIFLDIACFLKGELTEIVISLLDSFGLSGAIGIRTLHDKALIDVYDGLHVKMHDLIQAMGLKIACEESIDEPERHSRLCNFEEIYDVLANNMGSKKVEGIKLDVSQIKDLHLGADIFKKMPNMRILKFYSRWGPSHVHLPEGLRFLPNKMRYLEWYGFPLKSLPSTFCPEKLVKLSMRNSHLQKLWNGVHDFVSLQEIDLSGSKQLQELPNLSKCLNLKVVRLVECESLYSVHSSILSLHSLVQLDLYKCKKLESLKSELHLESLKDINVQWCWNLKEFSVSSNKLRELNLESTAIKILHPSVVRSSKLEALSLGGSRLVNLPNQLSCLTSLTVLRLYGCQIIDDLKLHIFFDSMLSLRVVVLDCCRNIIDLPNNTKHLLGLRFLSIRHCRRLRSLPELPPSIARLDADYCESLEIVSPCRPSSGDPVDFSFQNCMQLNEQSLHNIMDAAAYSIRYCLLHKDEDDIDPCWISVPGSRVPEWIKYRAAQSSVIVELPPLSDSLLFFFCIVVDADSESNWESHGLKCSCYLEGFDVKYSVWEEFFGDSKSDHVFIWDDSFTYEEIMDEIRRRNQQLFANMKLHFEFSIVTHEAIINGERKTSKPTIKECGVWPVSVSECPKFVEEMEMERKRKRPRDVEEQQPPLRLKKMDTLL 1246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1313g00007 1246 FunFam Disease resistance protein (TIR-NBS-LRR class) 179 349 - -
Pral1313g00007 1246 Pfam Leucine Rich Repeat 765 783 IPR011713 -
Pral1313g00007 1246 Gene3D - 507 590 IPR042197 -
Pral1313g00007 1246 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 342 600 IPR027417 -
Pral1313g00007 1246 Pfam NB-ARC domain 375 587 IPR002182 GO:0043531
Pral1313g00007 1246 Gene3D - 180 344 IPR035897 -
Pral1313g00007 1246 PRINTS Disease resistance protein signature 449 463 - -
Pral1313g00007 1246 PRINTS Disease resistance protein signature 378 393 - -
Pral1313g00007 1246 PRINTS Disease resistance protein signature 831 847 - -
Pral1313g00007 1246 PRINTS Disease resistance protein signature 541 555 - -
Pral1313g00007 1246 FunFam Disease resistance protein RPS4 688 878 - -
Pral1313g00007 1246 Pfam C-JID domain 1067 1203 IPR045344 -
Pral1313g00007 1246 SMART till_3 182 321 IPR000157 GO:0007165
Pral1313g00007 1246 MobiDBLite consensus disorder prediction 1219 1246 - -
Pral1313g00007 1246 SUPERFAMILY Toll/Interleukin receptor TIR domain 175 324 IPR035897 -
Pral1313g00007 1246 ProSiteProfiles TIR domain profile. 181 347 IPR000157 GO:0007165
Pral1313g00007 1246 SUPERFAMILY L domain-like 645 1049 - -
Pral1313g00007 1246 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 183 874 IPR044974 GO:0006952
Pral1313g00007 1246 MobiDBLite consensus disorder prediction 21 41 - -
Pral1313g00007 1246 Gene3D Ribonuclease Inhibitor 671 854 IPR032675 -
Pral1313g00007 1246 Gene3D Ribonuclease Inhibitor 855 1008 IPR032675 -
Pral1313g00007 1246 Gene3D - 345 500 IPR027417 -
Pral1313g00007 1246 Pfam TIR domain 182 361 IPR000157 GO:0007165
Pral1313g00007 1246 MobiDBLite consensus disorder prediction 21 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1313g00007 Pral-Chr1313 49283 57057 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1313g00007 181 986 WRKY Transcription Factor Family AT4G12020 34.898 9.58e-104 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1313g00007 - - pcin:129288061 1220.68