Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1313g00003 ATGTTGACCTGCATTGCGTGTTCCAAGCAGCGTAATGACAAGAGATCTCTTCCCCAACAAGATGAGCACGAAGAAGCTGCGGATACACCCAGCACCAAGCAGGCCATTAAGGCCCTCACAGCGCAGATCAAGGACATGGCGGTGAAGGCTTCTGGGGCATATAGAAATTGCAAGCCCTGTTCAGGATCTTCAAATGGTAACAGGAACCATAACTATGCTGATTCTGATATGGCTTCAGAATCAGCGAGATTTCACTGGGCGTACAAAAGTACTGGTAGCTCCAACTCAATCCCAAGGCTTTGGGGAAAGGAGATGGAGGCGAGACTGAAGGGGCTCTCTAGCGGGGAAGGAACGCCGGCGTCGGTGAGTGGCCGGACTGAGTCGGTGGTGTTCATGGAGGAGGATGAGCCCAAGGAATGGGTTGCTCAAGTAGAGCCTGGCGTGCTTATCACTTTCGTTTCGTTGCCTCAAGGTGGGAATGATCTGAAACGATTACGGTTCAGAACTGGCAAGATCCGAAGACCAAATCTACAGCATCCTCAGTTGAGTTGTTTACATCCTAAAGATGCAAATATTTCCGCCCCCACTGTTTGCCAAGCTCAAGAAGTGGTCAAGAATAAGTACCCTTAA 630 0.5 MLTCIACSKQRNDKRSLPQQDEHEEAADTPSTKQAIKALTAQIKDMAVKASGAYRNCKPCSGSSNGNRNHNYADSDMASESARFHWAYKSTGSSNSIPRLWGKEMEARLKGLSSGEGTPASVSGRTESVVFMEEDEPKEWVAQVEPGVLITFVSLPQGGNDLKRLRFRTGKIRRPNLQHPQLSCLHPKDANISAPTVCQAQEVVKNKYP 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1313g00003 209 Pfam Transcription factor regulating root and shoot growth via Pin3 138 168 IPR013591 -
Pral1313g00003 209 MobiDBLite consensus disorder prediction 10 34 - -
Pral1313g00003 209 MobiDBLite consensus disorder prediction 14 30 - -
Pral1313g00003 209 Pfam Transcription factor BRX N-terminal domain 24 60 IPR027988 -
Pral1313g00003 209 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 168 IPR044532 -
Pral1313g00003 209 ProSiteProfiles BRX domain profile. 138 209 IPR013591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1313g00003 Pral-Chr1313 23480 26252 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1313g00003 1 167 Major Intrinsic Protein MIP AT1G31880 44.134 5.65e-35 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1313g00003 - - cave:132186704 282.722