Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1313g00001 ATGTTGACCTGCATTGCGTGTTCCAAGCAGCTTAATGACAAGAGATCTCTTCCCCAACAAGATGAGCACGAAGAAGCTGTGGATACACCCAGCACCAAGCAGGCCATTAAGGCCCTCACAGCGCAGATCAAGGACATGGCGGTGAAGGCTTCTGGGGCATATAGAAATTGCAAGCCCTGTTCAGGATCTTCAAATGGTAACAGGAACCATAACTATGCTGATTCTGATATGGCTTCAGAATCAGCGAGATTTCACTGGGCGTACAAAAGGACTGGTAGCTCCAACTCAACCCCCAGGCTTTGGGGAAAGGAGATGGAGGCGAGACTGAAGGGGCTCTCTAGTGGGGAAGGAACGCCGGCGTCGGTGAGTGGCCGGACTGAGTCGGTGGTGTTCATGGAGGAGGATGAGCCCAAGGAATGGGTTGCTCAAGTAGAGCCTGGTGTGCTTATCACTTTCGTTTCGTTGCCTCAAGGTGGGAATGATCTGAAACGAATACGGTTCAGCCGGGAAATGTTTAATAAATGGCAAGCTCAGAGGTGGTGGGCTGAGAATTATGACAAGGTCATGGAGTTATACAACGTTCAAAGGTTCAATGAACAAGTAGGTCCTCTGCCAACCCCACCGAGATCCGAGGATGAGGTGAGCATTCACCATTCTGTATTTTGA 666 0.5015 MLTCIACSKQLNDKRSLPQQDEHEEAVDTPSTKQAIKALTAQIKDMAVKASGAYRNCKPCSGSSNGNRNHNYADSDMASESARFHWAYKRTGSSNSTPRLWGKEMEARLKGLSSGEGTPASVSGRTESVVFMEEDEPKEWVAQVEPGVLITFVSLPQGGNDLKRIRFSREMFNKWQAQRWWAENYDKVMELYNVQRFNEQVGPLPTPPRSEDEVSIHHSVF 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1313g00001 221 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 213 IPR044532 -
Pral1313g00001 221 Pfam Transcription factor regulating root and shoot growth via Pin3 138 192 IPR013591 -
Pral1313g00001 221 Pfam Transcription factor BRX N-terminal domain 24 60 IPR027988 -
Pral1313g00001 221 ProSiteProfiles BRX domain profile. 138 193 IPR013591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1313g00001 Pral-Chr1313 104 2685 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1313g00001 1 213 Major Intrinsic Protein MIP AT1G31880 50.224 6.69e-63 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1313g00001 - - cave:132186704 385.185