Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1310g00010 ATGGATAACTGTTGTCATCAAGTTACGTTCATTGGCCAGCCTGAGGAAAATGGAAGTCAACTTTTTTCAGAAATTCCAAAAGAGTTGAAAGATGCCGATGAACAAACTATTAAGACTGAAACTTTGTTTATACCAGTGTTTAAGAAAAGAAAGCGACTTAGCCTAAGTCAGCTTAGAGAGATAAAAGCAGGATTAGGTGAGAAGCAGACGCAAACTAGCAGCAAGCTCAAGACAAAGAAGCATGAGAGTAGAGACAGATGGTCATCTGAGAGATATAAGCTTGCTGAGCAAAGCATGTGGGAGGTCTTGAAGGCTAAAGGTGCAACATTTGCCAACCCAATCTCCCGACCTGCACTACGGACAGCTGCCCGTAAACACATTGGCGACACTGGACTATTGGACCATTTACTGAAGCACATTGATGGTAAAGTGGCACCTGGTGGGACTGAGCGTTTTAGGCGGTGGTTTAACACTAAAGGAATCATGGAATATTGGTTGGAGAGTGCTAACCTGGATAAGGTCCGCCAGGATGCTGGGGTGCAGGACCCATACTGGATTCCACCATCTACATTTAAAGCAGGCAGCCCCCCTCAGATTTCAGATTCTTCTGGCGAATTGAAACTGCTTCAAACAGAAATGGCCAAAATGAAGAAAGATATGCAGGAGCTCATAATCAAGAACCGAGAGAAAAATGAAAGTCATATGATGGAGGAGACACACAAGGAATTAGTAAAGTGGAAAGCTATGACTGAGCAACGCCTAACTGGGATTTTGACTTCTTTGAAGGGTGTACAGGGCATGTATGGTGATTTGGTGATTTGGAAAGGTAAAGTTGAGCAACAGCTTGTGGAAATAACAAATAAATTGAGTGATCTGAAAGCATCAAGGGAAGGCACGACCAATCCTCCTTTAGAAAGATGGGAAGATTGGCTTGAAAGCACCAATCTAGAGAATATTCAGGGAGATGATGAGCTTATACCATGGTTTGGGAGTACAGAGCTGATTAATCTTGAGCAAGGAGTTGCCCTGCAAGATCCTAACTCAGCCCTACCTAGTCAGCTGCTCAATGACAATGTGACTAACATGAAGAGTGAGTTGCTGGAAATGTTGCCCAACATTCAAGAGGAAGATCAACCTAATGTGACTCCAGATTCTTCTATCACTGTTAATTCAAAATCAGACCTTGACAACTCGGTGATGTTGTTTCAGGAGATGCTTACGGACTTGTTTAAATGGAAAGACAAGATGGAGAAGCAGATGGCCGAGTTATCAAATCATGTATATGGAATGCTGGCGACGAAGTAG 1305 0.4307 MDNCCHQVTFIGQPEENGSQLFSEIPKELKDADEQTIKTETLFIPVFKKRKRLSLSQLREIKAGLGEKQTQTSSKLKTKKHESRDRWSSERYKLAEQSMWEVLKAKGATFANPISRPALRTAARKHIGDTGLLDHLLKHIDGKVAPGGTERFRRWFNTKGIMEYWLESANLDKVRQDAGVQDPYWIPPSTFKAGSPPQISDSSGELKLLQTEMAKMKKDMQELIIKNREKNESHMMEETHKELVKWKAMTEQRLTGILTSLKGVQGMYGDLVIWKGKVEQQLVEITNKLSDLKASREGTTNPPLERWEDWLESTNLENIQGDDELIPWFGSTELINLEQGVALQDPNSALPSQLLNDNVTNMKSELLEMLPNIQEEDQPNVTPDSSITVNSKSDLDNSVMLFQEMLTDLFKWKDKMEKQMAELSNHVYGMLATK 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1310g00010 434 Coils Coil 275 295 - -
Pral1310g00010 434 MobiDBLite consensus disorder prediction 73 89 - -
Pral1310g00010 434 MobiDBLite consensus disorder prediction 66 89 - -
Pral1310g00010 434 PANTHER PROTEIN DYAD 5 432 IPR044221 GO:0007131|GO:0051177|GO:0051321
Pral1310g00010 434 Coils Coil 199 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1310g00010 Pral-Chr1310 52852 56695 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1310g00010 86 167 PHD Transcription Factor Family AT5G22260 42.169 2.05e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1310g00010 - - gmx:100806484 569.311