Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1310g00007 ATGGATAAGTACGAGGAGGTGAAGGATTTGGGAGCTGGCAATTTCGGGGTGGCTAGGCTCATGAGGAACAAGGAGACCAAGGAGCTCGTCGCCATGAAATATATCGAGCGTGGTGGCAAGATTGATGAGAACGTGGCGAGAGAGATTATGAACCACAGGTCCCTTCGACACCCCAATATAATCCGATTCAAGGAGGTCATTTTGACCCCCACACATTTAGCCATAGTAATGGAGTATGCAGCGGGGGGAGAACTATTTGAGAGGATATGCAATGCCGGCAGATTCAGCGAAGACGAGGCTAGATATTTCTTTCAGCAGCTGATATCTGGTGTCAATTTCTGTCACACCATGCAAATATGCCACAGAGATTTAAAACTTGAAAATACCCTTTTGGATGGAAGTCCGGCACCTCGCCTGAAAATTTGCGATTTTGGTTATTCCAAGTCATCTTTGTTGCATTCAAGACCCAAGTCTACGGTTGGAACCCCAGCTTATATAGCACCCGAAGTTCTTTCTAGGCGCGAATATGATGGCAAGTTGGCTGATGTGTGGTCATGTGGAGTGACTCTTTATGTGATGCTTGTTGGAGCATATCCCTTTGAGGACCAGGATGACCCAAGGAATTTCCGGAAAACGATCCAGCGAATAATGGCCGTTCAATACAAAATCCCAGATTATGTTCACATATCTCAAGATTGCAGGCACCTCCTCTCTCGCATTTTTGTGGCTAATCCATTGAGGGCCACTCTCATTGTGGGTTTCAGAGAATAA 771 0.4604 MDKYEEVKDLGAGNFGVARLMRNKETKELVAMKYIERGGKIDENVAREIMNHRSLRHPNIIRFKEVILTPTHLAIVMEYAAGGELFERICNAGRFSEDEARYFFQQLISGVNFCHTMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQDDPRNFRKTIQRIMAVQYKIPDYVHISQDCRHLLSRIFVANPLRATLIVGFRE 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1310g00007 256 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Pral1310g00007 256 PANTHER SERINE/THREONINE KINASE 3 246 - -
Pral1310g00007 256 PIRSF ILK 1 247 - -
Pral1310g00007 256 Pfam Protein kinase domain 4 245 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1310g00007 256 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
Pral1310g00007 256 Gene3D Transferase(Phosphotransferase) domain 1 80 249 - -
Pral1310g00007 256 FunFam Serine/threonine-protein kinase SRK2A 80 256 - -
Pral1310g00007 256 SUPERFAMILY Protein kinase-like (PK-like) 1 246 IPR011009 -
Pral1310g00007 256 SMART serkin_6 4 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1310g00007 256 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Pral1310g00007 256 FunFam Serine/threonine-protein kinase SRK2E 1 79 - -
Pral1310g00007 256 ProSiteProfiles Protein kinase domain profile. 4 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1310g00007 256 CDD STKc_SnRK2 3 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1310g00007 Pral-Chr1310 24417 27416 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1310g00007 3 246 CBL-interacting serine-threonine protein kinases AT2G26980 41.961 2.75e-62 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Pral1310g00007 Pkinase 1e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1310g00007 K14498 - gmx:547968 492.656