Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1310g00006 ATGGATAAGTACGAGGAGGTGAAGGATTTGGGAGCTGGCAATTTCGGGGTGGCTAGGCTCATGAGGAACAAGGAGACCAAGGAGCTCGTCGCCATGAAATATATCGAGCGTGGTGGCAAGATTGATGAGAACGTGGCGAGAGAGATTATGAACCACAGGTCCCTTCGACACCCCAATATAATCCGATTCAAGGAGGTCATTTTGACCCCCACACATTTAGCCATAGTAATGGAGTATGCAGCGGGGGGAGAACTATTTGAGAGGATATGCAATGCCGGCAGATTCAGCGAAGACGAGGCTAGATATTTCTTTCAGCAGCTGATATCTGGTGTCAATTTCTGTCACACCATGCAAATATGCCACAGAGATTTAAAACTTGAAAATACCCTTTTGGATGGAAGTCCGGCACCTCGCCTGAAAATTTGCGATTTTGGTTATTCCAAGTCATCTTTGTTGCATTCAAGACCCAAGTCTACGGTTGGAACCCCAGCTTATATAGCACCCGAAGTTCTTTCTAGGCGCGAATATGATGGCAAGTTGGCTGATGTGTGGTCATGTGGAGTGACTCTTTATGTGATGCTTGTTGGAGCATATCCCTTTGAGGACCAGGATGACCCAAGGAATTTCCGGAAAACGATCCAGCGAATAATGGCCGTTCAATACAAAATCCCAGATTATGTTCACATATCTCAAGATTGCAGGCACCTCCTCTCTCGCATTTTTGTGGCTAATCCATTGAGGAGAATAACAATAAAGGAAATTAAGATCCATCCATGGTTTCTGAAGAACCTACCAAGGGAGCTAACTGAGTCAGCGCAGGCTGTGTATTACCAGAGAGACAACCCAAGCTTTTATTCTCAGAGTGCGGAGGAAATAATGAGAATTGTTGGAGAGGCAAGAACCCCGCCTCCAGTATCCAGGCCTGTCAAAGGTTTTGGGTGGGAAGGCGAAGAAGAAGAGGAAGAAGAAGGAGCAGAAGAAGAGGTGGAAGAGGAGGAGGAAGATGAAGAAGAAGATGAGTACGACAAGAGGGTGAAGGAGGTTCACGCAAGCGGAGAATTTCAAGTCAGTTGA 1074 0.4628 MDKYEEVKDLGAGNFGVARLMRNKETKELVAMKYIERGGKIDENVAREIMNHRSLRHPNIIRFKEVILTPTHLAIVMEYAAGGELFERICNAGRFSEDEARYFFQQLISGVNFCHTMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQDDPRNFRKTIQRIMAVQYKIPDYVHISQDCRHLLSRIFVANPLRRITIKEIKIHPWFLKNLPRELTESAQAVYYQRDNPSFYSQSAEEIMRIVGEARTPPPVSRPVKGFGWEGEEEEEEEGAEEEVEEEEEDEEEDEYDKRVKEVHASGEFQVS 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1310g00006 357 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Pral1310g00006 357 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
Pral1310g00006 357 SMART serkin_6 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1310g00006 357 ProSiteProfiles Protein kinase domain profile. 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1310g00006 357 Gene3D Transferase(Phosphotransferase) domain 1 80 268 - -
Pral1310g00006 357 MobiDBLite consensus disorder prediction 303 357 - -
Pral1310g00006 357 FunFam Serine/threonine-protein kinase SRK2A 80 268 - -
Pral1310g00006 357 SUPERFAMILY Protein kinase-like (PK-like) 2 305 IPR011009 -
Pral1310g00006 357 Pfam Protein kinase domain 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1310g00006 357 FunFam Serine/threonine-protein kinase SRK2E 1 79 - -
Pral1310g00006 357 CDD STKc_SnRK2 3 259 - -
Pral1310g00006 357 PANTHER SERINE/THREONINE KINASE 3 318 - -
Pral1310g00006 357 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Pral1310g00006 357 MobiDBLite consensus disorder prediction 315 341 - -
Pral1310g00006 357 Coils Coil 315 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1310g00006 Pral-Chr1310 23903 27415 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1310g00006 3 282 CBL-interacting serine-threonine protein kinases AT4G24400 41.497 2.11e-67 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Pral1310g00006 Pkinase 6e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1310g00006 K14498 - gmx:547968 638.262