Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1308g00007 ATGGCGCAAGGAGCAGGATCTTCTTCCGTCACCCGCAGATGGAGTTATGATGTGTTTTTAAGCTTTCGGGGGGAAGATACTCGCCTGACTTTCGTCGGTCATCTCTATGAGTCTCTTCGTCAAAGAGGGATTCGGACCTTCATTGATGATGAATCCCTTGATGCAGGCAAAGAAATCCGACCATCTCTTTCTGAAGCCATCAAGGAATCCAGGATGGCTATCATACTTTTCTCCCAAAACTATGCAACCTCAACCTTCTGTCTGGATGAACTTGTCCAGATTATTGAGTGTTTCAAAGAAGAAAGTCGGATGGTATATTCAGTGTTTTATCATGTGGATCCATCAGATGTGCGACATCAGAGAGGGCGTTATGGACAAGCTTTGGCTGATCTGCAGAACAGATTGGAGGGAAAGGATGTGAAGTTGCAAAAGTGGAGGTGGGCTTTGACTCAAGCAGCTGACTTGTCAGGCTGGCATTTTCAACCTGGGATTACAAAAGAACAGGAGCATATTAAGATGATTACTCGTGAAGTCTCTGCCAAGATTAATCACACTCTTTTAGAAGTTGTGGATTATCCAGTTGGCCTTGAGTTTCGGGGGAAAGAAGTAATCTCACTTCTAGATCTTGGGTCCAACAAAAACCCACTGATGATTGGAATTTGTGGCATTGGTGGGATAGGTAAATCGACAATTGCAAGAGCCGTGTATAACTCAGTTGCTGATAATTTTGATGGTTTGTGTTTTCTTTCTAATGTTAGAGAAATTTCTTACAAGCATGGCTTGTCACATCTTCAAGAGACATTACTTCATAAATTGGTGAGGGTGAAGGAACTCAAATTGGGTGATTTCTATGAAGGAATTTCAATAATAAAGAATAGGCTCCAAAACAAGAAGATTCTTTTAATTCTTGATGATGTTGACAAAGTGGAGCAATTACGAGCATTAGCTGGAAGCTGTGAATGGTTTGGCCTAGGAAGCAGAATCATTATCACGACAAGGGATAAACAGTTGCTAGCAAGTCGGGGAATTCAAAGAATTTATGATGTCAAGGGGTTAAGTGATGATGAATCTCTTCGGTTAATTAAAAGGCATGGCTTTAAAGGGCTTACGGGGGATTTAGATCATTACATGGATGTTCTGAATCGTGCCATAAAATATTCATGTGGCCTTCCATTAGCCTTGGAAATGATTGGCTCTAACTTGTGTGATAAAAGAGTTGATGAATGGACTTCTGCATTAGATGAATATGAAAGAATACCTGATAAAGACGTTTTTAAAGTCCTTAAATTAAGCTATGATGCTTTAAGCAGAGAACAGCATAAGGAAATTTTTCTTGACTTGGCCTGTTTCTTTAATGGTGAGAAGTTGGGAGACGTCATAAATATGATGATGAGTTTTCGTGGTGTTGAACCAACACATGCCATTAATGTGTTGACAGATAAATCTCTAATAAAGATTAAAGAAGATCGTGTGATAATGCATGACTTGATTGAAGATATGGGTAAGGAAATTGTTCGGCAACAATCACGAAAAGAGCCTGGGAAACGCAACAGGTTATGGTGTTATGAAGACATTATTGATGTGTTGCAAAATAACACGGGCACTGATGAAGTTGAAGTCATGATTCTTGACTCACCCAAAGATAAAGAAATCCAATGGAATGGCAAGGCATTCATGAAAATGAAGAAGCTCAAAGTGCTTGTCATAAAGAATGCAAGCTTTTCTAAAGGCATCAAATATCTCCCAAATAGTCTCTGCGTGTTAGAATGGAAGGGGTACCCTTTTGAGTTTTTGCCATCTAATTTTCATCCAAAAAAACTCGTCCATCTTGATTTGTCCAATAGTTGTGTGGTGCTCCTACCTTTTAATAAGAAATTGGAGAGTTTAAGTTGCATGAATTTTAGCAACTGTAAATCCTTGAGCCAATTACCAAACCTGTCGGGAGTTCCTAATTTAACAGAATTGTGGCTTGATGGTTGTACAAACTTAATTGAAATCCATGATTCCCTTGGATTCTTGGGTAAACTCAAAAGATTGAGTGCTATGCGATGCAAAAACTTGAGGACTTTGCCTCCTAGTATTAAGCTAATATCACTTGAAGATCTAAATCTCTTTCGTTGTTCAAGTCTTCAAAGTTTTCCTGAGATATTAGACAAGATGGAGAAGTTGAAGGCACTTGATTTGGAGAGTACGGGCATTGCAATACTGCCATCTTCAATCTGCAACCTCGTTGGGCTTGAAACCTTAAACATGGAGGCGTGCCCTAATCTTAAGCAATTACCAGCTAGTATTTGTAAGTTGCCAAAACTATTGGAACTATCAACAAATTTTTGTGAAGGGATGAAGCATTTCAGGAAATGCGAAGGTGAAAAAGAAGCAAGCTTAGACAGCGCAACCATTTCGACCAAAGAGATAGAGAAAGAATGCAACTTAGCCTTGTCTTCAAGAAGACATTTCTGTTTCTCAAATTGCAACTTAACAAATGACTCTCTTGCTCTTTGTGTCTCTCGTATTCCTGACGTTGTACAGTTAGATTTAAGGTTTAATAGTTTCACAACTCTCCCAGCATGCATAGAAGAATGTGAGAATTTAAGGTATCTTTTCTTGGATCATTGTGTGCAATTGCAAAAAATTGTGAGGATGCCACCAAAATTGGAAGCATTCAGGGCCATAGGTTGCACTTCTTTGTCTAAGTCATCCAAAAAAAGAGTATTGGATCAGGCATTCTACTTTGGAAATGGGAAAAGAAACTTTATCTTGCCAGGAAAAAGAATCCCTCAATGGCTTGACTATTATAGTCGAGGAAGCTCCGTGTCTTTTTGGATTCGTGATAAGGTCCCAAAATTTGCTCTTTGGTTTCTTTTTGAAAATGACCCAGTTGGTCCTTACAAATGTGTATTCTCAATGCACATCAATGATACCAAGTTACATATTTCTTCTGGGTGGCTTTCAAAATCAGTTATACTGGCCAATCATATATACATATGTGATATGGAAAGCATAATTGAGAAGGTTAGACCCCGTCTTGCAAATGGATGGAATCATGTGAGGGTTTCAATCAAGAGCAAAGCACGAAAGATAAAAATGGAAAAAGAAATTTCTATAGCAGTTCATGTATACAGGCAACAAAATGACTTGGAAAATATTCGATTCAAGGACACTAGAATACACCTTGATTGCAACTCGTGGCAAAAGAAACAACCACCACCTCAAGATTGGGGAGAGCTCGAAGATGAAATCAATGAGGATTCAAATTCAACAAAATTTGCAGAGTCAATCCAAAAAATCACGCCTTATCAAGAACCCATGAGTGCTGACCTTGTGAGTGGAGCGTTTGATTGGCTGGCGCAAGGAGCAGGAACTTCTTCTATCGCCTGCATGCAAGGAGCAAGAGCCGTCTTCAGCTTGTGGGCAGATCCCCGCTCCTATTTCAGGGGTGATCTCTACCCATTTCTTAGTGGAGGCGTGATTCGTCTCTTCGTTCCTGACATCCTCAACTCAGACGAAGAAACCCAACTATTATGA 3525 0.3957 MAQGAGSSSVTRRWSYDVFLSFRGEDTRLTFVGHLYESLRQRGIRTFIDDESLDAGKEIRPSLSEAIKESRMAIILFSQNYATSTFCLDELVQIIECFKEESRMVYSVFYHVDPSDVRHQRGRYGQALADLQNRLEGKDVKLQKWRWALTQAADLSGWHFQPGITKEQEHIKMITREVSAKINHTLLEVVDYPVGLEFRGKEVISLLDLGSNKNPLMIGICGIGGIGKSTIARAVYNSVADNFDGLCFLSNVREISYKHGLSHLQETLLHKLVRVKELKLGDFYEGISIIKNRLQNKKILLILDDVDKVEQLRALAGSCEWFGLGSRIIITTRDKQLLASRGIQRIYDVKGLSDDESLRLIKRHGFKGLTGDLDHYMDVLNRAIKYSCGLPLALEMIGSNLCDKRVDEWTSALDEYERIPDKDVFKVLKLSYDALSREQHKEIFLDLACFFNGEKLGDVINMMMSFRGVEPTHAINVLTDKSLIKIKEDRVIMHDLIEDMGKEIVRQQSRKEPGKRNRLWCYEDIIDVLQNNTGTDEVEVMILDSPKDKEIQWNGKAFMKMKKLKVLVIKNASFSKGIKYLPNSLCVLEWKGYPFEFLPSNFHPKKLVHLDLSNSCVVLLPFNKKLESLSCMNFSNCKSLSQLPNLSGVPNLTELWLDGCTNLIEIHDSLGFLGKLKRLSAMRCKNLRTLPPSIKLISLEDLNLFRCSSLQSFPEILDKMEKLKALDLESTGIAILPSSICNLVGLETLNMEACPNLKQLPASICKLPKLLELSTNFCEGMKHFRKCEGEKEASLDSATISTKEIEKECNLALSSRRHFCFSNCNLTNDSLALCVSRIPDVVQLDLRFNSFTTLPACIEECENLRYLFLDHCVQLQKIVRMPPKLEAFRAIGCTSLSKSSKKRVLDQAFYFGNGKRNFILPGKRIPQWLDYYSRGSSVSFWIRDKVPKFALWFLFENDPVGPYKCVFSMHINDTKLHISSGWLSKSVILANHIYICDMESIIEKVRPRLANGWNHVRVSIKSKARKIKMEKEISIAVHVYRQQNDLENIRFKDTRIHLDCNSWQKKQPPPQDWGELEDEINEDSNSTKFAESIQKITPYQEPMSADLVSGAFDWLAQGAGTSSIACMQGARAVFSLWADPRSYFRGDLYPFLSGGVIRLFVPDILNSDEETQLL 1174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1308g00007 1174 ProSiteProfiles TIR domain profile. 14 182 IPR000157 GO:0007165
Pral1308g00007 1174 Gene3D - 182 344 IPR027417 -
Pral1308g00007 1174 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 158 IPR035897 -
Pral1308g00007 1174 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 791 IPR044974 GO:0006952
Pral1308g00007 1174 Gene3D - 351 436 IPR042197 -
Pral1308g00007 1174 SMART AAA_5 214 352 IPR003593 GO:0016887
Pral1308g00007 1174 FunFam Disease resistance protein (TIR-NBS-LRR class) 12 184 - -
Pral1308g00007 1174 Pfam TIR domain 16 184 IPR000157 GO:0007165
Pral1308g00007 1174 Gene3D - 8 181 IPR035897 -
Pral1308g00007 1174 SUPERFAMILY L domain-like 541 895 - -
Pral1308g00007 1174 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 180 447 IPR027417 -
Pral1308g00007 1174 Gene3D Ribonuclease Inhibitor 712 906 IPR032675 -
Pral1308g00007 1174 PRINTS Disease resistance protein signature 387 401 - -
Pral1308g00007 1174 PRINTS Disease resistance protein signature 293 307 - -
Pral1308g00007 1174 PRINTS Disease resistance protein signature 217 232 - -
Pral1308g00007 1174 PRINTS Disease resistance protein signature 624 640 - -
Pral1308g00007 1174 SMART till_3 15 155 IPR000157 GO:0007165
Pral1308g00007 1174 Pfam NB-ARC domain 203 420 IPR002182 GO:0043531
Pral1308g00007 1174 Gene3D Ribonuclease Inhibitor 484 711 IPR032675 -
Pral1308g00007 1174 SUPERFAMILY "Winged helix" DNA-binding domain 423 530 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1308g00007 Pral-Chr1308 145685 152034 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1308g00007 16 784 WRKY Transcription Factor Family AT4G12020 31.368 4.90e-83 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1308g00007 - - pcin:129295352 1226.85