Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1308g00001 ATGGCGCAAGGAACAGGATCTTCTTCCGTCACCCGCAGATGGAGCTATGATGTGTTTCTTAGCTTTCGGGGGAAAGATACTCGCCTGACTTTCGTCGGTCATCTCTATGAGGCTCTTCGTCAAAGAGGGATTCGGACGTTCATTGATGATGAATCCCTTGATGCAGGCAAAGAAATCCGACCATCTCTTTTTGAAGCCATCAAGGAATCCAGGATAGCCATCATAATTTTCTCCCAAAATTATGCAACCTCAACTTTTTGTCTGGATGAACTTGTCCAGATTATTGAGTGTTTCAAAGAAGAAAGTCGGATGGTATATTCAGTGTTTTATCATGTGGATCCATCGGATGTGCGACATCAGAGAGGGAATTACGGACAAGCTTTGGCTGATCTACAAAAGAGATTGGAAGGAAACGATGAGAAGTTGCAGAAGTGGAGGTGGGCTTTGTCCCAAGCAGCTGACTTGTCAGGCTGGCATTTTCAACCTGGAATTACAAAAGAACAGGAGCATATTAAGATGATTACTCGCAAAGTCTCTGCCAAGGTTAATCGCACTCATTTAAATGTTACCAATTATCCAGTTGGTCTTGGGTTACGAGTGCAAGAAGTAATCTCACTTTTAAATCTTTGGTCCAATGAAGAAGCGGAGATGGTTGGAATTTGTGGCATTGGTGGAATAGGTAAATCAACAATAGCAAGGGCTGTGTATAATTCAGTTGCTGATAATTTTGATGGTTTATGTTTTCTTTCTAATGTTAGAGAAATTTCTAACAAGCATGGCTTGCCCCACCTTCAAGAGATGTTACTCTATAAATTGGTGGGGGAGAAGAAACTCAGATTGGGTGATTTCAATGAAGGAATTCCAATAATAAAAAATAGGCTCCAAAACAAGAAGATTCTTTTAATTCTTGATGACGTTGATGAAGTGGAGCAATTATGGGCATTAGCTGGAAGCTGTGAGTGGTTTGGCCTTGGAAGTAGAATTATTATCACGACAAGGGATAAACAATTACTAGCAAGTCTTGGAATTCAAAAAATTTATTATGTCGAGGTACTAAATGCTGATGACTCTCTTCAGTTAATTGAAAGGCATGCCTTTAAAAACCTTACGGGGGATATAGATCATTACAAGGATGTTTTGAATCGTGCCATAAAATATTCAGGTGGCCTTCCATTAGCCTTGATAATGATTGGCTCTAACTTATGTGATAAAAAACCTGATGATTGGACTTCTGCATTAAATGTTTATGAAAGAATACCTAGTAAAAATATTTTTGAAGTCCTTAAAGTAAGCTATGATGCTTTAAGCGAAGAAGAAGACAAGGAAATTTTTCTTGACTTGGCTTGTTTCTTTAATGGTGAGAAGAAGGACGACGTCATGAATATGATGATGAGTTTTCGTGGTGGTGAACCAACACATGCTATTAACGTGTTGACGGATAAATCTCTAATAAAGATAGAAAAAGATCGTGTGACAATGCATGACTTGATTGAAGATATGGGTAAAGAAATTGTTCGGCAACAATCACGACAAGAGCCCGGTAAACGCAACAGGTTATGGTGTTATGAAGACATTCTTGATGTCCTGCAAAATAACACAGGTACTGATGAAACTGAAGTCATAATTCTTGACTTACCCAAAGATAAAGAAATCCACTGGAATGGTGAGGCATTCATGAAGATGAAGAAGCTCAAAGTGCTTGTCATAAAGAATGCAAGCTTTTCTGAAGGCATCAAATATCTCCCAAATAGTCTCTGCGTGTTGGAATGGAAGGGGTACCCTTTTAAGTTTTTTCCATCTGATTTTCATCCAACAAAACTCGTCCATCTTGATTTGTCCAATAGTTGTGTAGTGCTCCAACCTTTGAATAAGAAATTGGAGAGTTTAAGTCGCATGAATTTTAGCAACTGTAAATCCCTGAGCCAAATACCAAAAATGTCAGGAGTTCCTAATTTAAGAGAATTGCGGCTTGATGGTTGTACAAACTTAATTGAAATCCACGATTCACTTGGATTCTTGGATAAACTTGAAAAGCTGAGTGCTATGCGATGCAAAAGCTTGAGGACTTTGCCCCCTATTGTTAAGCTGATAGCGCTTGAACATCTAAATCTCTTTGGTTGTTCAAGTCTTCAAAGTTTTCCGGAGATATCAGAAGAGATGAAGAATTTGAAGACACTTGATTTGGAGAGTACGGCAATTGCAAGATTGCCATCTTCAATCTGCAACCTTGTTGGGCTTGAAAGCTTAAACATGGAAGCGTGTCCTAATCTTGAGCAATTACCAGCTAGTATTTGTACGTTGCCAAACCTATTGGACCTAACAACAAGTTTTTGTGAAGAGATGAAGCATTTTAAGAAATGCAATGGTGGAAAAGAAGCAAGCTCAGACTGCTCAATCATTTTAACCAAAGGAAAAGAAAAAGAAGACAACTCAACCGTGTCTTCGAGAAAATATTTCCGTTTCTCAAATTGCAACTTAACAAATGGCTCTCTTGCTCTCTGTCTCTCTTGTATTCCTGACATTAAAATTGATAGGATGCCCCCAAAATTGGAAACATTCAGTGCCATGGGTTGCACGTCTTTGTCTAAGTCATCAAGGAAAAGAGTACTGAATCAGGCATTCTACTTTGGAAATGGGAAAAGAAACTTTATTTTGCCTGGAAAAAGATTCCCTCAATGGCTTGACTATTATAGTCGAGGAAGCTCCATGTCTTTTTGGATTCGTGAAAGGTTCCCAAAAATTGCTCTTTGGTTGCTTGTTGAAAATGACCAAGTTGATCCTTACAAATGTGCATTCTCAGTGCACATCAATGACACCAAGTTAGATATTTCTTCTGAGTGGCTTTCACTATCAATTATACTGGCCAATCATATATACATATGTGACATGGGAAGCATAATTAAGAAGGTTGAACTCCCTCTTGCAAATAGATGGAATCATGTGAAGGTTTCAATCAAGAGCAATGCAGGAGAAATAAAGTTGGAAAAGGAAATTTCTATGGCAGTTCATGTGTATAAGCAACAAAATGACTTGGAAGATATCCGATTCAGGGACCCGAGAACACACCTCGATTGCAACGCATGGCAAAAAGTACAACAACCACCTCAAGATCAGGAAGAGCTTGAAGATGAAATGAATGAGGATTCAAATTCAACCAAAGTCGCAGAAGCAGAACCCATGACTACTAACCTTATGGGTGGAACATTTGATTGGCTGGTGCAAGGAGCAAAAACCTCTTCTGTCGCCCGCATGTGGACTTTTGATGTGTATGTTAGCTTTCGAGGTGCAGATACTCGCTTTGGTTTCATTGCTCATCTTTACGAATCTCTTCGTCAAAGCGGGATTCGTCCCTTCATTGATGACAAATACCTCCCCGCAAGTGAAGAAATCCAACCATCTCTTTCCAAAGCCATCAAGGAATCTAGGATGGCCATAATAGTTTTCTCCAAAACCTATGCAGCCTCAACCACCTGTCTGGATGAACTTGCCCAGATTATTGAGTATTTCAAAGAAGAAAATCGGCGGGTATATTCAGTGTTTTATGATGTGGATCCATCAGAGGTGCGGCATCAGACAGGGCGCTATGGACAAGATCTTGCTAATTTGCAAAACAGATTGGGAATAAATGATGAGAGGTTACAGAAATGGAGGAGGGCTTTGTCTCAAGCAGCTGATTTATCAGGCTGGCGTTATCAACCTGGGTCAAGAAAGAGTACAATAGAAAATCCTATGCTGGAGAATTAA 3744 0.3948 MAQGTGSSSVTRRWSYDVFLSFRGKDTRLTFVGHLYEALRQRGIRTFIDDESLDAGKEIRPSLFEAIKESRIAIIIFSQNYATSTFCLDELVQIIECFKEESRMVYSVFYHVDPSDVRHQRGNYGQALADLQKRLEGNDEKLQKWRWALSQAADLSGWHFQPGITKEQEHIKMITRKVSAKVNRTHLNVTNYPVGLGLRVQEVISLLNLWSNEEAEMVGICGIGGIGKSTIARAVYNSVADNFDGLCFLSNVREISNKHGLPHLQEMLLYKLVGEKKLRLGDFNEGIPIIKNRLQNKKILLILDDVDEVEQLWALAGSCEWFGLGSRIIITTRDKQLLASLGIQKIYYVEVLNADDSLQLIERHAFKNLTGDIDHYKDVLNRAIKYSGGLPLALIMIGSNLCDKKPDDWTSALNVYERIPSKNIFEVLKVSYDALSEEEDKEIFLDLACFFNGEKKDDVMNMMMSFRGGEPTHAINVLTDKSLIKIEKDRVTMHDLIEDMGKEIVRQQSRQEPGKRNRLWCYEDILDVLQNNTGTDETEVIILDLPKDKEIHWNGEAFMKMKKLKVLVIKNASFSEGIKYLPNSLCVLEWKGYPFKFFPSDFHPTKLVHLDLSNSCVVLQPLNKKLESLSRMNFSNCKSLSQIPKMSGVPNLRELRLDGCTNLIEIHDSLGFLDKLEKLSAMRCKSLRTLPPIVKLIALEHLNLFGCSSLQSFPEISEEMKNLKTLDLESTAIARLPSSICNLVGLESLNMEACPNLEQLPASICTLPNLLDLTTSFCEEMKHFKKCNGGKEASSDCSIILTKGKEKEDNSTVSSRKYFRFSNCNLTNGSLALCLSCIPDIKIDRMPPKLETFSAMGCTSLSKSSRKRVLNQAFYFGNGKRNFILPGKRFPQWLDYYSRGSSMSFWIRERFPKIALWLLVENDQVDPYKCAFSVHINDTKLDISSEWLSLSIILANHIYICDMGSIIKKVELPLANRWNHVKVSIKSNAGEIKLEKEISMAVHVYKQQNDLEDIRFRDPRTHLDCNAWQKVQQPPQDQEELEDEMNEDSNSTKVAEAEPMTTNLMGGTFDWLVQGAKTSSVARMWTFDVYVSFRGADTRFGFIAHLYESLRQSGIRPFIDDKYLPASEEIQPSLSKAIKESRMAIIVFSKTYAASTTCLDELAQIIEYFKEENRRVYSVFYDVDPSEVRHQTGRYGQDLANLQNRLGINDERLQKWRRALSQAADLSGWRYQPGSRKSTIENPMLEN 1247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1308g00001 1247 ProSiteProfiles TIR domain profile. 1085 1224 IPR000157 GO:0007165
Pral1308g00001 1247 Coils Coil 1038 1058 - -
Pral1308g00001 1247 Gene3D - 12 179 IPR035897 -
Pral1308g00001 1247 Pfam NB-ARC domain 209 431 IPR002182 GO:0043531
Pral1308g00001 1247 SUPERFAMILY "Winged helix" DNA-binding domain 423 530 IPR036390 -
Pral1308g00001 1247 Gene3D - 351 436 IPR042197 -
Pral1308g00001 1247 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 181 447 IPR027417 -
Pral1308g00001 1247 SUPERFAMILY L domain-like 538 863 - -
Pral1308g00001 1247 FunFam Disease resistance protein (TIR-NBS-LRR class) 12 184 - -
Pral1308g00001 1247 SUPERFAMILY Toll/Interleukin receptor TIR domain 1083 1229 IPR035897 -
Pral1308g00001 1247 Gene3D - 180 345 IPR027417 -
Pral1308g00001 1247 Pfam TIR domain 1087 1222 IPR000157 GO:0007165
Pral1308g00001 1247 Pfam TIR domain 16 185 IPR000157 GO:0007165
Pral1308g00001 1247 ProSiteProfiles TIR domain profile. 14 182 IPR000157 GO:0007165
Pral1308g00001 1247 SMART till_3 1086 1226 IPR000157 GO:0007165
Pral1308g00001 1247 SMART till_3 15 155 IPR000157 GO:0007165
Pral1308g00001 1247 FunFam Disease resistance protein (TIR-NBS-LRR class) 1083 1246 - -
Pral1308g00001 1247 Gene3D - 1080 1245 IPR035897 -
Pral1308g00001 1247 Gene3D Ribonuclease Inhibitor 696 872 IPR032675 -
Pral1308g00001 1247 Gene3D Ribonuclease Inhibitor 540 695 IPR032675 -
Pral1308g00001 1247 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 788 IPR044974 GO:0006952
Pral1308g00001 1247 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 158 IPR035897 -
Pral1308g00001 1247 PRINTS Disease resistance protein signature 293 307 - -
Pral1308g00001 1247 PRINTS Disease resistance protein signature 217 232 - -
Pral1308g00001 1247 PRINTS Disease resistance protein signature 387 401 - -
Pral1308g00001 1247 PRINTS Disease resistance protein signature 718 734 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1308g00001 Pral-Chr1308 26978 37309 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1308g00001 16 784 WRKY Transcription Factor Family AT4G12020 32.030 1.29e-91 324
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1308g00001 - - pcin:129295352 1166.37