Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1301g00010 ATGGAGCCCAGATCAACAAGAGGCTCTGATCTTCCCCCAGGCTTTAGATTCCACCCCACCGACGAGGAATTAATCGTCCATTACCTTTGTAACCAAGCCACCTCCAAGCCTTGCCCTGCTTCTATCATCCCTGAAGTTGATATCTACAAGTTTGATCCCTGGCAATTACCTGAGAAGGCAGTGTTTGGGGAGAATGAGTGGTATTTCTTTACCCCGAGAGATAGGAAGTACCCAAATGGGGTGAGGCCAAACAGGGCCACTGTGTCTGGGTACTGGAAGGCCACTGGCACAGACAAAGCAATTTACAGTGGGGCCAAGCACATTGGGGTGAAGAAAGCTCTGGTCTTTTACAAAGGTAGGCCACCAAAAGGTGTCAAGTGCGATTGGATCATGCATGAGTATCGTCTCATTGGTTCGCCAAGACGATCCAACAAGCATATTGGTTCCATGAGATTGGATGACTGGGTGCTGTGTAGGATTTACAAGAAGAAGAACATGGCAAAATCAATGGACCTAAAGGAGGAAATGGAGGAAGAATACCCAAGTTCTGAAACGAACATGTCAGAAGAAAATGATAAGATCAATGTTGGCACTGAGCAACAAATGGTGAAATTCCCGAGGAATTGTTCTCTGACTCATCTTCTGGAAATGGATAGTTACTTGGCTCCAATCTCTCACCTTTTATCCGATTCTTCCTACAACTCAACCTTTGATTATCAGATCAATACTGCTTATAATAATGCTGGGAATATAATAGACCCATTTGTAAAACCTCAAGTCTTTGAGGTCCCAGATCAGTACTATGCAACATCATCATCAACCAGCCAGTACTTGTGA 837 0.4456 MEPRSTRGSDLPPGFRFHPTDEELIVHYLCNQATSKPCPASIIPEVDIYKFDPWQLPEKAVFGENEWYFFTPRDRKYPNGVRPNRATVSGYWKATGTDKAIYSGAKHIGVKKALVFYKGRPPKGVKCDWIMHEYRLIGSPRRSNKHIGSMRLDDWVLCRIYKKKNMAKSMDLKEEMEEEYPSSETNMSEENDKINVGTEQQMVKFPRNCSLTHLLEMDSYLAPISHLLSDSSYNSTFDYQINTAYNNAGNIIDPFVKPQVFEVPDQYYATSSSTSQYL 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1301g00010 278 Gene3D NAC domain 20 168 IPR036093 GO:0003677|GO:0006355
Pral1301g00010 278 PANTHER NAC TRANSCRIPTION FACTOR 56 11 195 - -
Pral1301g00010 278 Pfam No apical meristem (NAM) protein 12 136 IPR003441 GO:0003677|GO:0006355
Pral1301g00010 278 SUPERFAMILY NAC domain 6 163 IPR036093 GO:0003677|GO:0006355
Pral1301g00010 278 ProSiteProfiles NAC domain profile. 11 163 IPR003441 GO:0003677|GO:0006355
Pral1301g00010 278 Coils Coil 173 193 - -
Pral1301g00010 278 FunFam NAC transcription factor 20 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1301g00010 Pral-Chr1301 461744 463169 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1301g00010 6 234 NAC Transcription Factor Family AT1G69490 66.094 1.64e-109 316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral1301g00010 NAM 2e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1301g00010 - - pcin:129322687 471.085