Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1295g00015 ATGGCTGGTGCTTCTACTCCTACCATACCGTCTCACATGAAAGCCTGGGTCTATTCTGAATATGGTAAATCATCTGATGTTCTCCGCCTTGACCCTAATTTTCCTTTACCCCACGTCAAGGACGATGAGGTTCTCCTCAGAGTCGCCGCCGCTTCCCTTAATCCCGCTGATTACAAGAGAATGGCTGGCGTTTTCAAGGACACTGACTCTCCTTTACCTTGTGTTCCTGGATATGATGTTGCTGGTGTGGTGGTAAAGGTGGGAAGTGAAGTGAAGAAATTTAAGGTTGGGGATGAAGTATATGGTGACATTAATGAGAAAGCTTTGGATCACCCAAAGGTGGTTGGATCTCTGGCCGAGTATACCGCTGTAGAAGAGAAAGTGTTGGCCCACAAACCTCCAAATCTGAGCTTTCCTGAGGCTGCTGCCTTTCCTTTAGCCATGGAGACTGCTTATGAAGGGCTCGAGCGTGCTGGCTTTTCTGCCGGGAAATCCATCCTTGTTCTGGGAGGTGCTGGCGGAGTTGGAACCTTTGTTATCCAGCTCGCCAAGCACGTTTATGGTGCGTCGAAAATAGCAGCGACTTCTAGCACTGGAAAATTGGAGTTGTTGAGGAACTTGGGTGCTGATTTGCGTATTGACTACACAAAGGACAAATATGAGGATCTACCAGAAAAGTTTGATGTCGTTTATGATACAGTAGGAGAGCCTGAACGAGCATTGAAGGCTATTAAGGAAGGAGGCAAAGTGGTAGCAATAGTACCTCCTGCAAATCCACCGGCAATCATGTTTATACTGACTTCAGATGGGTTTAAGTTAGAAAAGTTAAGACCTCACGTTGAGAATGGCAAGGTGAAGTCCATACTGGATCCTAGGAGTCCGTTTCCATTTTCCCAGACAAAGGAAGCATTTGCCTACCTAGAAACTAATAGAGCCACAGGAAAAGTAGTGGTCTACCCTATCCCCTGA 969 0.4665 MAGASTPTIPSHMKAWVYSEYGKSSDVLRLDPNFPLPHVKDDEVLLRVAAASLNPADYKRMAGVFKDTDSPLPCVPGYDVAGVVVKVGSEVKKFKVGDEVYGDINEKALDHPKVVGSLAEYTAVEEKVLAHKPPNLSFPEAAAFPLAMETAYEGLERAGFSAGKSILVLGGAGGVGTFVIQLAKHVYGASKIAATSSTGKLELLRNLGADLRIDYTKDKYEDLPEKFDVVYDTVGEPERALKAIKEGGKVVAIVPPANPPAIMFILTSDGFKLEKLRPHVENGKVKSILDPRSPFPFSQTKEAFAYLETNRATGKVVVYPIP 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1295g00015 322 ProSitePatterns Quinone oxidoreductase / zeta-crystallin signature. 163 184 IPR002364 GO:0008270|GO:0016491
Pral1295g00015 322 SUPERFAMILY GroES-like 10 170 IPR011032 -
Pral1295g00015 322 CDD MDR_like_2 13 318 - -
Pral1295g00015 322 Gene3D - 20 318 - -
Pral1295g00015 322 Gene3D - 155 269 - -
Pral1295g00015 322 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 1 322 IPR044626 GO:0016628
Pral1295g00015 322 Pfam Alcohol dehydrogenase GroES-like domain 42 103 IPR013154 -
Pral1295g00015 322 SMART PKS_ER_names_mod 23 318 IPR020843 GO:0016491
Pral1295g00015 322 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 136 260 IPR036291 -
Pral1295g00015 322 Pfam Zinc-binding dehydrogenase 207 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1295g00015 Pral-Chr1295 80947 82772 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1295g00015 73 259 Monolignol Biosynthesis Gene Families AT4G37980 26.728 5.37e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1295g00015 K18980 - gmx:100817947 457.603