Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1293g00006 ATGGCGGAGGTGGGAGTGTCGATAGCAGCAAAACTTGCTGAATATCTATTGGATCCAACTTTACAGCAACTGCAATATTTGTTCTGTGTCGGCAAAATCACCAGAAATGTTGAGATCAGAAAGGAGGAGCTGATACTCAAGCAACGAAGGGTACAGGAACTTGTTCAAGAGGCCATCAACAGGACTGAGAGGATTGATGATGAGGTTGACAAGTGGAAGAATGATGTAGAGAGTCTCATAGCAGAGGTGGAGAAATTGGAGGAGGAACTAAGGGCCAACAATGGCTGTCATCGACGATGGTATCCTACTTGGAGGAGATATTGTCTCTGCAAAAAGCTGGCTAAGACAACCCAAAGGATGATTGATCTAAACACAAAGAGTGATCGCTTCAATCCATTTTCTCATCCTGTTATTATTCCAGGTATAGAGTATCACTCTTCTAAAGGTTTTATGTTCTTTGAGTCAACAAAAAAAGCACATGATGAACTATGGGCAGCATTGCAAGATGATGATAGCTCTATGATCGGGTTGTGGGGGATGGGCGGTTCAGGCAAAACTACATTGGTAAAGGAAGTAGGAAAGAAAGTCAAAGAATCAAAGCTATGTGATGAAGTTATAATTGCAACAGTTTCCCAAACTCCAAATATTAGGAAGATTCAAGGTGAAATTGCGGACTTATTGGGACTCAAATTGGAGGAAGAAACTGAAGTGGGAAGGGCAAGAAAAATTGCATTGAAATTACAGAGTTCAAACAAACGAATTTTGATTATATTAGATGATGTATGGGATACGCTGAACCTTGAGGATATAGGGAATCCCTATAGGGATGAAGGTCCAAGAAACTGTAAAATTCTTCTCACCACACGTCGTCAAGAGGTGTGTACTATGATGGATTGCCAGAAAACAATTTCCTTGGGTTTGTTAACAGAAGGTGAAGCTTGGGATCTATTTCAAACCCATGGTAAAGTAGATGATGGTGTTAGAAAAGTGGCTCAAGAAGTTGTCGCTGAATGTAAGGGACTACCCATTGCAATTGTAGCCATGGGGAAGTGCTTAAGAAGAAAAGGACTTGATGAGATGAATGTAGTATTGCACAGGTTAAGACATTCAAAGCCACTTGATGAGGATAAAGCTTTTACTTGTCTAAAGTTAAGCTATGATTACTTGAGAACTGTAGAGGCCAAGTTGTTATTCTTGGCATGTGCCATGTTTCCTGAAGATCATGAAATCAAAATTGAAGATCTTTTTAGATATGGAGTTGGATTGGGTCTATGCAAAGATGCTGACTCATTTGAAATAGCAAGGAGCCAAGTTAGAGCAGCTATAAATGTTCTTATTGACTCTTCATTGTTGATGTTTTCTGTCAACTTCGGGAAAGAAAAATATGTGAAAATGCATGACATGGTTCGTGATGTAGCTTTATGGGTAGCAACTCAAGAGAATAGTACCATTATGGTAAACAATGCAAAAGAATGGAATAACTTGATTGCTGATGAAGTTATAAAAGATTGCTATGCTATATCTTCATGGTATGATAATAGTAGATTATTTCAATCTTTGTCTCAACTGGATGCTCCCCAACTTGAGTTTCTGTTGTTACATTCGATGAAACTCTTTGACGTAGTACATGCATCATTTGAACGCACTACAGGACTCAAGGCATTGATTATTACATGCATGAATGGTCGGCATATGATTGAGCTACAACCTCAATCAATTCAACACTTGTCTAATCTTCGAACTTTGCGATTGCAAGGTTGGTATTTAGGTGACATCTCTTTCGTGGTAACTTTGACAAAACTTCAAATTCTTGATTTGCAAAGTAGTTGTTTTGAAAGAATGCCAGATGGAATTGAAAAATTAAACAAGCTGAAGTTGTTAGATTTGTCAAGTTGTAGGATAGATGAATGTTGTTACAAAGTAATAAGAAGCTGCTCACAATTAGAAGAGTTGTATGTCTCCAAACATTCTCCACACTCAAAACATGCAAATTGCTATGAATACCTTGTGGGCCCCAGTGTTTTGATGAAACTGAGAAGGTATAACATAGAAATTGGAGGGGATGGCAAGTACTTGGAATTTCATGATCAAGGCACAAGATCCTTATGCTTAGGTCAGTTAAATATGTCTATATTAAGTGCAACAATTAAGGATCTTGCACGAAGAGCAACAATGGTTGAATTTTACGGGCTTGAGGGAGGTGGCAAAAGTTTCATGCCTAATATTGTCCAAGCTACAGGAGGCATGAATCAGTTAACTAAACTCTATCTTGAAAGGTGTTCAGAAATCGAATGCATCACTGATAAAACTACTCCTCATGAAGATGCTATCGTCCCCAGATTGGATGAGTTAGTGCTAAAAGATATGGATAATCTTAAACAACTACATTGTGGTCCTTCTCCTTTTAGCTTGCTCCAAAAGTTAGAACGACTAAGTTTATTCAAATGCCCTCAATTGCTTCACTTATTCCCTGCTGATTGCAACTTAGGCAATCTTAAGTTTCTCAAAATTTCCACCTGTCCGAGGTTGACGTCTCTCATCCCTGTAGCTGTTGCTTGCACTCTATTATCTTTAGAGGAGCTTCAAATAGAATGTTGCAATGGATTGAAGCATGTAATAAAGGGAGAGGGTTATGCTGATACTTGGGAGAATGCGAGACTTCCGAAATTGAACATTTTGTTTATTGAGGATTGTTGCAATTTAGAGTATGTATGCCCAGTCTTTTTAGCTCAAAGGTTTGAAATGCATCATCTATCCATAATAAATGCTCCTCAGATGAAAGCTGTGTTCGGTGAAAATGCTAGTGAAGGACAACCATTGCCGGATCCAGGTGAGACTCAGCTAGTGCTTCCTTTTCTGGAACATCTCAACCTAAGAAGTCTTCCAAATCTTGTGGGAATTTGCTCGGAGAAGTATCATCCAAGGTGGCCATCTATAAAAATAATAGAGTGGAGGGATTGTCCAAAGATGGAACTTAAGGGCCATCAATTGAGGAATGAAGTACAAATTCCAACACTTCAATACATTAAAGAACTAGCTTTGGAAAATTGCACAAGATTGAAATTTGTCTTTTCTGCTCATATTTGTCAAAGTCTTCCAGAGTTAACTTCTGTAATCATATCTCGCTGTGAGGAGTTGGAGGCAATTTTTTTGAGGAATGAAGAGACTCAAAAGAATCCATCCATTTCTGAATCCTCTCTGCTAAAATTGAAAAGCTTGAAAATATTTAAGTGCAACAAGCTTAAATTTGTTTTATCTTTCATGATCAATGCTGCTACCTTGATGCTTCCACAACTATGCACTCTAATCGTATCAGATTCTTCGCAAATGGAAGAAATTTTCAAGTGCTCAAATAGTGAAGATAATGATATTGACAAAAAAAGGGAGATTACATTCCCAAACATGGCATATGTGGAACTTAATAATTTGCCTAGACTTGTGAATGTCTGCCAAGGGTTTAAGTGGTTTAAGTTACACACAAGGGAGTCTTGCATAGTTAAGGTTCACGGCTGCCCAAAACTTTTTCCAGTTATGAGAGCAACCATTAATTGGACTAAAGGGAGACTTGTAAGGGAGTATGAGTTGAAAGGCAGCCAATTAAATAATAACAACGAGGCTCTCAATCTTCCACTTTCTATTCTAAATGCTGGAGAGCTTGATATTCAAAGTCCTATAGTAGAACACAATTGGCGAGTCATTGGTGATGGTCAAGAGCAAGAAGAAACCAACGGCTTAAGTCTTGTTCCCACACAAGTTTTGAGCTTCCAATATGTTCATTCCTTAGAAGCAACTCACATTAAAAAATTGAAGTTTCTATTCTCAATGAGCACTATTGTCAACAAAGGCCTTCCCAAATTGACTTCCTTAACCTTATCTGATTGTGAGGAATTGGAGGTGATTTTTGGACATAGTAGGGCAGAGGATGCCAACGACAACAGTGAGACAATTGTGCTTTCAAGCTTGAGGAAAGTGTGGCTAACGAATTTGCCAAATTTGATGAGTGTTTGTCAAGGGTCGCAGTTTCAGGGGCAGCTGAGCCACATCAGCATACGCAACTGCCCCAAATTTTTGGATTCAAGTTTGGGAAGAGCTCTTCAACAATTGGGAACAATATTGTTTCCGCAGGTTTCAACCGAAGATTCCAATGTTCGAACTTCATCAAATGGAGAAGAACCATTGGCTGGAAATGAAGAAAAAGGGATGATCTTGATTTCAAGAGTAGAGCATTTGTCTGTGGAGGATTCAATCAACCTCATATCCATATGGGAGGATCCCACTTTCATCATCTTCCAAAATCTTGAGGAGTTAGCTGTGATTAATTGTGGAAAACTGAAGTGTATATTCTCTAGCACCGTGATCAGAAACCTACCATGTTTAAAGAGTCTGCGCATTAAAGAATGTGAAGAGTTGGAGGAAATGATGTCATCAGAACATCACTTTCCAGATGCATCCTCAAGTTCCTTCTGCTTCCCATTACTTGAAACTCTTGTTGTCTTTAGATGCAGAAAGTTGAAACGCCTCTTCCCCTCTCTGCCCTCTACTCAACATCATCTTCCACAATTGCGACAGATGACGATTGGAGAGTGCTCTGAACTAAAAGGACTTTATAATTGCGACGAACTTGAAATCCATGAGGAAGGCTTCATCAACAACAAACTTCCAAACCTCACATTTTTTCTGATCAAGAATTGCCCTGTCTTTTCCAACACCACACTTGCTGCTCTTGAAAGGCAGATACGCTGTCGGCTGGGGTTATTGCGATGA 4764 0.3904 MAEVGVSIAAKLAEYLLDPTLQQLQYLFCVGKITRNVEIRKEELILKQRRVQELVQEAINRTERIDDEVDKWKNDVESLIAEVEKLEEELRANNGCHRRWYPTWRRYCLCKKLAKTTQRMIDLNTKSDRFNPFSHPVIIPGIEYHSSKGFMFFESTKKAHDELWAALQDDDSSMIGLWGMGGSGKTTLVKEVGKKVKESKLCDEVIIATVSQTPNIRKIQGEIADLLGLKLEEETEVGRARKIALKLQSSNKRILIILDDVWDTLNLEDIGNPYRDEGPRNCKILLTTRRQEVCTMMDCQKTISLGLLTEGEAWDLFQTHGKVDDGVRKVAQEVVAECKGLPIAIVAMGKCLRRKGLDEMNVVLHRLRHSKPLDEDKAFTCLKLSYDYLRTVEAKLLFLACAMFPEDHEIKIEDLFRYGVGLGLCKDADSFEIARSQVRAAINVLIDSSLLMFSVNFGKEKYVKMHDMVRDVALWVATQENSTIMVNNAKEWNNLIADEVIKDCYAISSWYDNSRLFQSLSQLDAPQLEFLLLHSMKLFDVVHASFERTTGLKALIITCMNGRHMIELQPQSIQHLSNLRTLRLQGWYLGDISFVVTLTKLQILDLQSSCFERMPDGIEKLNKLKLLDLSSCRIDECCYKVIRSCSQLEELYVSKHSPHSKHANCYEYLVGPSVLMKLRRYNIEIGGDGKYLEFHDQGTRSLCLGQLNMSILSATIKDLARRATMVEFYGLEGGGKSFMPNIVQATGGMNQLTKLYLERCSEIECITDKTTPHEDAIVPRLDELVLKDMDNLKQLHCGPSPFSLLQKLERLSLFKCPQLLHLFPADCNLGNLKFLKISTCPRLTSLIPVAVACTLLSLEELQIECCNGLKHVIKGEGYADTWENARLPKLNILFIEDCCNLEYVCPVFLAQRFEMHHLSIINAPQMKAVFGENASEGQPLPDPGETQLVLPFLEHLNLRSLPNLVGICSEKYHPRWPSIKIIEWRDCPKMELKGHQLRNEVQIPTLQYIKELALENCTRLKFVFSAHICQSLPELTSVIISRCEELEAIFLRNEETQKNPSISESSLLKLKSLKIFKCNKLKFVLSFMINAATLMLPQLCTLIVSDSSQMEEIFKCSNSEDNDIDKKREITFPNMAYVELNNLPRLVNVCQGFKWFKLHTRESCIVKVHGCPKLFPVMRATINWTKGRLVREYELKGSQLNNNNEALNLPLSILNAGELDIQSPIVEHNWRVIGDGQEQEETNGLSLVPTQVLSFQYVHSLEATHIKKLKFLFSMSTIVNKGLPKLTSLTLSDCEELEVIFGHSRAEDANDNSETIVLSSLRKVWLTNLPNLMSVCQGSQFQGQLSHISIRNCPKFLDSSLGRALQQLGTILFPQVSTEDSNVRTSSNGEEPLAGNEEKGMILISRVEHLSVEDSINLISIWEDPTFIIFQNLEELAVINCGKLKCIFSSTVIRNLPCLKSLRIKECEELEEMMSSEHHFPDASSSSFCFPLLETLVVFRCRKLKRLFPSLPSTQHHLPQLRQMTIGECSELKGLYNCDELEIHEEGFINNKLPNLTFFLIKNCPVFSNTTLAALERQIRCRLGLLR 1587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1293g00006 1587 Coils Coil 55 96 - -
Pral1293g00006 1587 Gene3D - 307 385 IPR042197 -
Pral1293g00006 1587 Gene3D Ribonuclease Inhibitor 1396 1577 IPR032675 -
Pral1293g00006 1587 Gene3D Ribonuclease Inhibitor 1194 1382 IPR032675 -
Pral1293g00006 1587 Gene3D Ribonuclease Inhibitor 735 913 IPR032675 -
Pral1293g00006 1587 Gene3D Ribonuclease Inhibitor 949 1135 IPR032675 -
Pral1293g00006 1587 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 401 IPR027417 -
Pral1293g00006 1587 Gene3D - 145 304 IPR027417 -
Pral1293g00006 1587 SUPERFAMILY RNI-like 1407 1573 - -
Pral1293g00006 1587 FunFam Probable disease resistance protein At1g61300 153 302 - -
Pral1293g00006 1587 SUPERFAMILY RNI-like 950 1114 - -
Pral1293g00006 1587 Pfam NB-ARC domain 158 387 IPR002182 GO:0043531
Pral1293g00006 1587 FunFam Probable disease resistance protein At1g63360 386 475 - -
Pral1293g00006 1587 Gene3D - 386 474 IPR036388 -
Pral1293g00006 1587 Gene3D Ribonuclease Inhibitor 503 675 IPR032675 -
Pral1293g00006 1587 PRINTS Disease resistance protein signature 174 189 - -
Pral1293g00006 1587 PRINTS Disease resistance protein signature 338 352 - -
Pral1293g00006 1587 PRINTS Disease resistance protein signature 248 262 - -
Pral1293g00006 1587 PRINTS Disease resistance protein signature 619 635 - -
Pral1293g00006 1587 SUPERFAMILY L domain-like 464 982 - -
Pral1293g00006 1587 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 915 1114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1293g00006 Pral-Chr1293 118806 128949 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1293g00006 171 587 WRKY Transcription Factor Family AT5G45050 24.356 1.51e-15 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1293g00006 - - pcin:129317821 1378.23