Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1293g00003 ATGGCAGAGGTGGGAGTGTCGGTAGCTGCAAAACTTGCTGAGTATTTGGTGGATCCAACTTTACAGCAGCTGCAATATTTGTTCTGTGACGGAAAAATCACCAGAAATGTTGAGATCAGAAAGGAGGAACTGATATTGAAGCAAGGGAGGGTGCAAAAAGATGTTCAAGGGGCCATCAACAGGACCGAAAGGATATATGACGAGGTTAACAAGTGGAAGAATGACGTGAAGACCCTAATAGCAGAGGTGGAGAAACTGGAGGAAGAACTAAGGGCCAACAATGGCTGCCTTCGAGGGTGGTGTCCCACTTGGAGGAGATATTGTCTCTGCAAAAGGTTGGCTAAAACAACACAGAGGATGATTGATCTAAATACAAACTGTGGTCGCTTCAATGAAGTTTCCCATCCTGTTATTGCTCCAAATATAGAATTCCTCTCTTCTCAAAGCTTCAAGTTCTTCAACTCTACACAAATAGCTTTTGATCAGTTGTGGGAGGCATTGCAAGATGACGATAGCTCCATGATTGGGATACGGGGCATGGGAGGGTCAGGGAAAACCTCCTTGATGAGAGTAGTGGAAAAGAAAGCCGAGGAGTCACAGCTCTTTAATCGAGTTGTGTTCACTGCAGTTTCTCAAAGCGTAAATATAAGAAAACTTCAAGGTGAAATTGCTGATGCGTTGGGGCTCGAATTGAAGGAAGAATCTGAAACGGGAAGAGCAAAAAGAATAGCACTACGATTACACAGTGGAGAACGAATTTTGATAATACTGGATGATGTATGGGCCATGCTGAATCTTGAGGACATAGGGATTCCCGTGGGGGTAAATCATCAAAGAAGTTTCAAAGTTGTCCTAACCACACGCAGTCTTGATGTATGTATTTTGATGAAATGCCAAAAGAGGATTCAACTTGATTTGTTAAAAGAAGATGAAGCTTGGACTTTGTTTCAAACTCATGCTAATGTCAACGATGCTGCTAAAGAAGATATGGCACGACAAATTGCAATGGAATGTAAGGGCCTACCCATTGCAATTGTAGCTGTGGGAACTTGCTTGAAAGAAAAAGGAGTTGATGAGATGAATGTAATGTTATATCAGTTGAGGAATGCAAAATCAACTAATGTGAATAAAGGAGTGAGGGATGCTTTTGCTTGTCTTAAATTAAGCTATGATTATTTGGCAACCCCAGAAGCGAAGTTGTTGTTGTTAATGTGTGCTATGTTTCCTGAAGATCATAATATTGGTGTTGAAGACCTTTTCAGGTATGGAGTGGGTTTAGGCCTATGTGAAGATGTAGACTTATTTGAAATAGCAAGAAGCCAAGTTAGAGCAACTGTAAATTATCTCATTAACTCCTCGTTGTTGATGCATTCTTCAAAATTCAACATAGAGTCACAAAAATATGTGATAATGCATGATATGGTTCGTGATTTTGCATTATGGAAAGCATCTGAAGAGGATCATATCATTAAGGTAAATTGCAGAAAACAATCGAATGAATTGATTGCTGATGAAGTGGTGAAAAATTGTTATGCTGTATCTTCATGGTATGAGGACAATAAATTATTTCAATTTCCCTCTCAGTTGGATGCTCCAAAGCTTGAGTTTCTATTGTTACGTTTAAGACAACCCTTGGACATATCACATGCATCATTTGAAGGCACCAAAGGACTGAAGGTGTTAATTATTAGGTCCTCCTATTTTGGGCCCAAGGTTCGACTATTACAACCTCAATCAATCCAACACTTGTCCAATCTTCGAACTTTGCGATTGCAAGGCTGGAATTTACTTGACATCTCTTTTTTGGTAAGCCTTACAAGACTTGAAATTGTTGACTTGCAAAGGAGTAAGTTTAAGAGAATGCCGAATGGAATTGAAAATTTAAACAAGCTGAAGTTGTTAGATTTGTCATATTGTAACATAGGTGAATGTTGTTACCAAGTAATAGGAAGGTGCTCCCAGTTAGAAGAGTTGTATGTTTCCACACATTTTCCAAAGTCAAAAAATGCAAAATGCTATGAATGCCTTATGGCCCCCATTGCTTTGATGAAACTGAGAAGGTATAGGATAGAAATTGGGGGGCGTAACATAGGCTTGATACCTCAAAATGAAAGTGCAAGATATTTACGCTTTGTTCAGTTAAATATCGCCATGCTAGGTGTAGGAATCAAGGATCTTGCACAAATAGCAACTGCAATTGAATGTTATAAGCTTAAGGGAGGCAGCAGAAGTTTCATGCCTAATGTAGTTCAAGCTAGCGGAGGCATGAATGAGTTATCTAAACTCTATCTTAGAAGGTGTTCAGAGATGGAATGCATTATTGACAAAAGTAATGCTCATGAAGATGCGATTGCCCCAAGATTGGGTGAGTTAGTGCTAACAGACATGGATAATCTTCAACAACTACATCGTGGTCCTTCTTCTGTTAGCTTGTTCCAAAAGCTAGAAACACTAACTATATCCAATTGCCCTCAGTTGCTCCACATATTCCCTGCCGATTGCAACTTAGGCAATCTTAAGTTTCTCAATATTTTCAGTTGTCCGAGGTTGACATCTCTCTTCACTATCTCTACTATGTGCACTTTGTTGTCCTTACAAGAGCTCCGAATAGAAAGTTGCAGTGAACTGAAGCATGTATTAGAGGGAGAGGGTGATGGTGATGCATGGGAGAATTCTAGATTCCCAAAATTGAAAATTTTGTCTATTGATAAATGCCGCAAATTAGAATCTGTATGCCCGGTCTTTTTAGCTCAAAGGTTTGTACAATTGCAGCGTCTATCCATAACAACTGCTCCTCAGATGAAATTTGTGTTCGGTGAAAATGCTGATGAAGAACAACCACTACGTGACCAAGATGAGACTCAAATAGCTCTTTCTCTTTTGGAATACCTCACACTAACAAATCTTCCAAACCTTGTCGGAATTTGCTCAAAGAGGTATCATCTACGGTGGCTATCTATAAAGACAATAGAAGGGGAGAATTGTCCAAATCTGGTACGTGCTGCCTCACATATTGTGATTTGA 3024 0.3962 MAEVGVSVAAKLAEYLVDPTLQQLQYLFCDGKITRNVEIRKEELILKQGRVQKDVQGAINRTERIYDEVNKWKNDVKTLIAEVEKLEEELRANNGCLRGWCPTWRRYCLCKRLAKTTQRMIDLNTNCGRFNEVSHPVIAPNIEFLSSQSFKFFNSTQIAFDQLWEALQDDDSSMIGIRGMGGSGKTSLMRVVEKKAEESQLFNRVVFTAVSQSVNIRKLQGEIADALGLELKEESETGRAKRIALRLHSGERILIILDDVWAMLNLEDIGIPVGVNHQRSFKVVLTTRSLDVCILMKCQKRIQLDLLKEDEAWTLFQTHANVNDAAKEDMARQIAMECKGLPIAIVAVGTCLKEKGVDEMNVMLYQLRNAKSTNVNKGVRDAFACLKLSYDYLATPEAKLLLLMCAMFPEDHNIGVEDLFRYGVGLGLCEDVDLFEIARSQVRATVNYLINSSLLMHSSKFNIESQKYVIMHDMVRDFALWKASEEDHIIKVNCRKQSNELIADEVVKNCYAVSSWYEDNKLFQFPSQLDAPKLEFLLLRLRQPLDISHASFEGTKGLKVLIIRSSYFGPKVRLLQPQSIQHLSNLRTLRLQGWNLLDISFLVSLTRLEIVDLQRSKFKRMPNGIENLNKLKLLDLSYCNIGECCYQVIGRCSQLEELYVSTHFPKSKNAKCYECLMAPIALMKLRRYRIEIGGRNIGLIPQNESARYLRFVQLNIAMLGVGIKDLAQIATAIECYKLKGGSRSFMPNVVQASGGMNELSKLYLRRCSEMECIIDKSNAHEDAIAPRLGELVLTDMDNLQQLHRGPSSVSLFQKLETLTISNCPQLLHIFPADCNLGNLKFLNIFSCPRLTSLFTISTMCTLLSLQELRIESCSELKHVLEGEGDGDAWENSRFPKLKILSIDKCRKLESVCPVFLAQRFVQLQRLSITTAPQMKFVFGENADEEQPLRDQDETQIALSLLEYLTLTNLPNLVGICSKRYHLRWLSIKTIEGENCPNLVRAASHIVI 1007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1293g00003 1007 FunFam Probable disease resistance protein At1g61300 145 301 - -
Pral1293g00003 1007 Coils Coil 69 93 - -
Pral1293g00003 1007 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 144 404 IPR027417 -
Pral1293g00003 1007 PRINTS Disease resistance protein signature 247 261 - -
Pral1293g00003 1007 PRINTS Disease resistance protein signature 626 642 - -
Pral1293g00003 1007 PRINTS Disease resistance protein signature 174 189 - -
Pral1293g00003 1007 PRINTS Disease resistance protein signature 338 352 - -
Pral1293g00003 1007 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 35 938 - -
Pral1293g00003 1007 Pfam NB-ARC domain 160 391 IPR002182 GO:0043531
Pral1293g00003 1007 Gene3D - 390 482 IPR036388 -
Pral1293g00003 1007 Gene3D - 147 303 IPR027417 -
Pral1293g00003 1007 Gene3D Ribonuclease Inhibitor 806 1005 IPR032675 -
Pral1293g00003 1007 SUPERFAMILY L domain-like 471 985 - -
Pral1293g00003 1007 Gene3D - 306 389 IPR042197 -
Pral1293g00003 1007 Gene3D Ribonuclease Inhibitor 483 683 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1293g00003 Pral-Chr1293 72250 75273 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1293g00003 175 638 WRKY Transcription Factor Family AT5G45050 22.561 1.61e-06 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1293g00003 - - pcin:129317508 1145.18