Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral128g00009 ATGGTTCGCTCCAATGGCGTCAGACTGATTCGATGGGCTGCTCGTCGATCTCTTGCGTCAAACTACCTTCGTGACGCTGCGAACGACATACACGAGGCTGTGTCCCAAAGAGGCTACAAGACATTGCATTCAGGGATTTGCAAGCCGTCTAGAATTACTGGAAGTTACGCTTCAAACGTTGGAGATGCTTTTACTATGCAGAATCGGTTGCTATTGGGAGCAGTGAATACATATTGGGGCACAACTAGATCCATTCATGGCACGGCTTCATTGGCGAGAGATTATTATGATGTTCTTGGTGTGAGTAAGAATGCAAGCGCATCTGAAATAAAGAAAGCATACTATGGGCTTGCAAAGAAGCTCCATCCAGACACAAACAAAGATGATCCTGAGGCTGAAAAGAAGTTTCAAGAAGTTTCGATGGCATATGAGGTATTGAAGGATGAGGAAAAGCGGCAACAATATGATCAGGTTGGCCATGATGCCTACGTAAATCAACAAAGCAATGGTTTTGGAGGAGATGCTGGCTTTAATCCATTTGAGCAGATATTCCGTGATCATGATTTTGTCAAGAACTTTTTTCATCAAGGTGTTGGTGGAGAGGATGTCAAGACCTTTGTTGAACTATCATTTATGGAAGCTGTTCAAGGATGCACCAAAACTGTGTCATTTCAAACTGATGTGCTTTGTAATGCTTGTGGTGGTAGTGGTGTTCCTCCTGGAACAAGACCTGAAACTTGCAAACGCTGTAAAGGGTCTGGGGTGAATTATGTACAAGCTGGAATATTCAGGATGGAGAGTACCTGCACCACATGCAAGGGAACTGGAAAAATTGTATCGGTATGA 846 0.4374 MVRSNGVRLIRWAARRSLASNYLRDAANDIHEAVSQRGYKTLHSGICKPSRITGSYASNVGDAFTMQNRLLLGAVNTYWGTTRSIHGTASLARDYYDVLGVSKNASASEIKKAYYGLAKKLHPDTNKDDPEAEKKFQEVSMAYEVLKDEEKRQQYDQVGHDAYVNQQSNGFGGDAGFNPFEQIFRDHDFVKNFFHQGVGGEDVKTFVELSFMEAVQGCTKTVSFQTDVLCNACGGSGVPPGTRPETCKRCKGSGVNYVQAGIFRMESTCTTCKGTGKIVSV 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral128g00009 281 Pfam DnaJ central domain 230 279 IPR001305 GO:0031072|GO:0051082
Pral128g00009 281 PRINTS DnaJ domain signature 151 170 IPR001623 -
Pral128g00009 281 PRINTS DnaJ domain signature 131 151 IPR001623 -
Pral128g00009 281 PRINTS DnaJ domain signature 96 114 IPR001623 -
Pral128g00009 281 PRINTS DnaJ domain signature 114 129 IPR001623 -
Pral128g00009 281 Gene3D - 204 229 - -
Pral128g00009 281 CDD DnaJ 94 148 IPR001623 -
Pral128g00009 281 FunFam Chaperone protein dnaJ GFA2, mitochondrial 91 202 - -
Pral128g00009 281 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 217 279 IPR036410 -
Pral128g00009 281 Gene3D - 230 279 - -
Pral128g00009 281 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 50 280 - -
Pral128g00009 281 Pfam DnaJ domain 94 156 IPR001623 -
Pral128g00009 281 ProSiteProfiles Zinc finger CR-type profile. 217 281 IPR001305 GO:0031072|GO:0051082
Pral128g00009 281 ProSiteProfiles dnaJ domain profile. 94 159 IPR001623 -
Pral128g00009 281 SMART dnaj_3 93 151 IPR001623 -
Pral128g00009 281 SUPERFAMILY Chaperone J-domain 93 197 IPR036869 -
Pral128g00009 281 CDD DnaJ_zf 230 280 IPR001305 GO:0031072|GO:0051082
Pral128g00009 281 FunFam Molecular chaperone DnaJ 222 281 - -
Pral128g00009 281 ProSitePatterns Nt-dnaJ domain signature. 136 155 IPR018253 -
Pral128g00009 281 Gene3D DnaJ domain 91 203 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral128g00009 Pral-Chr128 42585 47023 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral128g00009 88 156 C2H2 Transcription Factor Family AT1G74250 41.892 3.80e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral128g00009 K03686 - gmx:100799735 461.455