Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1288g00013 ATGTTGGGCTCAAACACCAATTTGGTGACCACGGTAATTGGATTTGGCATGAGTGCGACTTTTATTGTGTTTGTCTGTACAAGAATAATCTGTGGAAGGCTGCGAGGGTCCTCGGAATCTCATAATATGTTTGAATTTGAACCTAGGATGGACATAGAACAGCCAGAACATCTTGTTAACCGCTCAGAACCTGTTCTTGTTACTGCAATTCCCACCATGAAGTTCAACCGAGAGGCTTTCAGTTCTAGTGAAAATACACAGTGTGTGATCTGTTTGGCAGAGTACAAAGAAAGAGAGGTACTGCGCATCATGCCAAAATGTGGTCATAGCTTCCATCTTTCCTGTATTGATATGTGGCTGAGGAAACAATCCACCTGCCCGGTATGCCGTCTTCCATTGCAGAATTCTTCTGAAACAAAGCATATGAGACCGGTAACGTTTAGCTTAGGGCAAGGTGACTCTCAGACTTCTGAAAGTGGAGATATTGAGAGGAATATTGAACCTGTGCCGGGGAATCCCTTGTCCTTAGAGGAATCAGATGCGGCAGAAGCGGAAACAAGGCAATGA 567 0.4444 MLGSNTNLVTTVIGFGMSATFIVFVCTRIICGRLRGSSESHNMFEFEPRMDIEQPEHLVNRSEPVLVTAIPTMKFNREAFSSSENTQCVICLAEYKEREVLRIMPKCGHSFHLSCIDMWLRKQSTCPVCRLPLQNSSETKHMRPVTFSLGQGDSQTSESGDIERNIEPVPGNPLSLEESDAAEAETRQ 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1288g00013 188 MobiDBLite consensus disorder prediction 142 188 - -
Pral1288g00013 188 MobiDBLite consensus disorder prediction 142 162 - -
Pral1288g00013 188 SUPERFAMILY RING/U-box 79 136 - -
Pral1288g00013 188 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 64 140 IPR013083 -
Pral1288g00013 188 SMART ring_2 88 129 IPR001841 -
Pral1288g00013 188 ProSiteProfiles Zinc finger RING-type profile. 88 130 IPR001841 -
Pral1288g00013 188 PANTHER OS11G0150450 PROTEIN 1 157 - -
Pral1288g00013 188 Pfam Ring finger domain 87 130 IPR001841 -
Pral1288g00013 188 CDD RING-H2_EL5-like 87 130 - -
Pral1288g00013 188 FunFam Putative RING zinc finger domain superfamily protein 64 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1288g00013 Pral-Chr1288 28905 31075 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1288g00013 8 160 C3H Transcription Factor Family AT1G72220 30.000 1.28e-19 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1288g00013 - - gmx:100790202 273.863