Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1284g00159 ATGAAGTTGATCGCTGCTTATTTGCTCGCTGTTTTGGGCGGGAACACCTGTCCGTCCTCTGCTGATCTCAAGGGCATACTTGGATCTGTGGGAGCAGAGGTTGACGATGACAGGATTGAAATTCTTCTGTCTGAAGTCAAGGGCAAAGACATAACTGAGCTGATCGCCAGCGGTAGGGAAAAGTTGGCCTCTGTGCCTTCTGGCGGTGGTGCAGCAGTTGCAATGGCCGCCACACCTGGCGGTGCTGGTGGCGCTGCCGCTCCAGCGGCAGCCGAGCCAAAGAAGGAAGAGAAGGTTGAGGAGAAAGAGGAATCCGATGATGACATGGGCTTCAGTCTCTTTGATTGA 348 0.5402 MKLIAAYLLAVLGGNTCPSSADLKGILGSVGAEVDDDRIEILLSEVKGKDITELIASGREKLASVPSGGGAAVAMAATPGGAGGAAAPAAAEPKKEEKVEEKEESDDDMGFSLFD 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1284g00159 115 Hamap 50S ribosomal protein L12 [rpl12]. 2 115 IPR027534 GO:0003735|GO:0005840|GO:0006414
Pral1284g00159 115 Pfam 60s Acidic ribosomal protein 18 114 - -
Pral1284g00159 115 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER 1 115 IPR044076 GO:0002182|GO:0003735|GO:0022625
Pral1284g00159 115 Gene3D - 1 59 IPR038716 -
Pral1284g00159 115 CDD Ribosomal_P2 1 115 IPR044076 GO:0002182|GO:0003735|GO:0022625
Pral1284g00159 115 MobiDBLite consensus disorder prediction 77 115 - -
Pral1284g00159 115 FunFam 60S acidic ribosomal protein P2 1 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1284g00159 Pral-Chr1284 804976 806138 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1284g00159 1 115 Cytoplasmic Ribosomal Protein Gene Family AT3G44590 65.217 8.14e-32 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1284g00159 K02943 - qsu:112012262 134.806