Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1284g00156 ATGGAATCAGAGAAGCGCTTTGCAAGCAGCTCTGCTTCTACGTCCGCGTGGGCGGAGAGGTTGGGTGGCGAGGCGGATCGGTTGGTTAAGACGGAGATTGAAGCGGCGGAGACTCTCGCAGACTTGGCCCGCTTGGCGATGCGTGAGACTGCCTCTGACTCCGGAGAGAAACAGTGCAAGAAAGGCAAACAAGGCAAGAGGCGGCTCTCCTGCGAGTCACCGACTGATGACTCGGGGTTGAACGGGCTCGACTCAGCCTCCAAATGTCCGGATCTCTCTCGGGATCAAGCTGTTGAAGGTCACCAGCCACATCAAATATCCGCAAGTGAAACGAAAAAGATTCAACAGGATGTCTGCTTAAGAGAAGTGAAGACGGAGCAGGATGCTGATTTAGCCAAGACAAGCACCGTGTGCACAAGTTACTCTTTGGTTGGCTGCAGTAAGTCAAGGCGAAATTTAACTGAGGAAGAAAAGGAGGCACGGAGGATACGCAGGGTATTGGCAAATAGGGAGTCAGCTAGGCAGACAATTCGCCGTAGGCAGGCACTCTGTGAGGAGTTAACCAGAAAAGCTGCCAATTTGGCGCTGGAGAATGAAAGCCTGAAAAAGGAGAAGGAGTTGGCTTTGAAAGAGTACCAATCTTTGGAGAACACAAATAAGCACTTGAAGGCACAAATAGCCAAGTCAGTGAATACCATGGCGGATAAAACTCCAGATGAGCATGACTTGCCTGCATCTGAGATTACGTCTTCATCCACGAGTAGTGGTCCATGGTTCCTTTGTAGCCATTTCCCAGTAACACAGTTATTTTGGCCTTCTGTCATCCAGTCTTCCAATCCTGTTCAATCTCAGCATACGCCTCATGGTTCCGCACCCATACCATCAAATATTTCTTTACCGTTTTCTTCTGAGTCTGACTTATGCCACAAAGAAAATAACCTTATACAGGACAATGAAATACAAAATCCATTATACCTGTTTCCGTATCCTTGGTTCTTCCCACCTCCAGAGTCTGGACATGGACAGGCGCCACTCTCTGTTGGCCTTAAAAATAAACAAGATGGGTATCCTGTAGGTAAACCATGTAGTATTAATTCAACTCCAAATACAGTGACAAATAATGACAATCAGGCTACTTTACCTTTCAAAATTAAAACAGAAGCTTCTGGCTGGACAGAAGTCAGACCTATTGATGACCCAAATCACGCCACTCCTAATTTTTCTTTGGATGGAGATGAGCAGCAAAGAGGATGTCACATTATGGAAAGATATCATCCTGCTGTTGTCAAGGAAGAACATGGCTTTAAGATACATCCTGCACCCGATACTGAGCTGAGGCAAGGAAGAGGAGAAAGGAGCTTACAAAGCTGA 1371 0.469 MESEKRFASSSASTSAWAERLGGEADRLVKTEIEAAETLADLARLAMRETASDSGEKQCKKGKQGKRRLSCESPTDDSGLNGLDSASKCPDLSRDQAVEGHQPHQISASETKKIQQDVCLREVKTEQDADLAKTSTVCTSYSLVGCSKSRRNLTEEEKEARRIRRVLANRESARQTIRRRQALCEELTRKAANLALENESLKKEKELALKEYQSLENTNKHLKAQIAKSVNTMADKTPDEHDLPASEITSSSTSSGPWFLCSHFPVTQLFWPSVIQSSNPVQSQHTPHGSAPIPSNISLPFSSESDLCHKENNLIQDNEIQNPLYLFPYPWFFPPPESGHGQAPLSVGLKNKQDGYPVGKPCSINSTPNTVTNNDNQATLPFKIKTEASGWTEVRPIDDPNHATPNFSLDGDEQQRGCHIMERYHPAVVKEEHGFKIHPAPDTELRQGRGERSLQS 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1284g00156 456 MobiDBLite consensus disorder prediction 49 91 - -
Pral1284g00156 456 MobiDBLite consensus disorder prediction 1 26 - -
Pral1284g00156 456 MobiDBLite consensus disorder prediction 50 73 - -
Pral1284g00156 456 Coils Coil 170 232 - -
Pral1284g00156 456 Pfam bZIP transcription factor 157 219 IPR004827 GO:0003700|GO:0006355
Pral1284g00156 456 MobiDBLite consensus disorder prediction 1 17 - -
Pral1284g00156 456 PANTHER G-BOX-BINDING FACTOR 3-RELATED 46 255 IPR044827 GO:0003700|GO:0006355|GO:0043565
Pral1284g00156 456 SUPERFAMILY Leucine zipper domain 161 217 IPR046347 GO:0003700|GO:0006355
Pral1284g00156 456 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 159 222 IPR004827 GO:0003700|GO:0006355
Pral1284g00156 456 SMART brlzneu 157 221 IPR004827 GO:0003700|GO:0006355
Pral1284g00156 456 CDD bZIP_plant_GBF1 162 213 IPR045314 GO:0003700|GO:0006355
Pral1284g00156 456 MobiDBLite consensus disorder prediction 436 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1284g00156 Pral-Chr1284 799510 803851 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1284g00156 47 412 bZIP Transcription Factor Family AT1G19490 38.462 5.31e-55 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pral1284g00156 bZIP_1 4.5e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1284g00156 - - pcin:129305693 660.603