Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1284g00152 ATGGCGGAAGAGCACAGATGCCAAGCTCCAGAAGGCCACCGACTCTGTGCTAATAACTGCGGCTTCTTCGGCAGCCCGGCCACCATGAATCTCTGCTCCAAGTGCTACAGGGATTTCCATTTGAAGGAGCAGCAAGAAGCCTCCACCAGATCCACCATCGAAACCGCCCTCTCCTCCCCTGCCGTGCCGTCCTCGGGGTCAACTCTGTTTCCGGGCCCGGAGCCTCCCGTTCCTGCGCCGATGTTATCATTGCCGGCAGTTGCAGTAGATGCGTCGAGCTCGGCTGCTGCATCCTCCGGGCCGGAAGTGGCGACCGCGCAACCGAACCGATGCGCTACATGCCGGAAACGGGTCGGGCTGGCGGGATTCAAGTGCAAGTGCGGTGTCACGTTTTGTGGAACCCACAGGTATCCTGAGAAACACGGGTGTGGCTTCGATTTCAAGAAGGTGGGCCGAGAGGAAATAGCTCGGGCAAACCCTCTGATCAAGGCTAAGAAGCTCGAAAGGATCTAA 513 0.5867 MAEEHRCQAPEGHRLCANNCGFFGSPATMNLCSKCYRDFHLKEQQEASTRSTIETALSSPAVPSSGSTLFPGPEPPVPAPMLSLPAVAVDASSSAAASSGPEVATAQPNRCATCRKRVGLAGFKCKCGVTFCGTHRYPEKHGCGFDFKKVGREEIARANPLIKAKKLERI 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1284g00152 170 FunFam Zinc finger AN1-type containing 6 86 166 - -
Pral1284g00152 170 ProSiteProfiles Zinc finger AN1-type profile. 105 151 IPR000058 GO:0008270
Pral1284g00152 170 SUPERFAMILY AN1-like Zinc finger 99 165 IPR035896 -
Pral1284g00152 170 PANTHER AN1-TYPE ZINC FINGER PROTEIN 13 170 - -
Pral1284g00152 170 MobiDBLite consensus disorder prediction 50 76 - -
Pral1284g00152 170 Pfam A20-like zinc finger 14 37 IPR002653 GO:0003677|GO:0008270
Pral1284g00152 170 SMART A20_3 13 37 IPR002653 GO:0003677|GO:0008270
Pral1284g00152 170 MobiDBLite consensus disorder prediction 50 66 - -
Pral1284g00152 170 ProSiteProfiles Zinc finger A20-type profile. 10 44 IPR002653 GO:0003677|GO:0008270
Pral1284g00152 170 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 15 56 - -
Pral1284g00152 170 Pfam AN1-like Zinc finger 111 147 IPR000058 GO:0008270
Pral1284g00152 170 SMART AN1_Zf_4 111 148 IPR000058 GO:0008270
Pral1284g00152 170 Gene3D - 1 61 - -
Pral1284g00152 170 Gene3D - 87 166 IPR035896 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1284g00152 Pral-Chr1284 781787 784075 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1284g00152 1 170 C2H2 Transcription Factor Family AT3G52800 56.322 1.04e-54 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1284g00152 - - lang:109347531 236.113